| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AC209374.4_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.79404 x 10-2 | 96 | 53 | 105 | 77 | 64.43% | 42.31% | 149 | 182 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004272' χ2 p-value for Mo17 x B73: '.0379404' Biased in favor of strain: 'B73' |
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| AC209374.4_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.8163 x 10-2 | 43 | 8 | 27 | 29 | 84.31% | 51.79% | 51 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0075093' χ2 p-value for Mo17 x B73: '.018163' Biased in favor of strain: '' |
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| AC209356.4_FG001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 19 | 3 | 13.64% | 0 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC209356.4_FG001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 34 | 1 | 100.00% | 2.86% | 6 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '2.43e-08' Biased in favor of strain: '' |
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| AC209257.4_FG008 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.574625 x 10-1 | 169 | 117 | 138 | 141 | 59.09% | 50.54% | 286 | 279 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0021063' χ2 p-value for Mo17 x B73: '.8574625' Biased in favor of strain: '' |
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| AC209257.4_FG008 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.34 x 10-4 | 23 | 37 | 37 | 144 | 38.33% | 79.56% | 60 | 181 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.23e-06' χ2 p-value for Mo17 x B73: '.000234' Biased in favor of strain: 'Mo17' |
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| AC209257.4_FG006 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.807486 x 10-1 | 13 | 3 | 21 | 31 | 81.25% | 59.62% | 16 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2159304' χ2 p-value for Mo17 x B73: '.2807486' Biased in favor of strain: '' |
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| AC209257.4_FG006 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.083652 x 10-1 | 9 | 8 | 17 | 8 | 52.94% | 32.00% | 17 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8083652' χ2 p-value for Mo17 x B73: '.0718606' Biased in favor of strain: '' |
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| AC209257.4_FG004 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| AC209257.4_FG004 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 4 | 0.00% | 80.00% | 1 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: '' |
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| AC209257.4_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 4 | 1 | 100.00% | 20.00% | 10 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: '' |
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| AC209257.4_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.67 x 10-5 | 39 | 1 | 23 | 2 | 97.50% | 8.00% | 40 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.87e-09' χ2 p-value for Mo17 x B73: '.0000267' Biased in favor of strain: 'B73' |
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| AC209213.4_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 6 | 0.00% | 100.00% | 2 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| AC209213.4_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 1 | 0.00% | 100.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| AC209208.3_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.124552 x 10-1 | 63 | 29 | 36 | 78 | 68.48% | 68.42% | 92 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7124552' χ2 p-value for Mo17 x B73: '.6911026' Biased in favor of strain: '' |
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| AC209208.3_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.206 x 10-4 | 106 | 47 | 94 | 53 | 69.28% | 36.05% | 153 | 147 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.84e-06' χ2 p-value for Mo17 x B73: '.0007206' Biased in favor of strain: 'B73' |
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| AC209208.3_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 460 | 139 | 514 | 122 | 76.79% | 19.18% | 599 | 636 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| AC209208.3_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.01581 x 10-2 | 25 | 24 | 11 | 1 | 51.02% | 8.33% | 49 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0201581' χ2 p-value for Mo17 x B73: '.0000181' Biased in favor of strain: '' |
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| AC209208.3_FG001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | PEG | 0.0 | 7 | 283 | 393 | 10 | 2.41% | 2.48% | 290 | 403 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| AC209208.3_FG001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.913401 x 10-1 | 145 | 136 | 125 | 86 | 51.60% | 40.76% | 281 | 211 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5913401' χ2 p-value for Mo17 x B73: '.0072558' Biased in favor of strain: '' |
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| AC209206.3_FG014 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 36 | 0 | 0 | 4 | 100.00% | 100.00% | 36 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.97e-09' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| AC209206.3_FG014 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 2.6998 x 10-3 | 79 | 0 | 0 | 18 | 100.00% | 100.00% | 79 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.28e-10' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| AC209206.3_FG011 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.77876 x 10-2 | 100 | 31 | 57 | 86 | 76.34% | 60.14% | 131 | 143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0188947' χ2 p-value for Mo17 x B73: '.0977876' Biased in favor of strain: '' |
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| AC209206.3_FG011 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.73138 x 10-1 | 175 | 178 | 190 | 200 | 49.58% | 51.28% | 353 | 390 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.873138' χ2 p-value for Mo17 x B73: '.6125972' Biased in favor of strain: '' |
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| AC209050.3_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 0 | 1 | 60.00% | 100.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| AC209050.3_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| AC209016.3_FG010 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 1 | 0 | 100.00% | 0.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| AC209016.3_FG010 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 2 | 0 | 100.00% | 0.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| AC208916.3_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3625 x 10-3 | 33 | 5 | 32 | 11 | 86.84% | 25.58% | 38 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.57e-06' χ2 p-value for Mo17 x B73: '.0013625' Biased in favor of strain: 'B73' |
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| AC208916.3_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.36349 x 10-2 | 4 | 6 | 1 | 15 | 40.00% | 93.75% | 10 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0736349' χ2 p-value for Mo17 x B73: '.0215563' Biased in favor of strain: '' |
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| AC208897.3_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 2 | 8 | 40.00% | 80.00% | 5 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2058979' χ2 p-value for Mo17 x B73: '.3710935' Biased in favor of strain: '' |
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| AC208897.3_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.81 x 10-11 | 131 | 44 | 122 | 36 | 74.86% | 22.78% | 175 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.81e-11' χ2 p-value for Mo17 x B73: '7.82e-12' Biased in favor of strain: 'B73' |
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| AC208892.3_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| AC208892.3_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC208724.3_FG001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 3 | 60.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC208724.3_FG001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 6 | 2 | 1 | 25.00% | 33.33% | 8 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| AC208711.3_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 1 | 0 | 0.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| AC208711.3_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 5 | 3 | 100.00% | 37.50% | 2 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: '' |
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| AC208576.3_FG001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 2 | 2 | 100.00% | 50.00% | 3 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| AC208576.3_FG001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.854947 x 10-1 | 26 | 28 | 21 | 16 | 48.15% | 43.24% | 54 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7854947' χ2 p-value for Mo17 x B73: '.4110798' Biased in favor of strain: '' |
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| AC208571.4_FG001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1553 x 10-3 | 61 | 30 | 56 | 25 | 67.03% | 30.86% | 91 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011553' χ2 p-value for Mo17 x B73: '.0005722' Biased in favor of strain: 'B73' |
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| AC208571.4_FG001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.3129 x 10-3 | 59 | 12 | 57 | 25 | 83.10% | 30.49% | 71 | 82 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0033129' χ2 p-value for Mo17 x B73: '3.66e-12' Biased in favor of strain: 'B73' |
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| AC208559.3_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.13 x 10-9 | 0 | 53 | 0 | 67 | 0.00% | 100.00% | 53 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.37e-25' χ2 p-value for Mo17 x B73: '7.13e-09' Biased in favor of strain: 'Mo17' |
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| AC208559.3_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.06 x 10-20 | 1 | 90 | 0 | 109 | 1.10% | 100.00% | 91 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.06e-20' χ2 p-value for Mo17 x B73: '1.62e-25' Biased in favor of strain: 'Mo17' |
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| AC208539.3_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 7 | 4 | 0 | 0.00% | 0.00% | 7 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| AC208539.3_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | PEG | 6.24 x 10-21 | 1 | 53 | 46 | 1 | 1.85% | 2.13% | 54 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.32e-24' χ2 p-value for Mo17 x B73: '6.24e-21' Biased in favor of strain: '' |
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| AC208440.3_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.456802 x 10-1 | 320 | 155 | 203 | 432 | 67.37% | 68.03% | 475 | 635 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7456802' χ2 p-value for Mo17 x B73: '.4656492' Biased in favor of strain: '' |
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| AC208440.3_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.4 x 10-11 | 376 | 195 | 335 | 184 | 65.85% | 35.45% | 571 | 519 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.60e-14' χ2 p-value for Mo17 x B73: '3.40e-11' Biased in favor of strain: 'B73' |
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| AC208436.3_FG007 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.073124 x 10-1 | 180 | 113 | 133 | 108 | 61.43% | 44.81% | 293 | 241 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000907' χ2 p-value for Mo17 x B73: '.1073124' Biased in favor of strain: '' |
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| AC208436.3_FG007 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.534224 x 10-1 | 48 | 19 | 19 | 43 | 71.64% | 69.35% | 67 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3876799' χ2 p-value for Mo17 x B73: '.6534224' Biased in favor of strain: '' |
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| AC208358.3_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 0 | 0 | 100.00% | 8 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC208358.3_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.95346 x 10-2 | 33 | 51 | 17 | 41 | 39.29% | 70.69% | 84 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0495346' χ2 p-value for Mo17 x B73: '.0016252' Biased in favor of strain: 'Mo17' |
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| AC208337.2_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 101 | 0 | 2 | 7 | 100.00% | 77.78% | 101 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.20e-24' χ2 p-value for Mo17 x B73: '.0955807' Biased in favor of strain: '' |
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| AC208337.2_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 4.13 x 10-5 | 752 | 0 | 4 | 51 | 100.00% | 92.73% | 752 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0000413' Biased in favor of strain: '' |
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| AC208327.4_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 4 | 4 | 4 | 69.23% | 50.00% | 13 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8445321' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: '' |
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| AC208327.4_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.151 x 10-3 | 21 | 7 | 24 | 5 | 75.00% | 17.24% | 28 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0004184' Biased in favor of strain: 'B73' |
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| AC208201.3_FG001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.54316 x 10-2 | 347 | 259 | 314 | 271 | 57.26% | 46.32% | 606 | 585 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003506' χ2 p-value for Mo17 x B73: '.0754316' Biased in favor of strain: '' |
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| AC208201.3_FG001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.7277 x 10-3 | 313 | 118 | 181 | 194 | 72.62% | 51.73% | 431 | 375 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0087277' χ2 p-value for Mo17 x B73: '8.54e-10' Biased in favor of strain: 'B73' |
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| AC208082.3_FG008 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC208082.3_FG008 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC208042.3_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC208042.3_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 4 | 0 | 0.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC208031.3_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 1 | 33.33% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC208031.3_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.962534 x 10-1 | 8 | 7 | 13 | 2 | 53.33% | 13.33% | 15 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7962534' χ2 p-value for Mo17 x B73: '.0045087' Biased in favor of strain: '' |
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| AC208031.3_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.047575 x 10-1 | 31 | 18 | 24 | 14 | 63.27% | 36.84% | 49 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0632908' χ2 p-value for Mo17 x B73: '.1047575' Biased in favor of strain: '' |
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| AC208031.3_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.985356 x 10-1 | 18 | 19 | 9 | 21 | 48.65% | 70.00% | 37 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0200725' χ2 p-value for Mo17 x B73: '.6985356' Biased in favor of strain: '' |
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| AC207888.3_FG009 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC207888.3_FG009 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.7 x 10-28 | 282 | 68 | 298 | 84 | 80.57% | 21.99% | 350 | 382 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.68e-30' χ2 p-value for Mo17 x B73: '6.70e-28' Biased in favor of strain: 'B73' |
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| AC207814.3_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 8 | 0 | 9 | 0.00% | 100.00% | 8 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| AC207814.3_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 15 | 0.00% | 100.00% | 4 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.0061699' Biased in favor of strain: '' |
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| AC207728.2_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 2 | 0 | 50.00% | 0.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| AC207728.2_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 4 | 2 | 1 | 42.86% | 33.33% | 7 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| AC207656.3_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.937686 x 10-1 | 34 | 7 | 13 | 9 | 82.93% | 40.91% | 41 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000248' χ2 p-value for Mo17 x B73: '.3937686' Biased in favor of strain: '' |
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| AC207656.3_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.916992 x 10-1 | 55 | 21 | 34 | 30 | 72.37% | 46.88% | 76 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2916992' χ2 p-value for Mo17 x B73: '.0007829' Biased in favor of strain: '' |
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| AC207655.2_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6999 x 10-3 | 18 | 0 | 18 | 0 | 100.00% | 0.00% | 18 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026999' χ2 p-value for Mo17 x B73: '1.97e-09' Biased in favor of strain: 'B73' |
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| AC207655.2_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 1 | 0 | 100.00% | 0.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| AC207652.3_FG001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.779317 x 10-1 | 10 | 17 | 12 | 6 | 37.04% | 33.33% | 27 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1779317' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| AC207652.3_FG001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.434433 x 10-1 | 15 | 6 | 13 | 8 | 71.43% | 38.10% | 21 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6434433' χ2 p-value for Mo17 x B73: '.0054785' Biased in favor of strain: '' |
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| AC207628.4_FG010 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.52 x 10-10 | 82 | 0 | 68 | 0 | 100.00% | 0.00% | 82 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.52e-10' χ2 p-value for Mo17 x B73: '2.00e-31' Biased in favor of strain: 'B73' |
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| AC207628.4_FG010 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.26 x 10-12 | 67 | 0 | 48 | 0 | 100.00% | 0.00% | 67 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.72e-16' χ2 p-value for Mo17 x B73: '4.26e-12' Biased in favor of strain: 'B73' |
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| AC207628.4_FG009 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.64 x 10-13 | 295 | 141 | 235 | 81 | 67.66% | 25.63% | 436 | 316 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.64e-13' χ2 p-value for Mo17 x B73: '4.59e-18' Biased in favor of strain: 'B73' |
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| AC207628.4_FG009 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.83885 x 10-2 | 279 | 113 | 249 | 283 | 71.17% | 53.20% | 392 | 532 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0583885' χ2 p-value for Mo17 x B73: '4.36e-11' Biased in favor of strain: '' |
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| AC207546.3_FG004 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 16 | 0.00% | 100.00% | 4 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| AC207546.3_FG004 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 11 | 0.00% | 100.00% | 4 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: '' |
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| AC207533.2_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.846357 x 10-1 | 94 | 96 | 108 | 123 | 49.47% | 53.25% | 190 | 231 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8846357' χ2 p-value for Mo17 x B73: '.3236782' Biased in favor of strain: '' |
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| AC207533.2_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.083075 x 10-1 | 35 | 21 | 35 | 49 | 62.50% | 58.33% | 56 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5083075' χ2 p-value for Mo17 x B73: '.1051924' Biased in favor of strain: '' |
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| AC207347.3_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.00558 x 10-2 | 43 | 12 | 42 | 44 | 78.18% | 51.16% | 55 | 86 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0700558' χ2 p-value for Mo17 x B73: '.0022886' Biased in favor of strain: '' |
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| AC207347.3_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.735682 x 10-1 | 32 | 22 | 35 | 18 | 59.26% | 33.96% | 54 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1735682' χ2 p-value for Mo17 x B73: '.0195367' Biased in favor of strain: '' |
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| AC207342.3_FG008 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.270892 x 10-1 | 11 | 5 | 4 | 6 | 68.75% | 60.00% | 16 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1336144' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: '' |
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| AC207342.3_FG008 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 3 | 2 | 100.00% | 40.00% | 9 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| AC207342.3_FG007 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.614716 x 10-1 | 42 | 17 | 39 | 47 | 71.19% | 54.65% | 59 | 86 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4614716' χ2 p-value for Mo17 x B73: '.0180921' Biased in favor of strain: '' |
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| AC207342.3_FG007 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.485063 x 10-1 | 47 | 53 | 42 | 34 | 47.00% | 44.74% | 100 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5485063' χ2 p-value for Mo17 x B73: '.3587953' Biased in favor of strain: '' |
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| AC207265.3_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.318624 x 10-1 | 89 | 70 | 88 | 52 | 55.97% | 37.14% | 159 | 140 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1318624' χ2 p-value for Mo17 x B73: '.0023458' Biased in favor of strain: '' |
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| AC207265.3_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 8 | 5 | 100.00% | 38.46% | 5 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.030984' Biased in favor of strain: '' |
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| AC207205.3_FG004 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 2 | 6 | 0.00% | 75.00% | 3 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: '' |
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| AC207205.3_FG004 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.657123 x 10-1 | 12 | 3 | 7 | 4 | 80.00% | 36.36% | 15 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0201368' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: '' |
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| AC207043.3_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 5 | 8 | 1 | 58.33% | 11.11% | 12 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.0196307' Biased in favor of strain: '' |
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| AC207043.3_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 1 | 33.33% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC206951.3_FG017 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 20 | 2 | 4 | 5 | 90.91% | 55.56% | 22 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.015862' χ2 p-value for Mo17 x B73: '.4795' Biased in favor of strain: '' |
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| AC206951.3_FG017 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.41 x 10-8 | 156 | 74 | 252 | 88 | 67.83% | 25.88% | 230 | 340 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.41e-08' χ2 p-value for Mo17 x B73: '5.89e-19' Biased in favor of strain: 'B73' |