| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AC211175.3_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.481775 x 10-1 | 313 | 132 | 184 | 322 | 70.34% | 63.64% | 445 | 506 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1005094' χ2 p-value for Mo17 x B73: '.1481775' Biased in favor of strain: '' |
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| AC211175.3_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.51 x 10-12 | 521 | 302 | 477 | 285 | 63.30% | 37.40% | 823 | 762 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.28e-14' χ2 p-value for Mo17 x B73: '3.51e-12' Biased in favor of strain: 'B73' |
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| AC211166.5_FG009 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC211166.5_FG009 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 3 | 0 | 100.00% | 0.00% | 5 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| AC211164.5_FG004 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 2 | 0 | 100.00% | 0.00% | 9 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| AC211164.5_FG004 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 3 | 0 | 80.00% | 0.00% | 5 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| AC211164.5_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.688114 x 10-1 | 20 | 26 | 36 | 41 | 43.48% | 53.25% | 46 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3763445' χ2 p-value for Mo17 x B73: '.5688114' Biased in favor of strain: '' |
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| AC211164.5_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.104666 x 10-1 | 56 | 39 | 23 | 76 | 58.95% | 76.77% | 95 | 99 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1104666' χ2 p-value for Mo17 x B73: '.0330063' Biased in favor of strain: '' |
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| AC210961.3_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC210961.3_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 3 | 0.00% | 100.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| AC210816.3_FG006 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 412 | 77 | 401 | 105 | 84.25% | 20.75% | 489 | 506 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| AC210816.3_FG006 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 2.04 x 10-6 | 34 | 62 | 132 | 151 | 35.42% | 53.36% | 96 | 283 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.29e-11' χ2 p-value for Mo17 x B73: '2.04e-06' Biased in favor of strain: '' |
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| AC210741.4_FG008 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC210741.4_FG008 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 0 | 2 | 0.00% | 100.00% | 6 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| AC210616.4_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.28 x 10-28 | 208 | 35 | 312 | 61 | 85.60% | 16.35% | 243 | 373 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.28e-28' χ2 p-value for Mo17 x B73: '1.28e-38' Biased in favor of strain: 'B73' |
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| AC210616.4_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC210595.3_FG004 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 1 | 4 | 100.00% | 80.00% | 8 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: '' |
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| AC210595.3_FG004 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.31668 x 10-1 | 40 | 19 | 27 | 17 | 67.80% | 38.64% | 59 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0062576' χ2 p-value for Mo17 x B73: '.131668' Biased in favor of strain: '' |
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| AC210314.3_FG006 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.161533 x 10-1 | 54 | 49 | 36 | 38 | 52.43% | 51.35% | 103 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6222495' χ2 p-value for Mo17 x B73: '.8161533' Biased in favor of strain: '' |
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| AC210314.3_FG006 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.15683 x 10-2 | 60 | 70 | 34 | 111 | 46.15% | 76.55% | 130 | 145 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.00e-07' χ2 p-value for Mo17 x B73: '.0115683' Biased in favor of strain: '' |
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| AC210303.3_FG001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 4 | 100.00% | 80.00% | 1 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: '' |
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| AC210303.3_FG001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 1 | 0.00% | 50.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| AC210193.4_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.948866 x 10-1 | 41 | 5 | 14 | 12 | 89.13% | 46.15% | 46 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.11e-07' χ2 p-value for Mo17 x B73: '.6948866' Biased in favor of strain: '' |
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| AC210193.4_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 6.61 x 10-5 | 61 | 0 | 2 | 41 | 100.00% | 95.35% | 61 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.34e-08' χ2 p-value for Mo17 x B73: '.0000661' Biased in favor of strain: '' |
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| AC210173.4_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.96 x 10-5 | 76 | 9 | 32 | 21 | 89.41% | 39.62% | 85 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.65e-06' χ2 p-value for Mo17 x B73: '.0000296' Biased in favor of strain: 'B73' |
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| AC210173.4_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1041 | 36 | 1391 | 42 | 96.66% | 2.93% | 1077 | 1433 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| AC210173.4_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.122405 x 10-1 | 63 | 29 | 40 | 27 | 68.48% | 40.30% | 92 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000393' χ2 p-value for Mo17 x B73: '.1122405' Biased in favor of strain: '' |
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| AC210173.4_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.296344 x 10-1 | 22 | 35 | 39 | 57 | 38.60% | 59.38% | 57 | 96 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.94e-06' χ2 p-value for Mo17 x B73: '.1296344' Biased in favor of strain: '' |
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| AC210158.3_FG004 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 2 | 2 | 100.00% | 50.00% | 10 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| AC210158.3_FG004 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.485063 x 10-1 | 11 | 14 | 11 | 19 | 44.00% | 63.33% | 25 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5485063' χ2 p-value for Mo17 x B73: '.144127' Biased in favor of strain: '' |
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| AC210023.3_FG014 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.990752 x 10-1 | 49 | 41 | 38 | 13 | 54.44% | 25.49% | 90 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3990752' χ2 p-value for Mo17 x B73: '.000464' Biased in favor of strain: '' |
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| AC210023.3_FG014 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.55002 x 10-2 | 36 | 34 | 42 | 56 | 51.43% | 57.14% | 70 | 98 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0068399' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| AC210013.4_FG019 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3413 | 1112 | 1726 | 1954 | 75.43% | 53.10% | 4525 | 3680 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.63e-36' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| AC210013.4_FG019 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3112 | 1215 | 3444 | 1538 | 71.92% | 30.87% | 4327 | 4982 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| AC210013.4_FG018 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1436 | 235 | 1120 | 139 | 85.94% | 11.04% | 1671 | 1259 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| AC210013.4_FG018 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3375 | 79 | 1805 | 211 | 97.71% | 10.47% | 3454 | 2016 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| AC210013.4_FG016 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.42 x 10-11 | 313 | 67 | 152 | 110 | 82.37% | 41.98% | 380 | 262 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.42e-11' χ2 p-value for Mo17 x B73: '2.35e-17' Biased in favor of strain: 'B73' |
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| AC210013.4_FG016 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.0 x 10-30 | 273 | 47 | 247 | 51 | 85.31% | 17.11% | 320 | 298 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.38e-36' χ2 p-value for Mo17 x B73: '7.09e-30' Biased in favor of strain: 'B73' |
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| AC210013.4_FG014 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 2 | 5 | 0.00% | 71.43% | 1 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: '' |
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| AC210013.4_FG014 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 0 | 0 | 75.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC210013.4_FG013 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.26777 x 10-1 | 54 | 19 | 34 | 80 | 73.97% | 70.18% | 73 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1854588' χ2 p-value for Mo17 x B73: '.426777' Biased in favor of strain: '' |
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| AC210013.4_FG013 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.13428 x 10-2 | 221 | 178 | 211 | 149 | 55.39% | 41.39% | 399 | 360 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0313428' χ2 p-value for Mo17 x B73: '.0010843' Biased in favor of strain: 'B73' |
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| AC210013.4_FG012 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.02 x 10-11 | 158 | 58 | 146 | 50 | 73.15% | 25.51% | 216 | 196 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.02e-11' χ2 p-value for Mo17 x B73: '7.03e-12' Biased in favor of strain: 'B73' |
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| AC210013.4_FG012 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.985536 x 10-1 | 21 | 9 | 8 | 25 | 70.00% | 75.76% | 30 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6985536' χ2 p-value for Mo17 x B73: '.2679382' Biased in favor of strain: '' |
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| AC210013.4_FG011 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.0 x 10-30 | 1434 | 376 | 981 | 844 | 79.23% | 46.25% | 1810 | 1825 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.80e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| AC210013.4_FG011 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1651 | 821 | 1636 | 879 | 66.79% | 34.95% | 2472 | 2515 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| AC210013.4_FG009 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.99 x 10-11 | 171 | 49 | 152 | 57 | 77.73% | 27.27% | 220 | 209 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.95e-16' χ2 p-value for Mo17 x B73: '4.99e-11' Biased in favor of strain: 'B73' |
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| AC210013.4_FG009 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.29 x 10-4 | 129 | 34 | 62 | 53 | 79.14% | 46.09% | 163 | 115 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000729' χ2 p-value for Mo17 x B73: '2.85e-06' Biased in favor of strain: 'B73' |
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| AC210013.4_FG008 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.09057 x 10-2 | 232 | 84 | 152 | 106 | 73.42% | 41.09% | 316 | 258 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0109057' χ2 p-value for Mo17 x B73: '2.87e-18' Biased in favor of strain: '' |
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| AC210013.4_FG008 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.05 x 10-17 | 537 | 269 | 520 | 281 | 66.63% | 35.08% | 806 | 801 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.73e-21' χ2 p-value for Mo17 x B73: '3.05e-17' Biased in favor of strain: 'B73' |
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| AC210013.4_FG007 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.56 x 10-12 | 0 | 49 | 1 | 52 | 0.00% | 98.11% | 49 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.56e-12' χ2 p-value for Mo17 x B73: '2.46e-12' Biased in favor of strain: 'Mo17' |
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| AC210013.4_FG007 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 0 | 41 | 0.00% | 100.00% | 5 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '5.96e-06' Biased in favor of strain: '' |
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| AC210013.4_FG006 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC210013.4_FG006 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC210013.4_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.929801 x 10-1 | 8 | 6 | 18 | 12 | 57.14% | 40.00% | 14 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '.2733217' Biased in favor of strain: '' |
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| AC210013.4_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 0 | 6 | 1 | 100.00% | 14.29% | 12 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '.0032835' Biased in favor of strain: '' |
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| AC210013.4_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.53 x 10-7 | 2 | 44 | 3 | 67 | 4.35% | 95.71% | 46 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.07e-19' χ2 p-value for Mo17 x B73: '2.53e-07' Biased in favor of strain: 'Mo17' |
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| AC210013.4_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC210003.2_FG004 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.17 x 10-9 | 3293 | 2367 | 3356 | 2888 | 58.18% | 46.25% | 5660 | 6244 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.16e-35' χ2 p-value for Mo17 x B73: '3.17e-09' Biased in favor of strain: 'B73' |
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| AC210003.2_FG004 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.403009 x 10-1 | 9 | 3 | 26 | 28 | 75.00% | 51.85% | 12 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5403009' χ2 p-value for Mo17 x B73: '.0209213' Biased in favor of strain: '' |
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| AC209987.4_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 30 | 1 | 1 | 1 | 96.77% | 50.00% | 31 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003766' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| AC209987.4_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.453439 x 10-1 | 121 | 116 | 96 | 65 | 51.05% | 40.37% | 237 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7453439' χ2 p-value for Mo17 x B73: '.01456' Biased in favor of strain: '' |
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| AC209898.2_FG004 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 403 | 92 | 453 | 122 | 81.41% | 21.22% | 495 | 575 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| AC209898.2_FG004 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.72442 x 10-2 | 31 | 1 | 19 | 22 | 96.88% | 53.66% | 32 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000289' χ2 p-value for Mo17 x B73: '.0772442' Biased in favor of strain: '' |
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| AC209858.4_FG004 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.58 x 10-7 | 215 | 32 | 125 | 135 | 87.04% | 51.92% | 247 | 260 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.09e-11' χ2 p-value for Mo17 x B73: '4.58e-07' Biased in favor of strain: 'B73' |
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| AC209858.4_FG004 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.39225 x 10-2 | 60 | 43 | 74 | 49 | 58.25% | 39.84% | 103 | 123 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0939225' χ2 p-value for Mo17 x B73: '.0241852' Biased in favor of strain: '' |
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| AC209858.4_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.28 x 10-9 | 1893 | 1329 | 1459 | 1149 | 58.75% | 44.06% | 3222 | 2608 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.90e-23' χ2 p-value for Mo17 x B73: '1.28e-09' Biased in favor of strain: 'B73' |
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| AC209858.4_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.490048 x 10-1 | 1316 | 598 | 725 | 1429 | 68.76% | 66.34% | 1914 | 2154 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0524619' χ2 p-value for Mo17 x B73: '.7490048' Biased in favor of strain: '' |
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| AC209845.4_FG010 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 1 | 100.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| AC209845.4_FG010 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 1 | 1 | 100.00% | 50.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| AC209819.3_FG012 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 7 | 2 | 4 | 61.11% | 66.67% | 18 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3457786' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| AC209819.3_FG012 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.35593 x 10-1 | 15 | 1 | 6 | 5 | 93.75% | 45.45% | 16 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0215569' χ2 p-value for Mo17 x B73: '.135593' Biased in favor of strain: '' |
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| AC209819.3_FG009 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 3 | 6 | 83.33% | 66.67% | 6 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| AC209819.3_FG009 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.015081 x 10-1 | 16 | 13 | 18 | 15 | 55.17% | 45.45% | 29 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5774686' χ2 p-value for Mo17 x B73: '.6015081' Biased in favor of strain: '' |
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| AC209819.3_FG008 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC209819.3_FG008 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC209819.3_FG006 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC209819.3_FG006 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.111 x 10-4 | 0 | 11 | 0 | 17 | 0.00% | 100.00% | 11 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.0000374' Biased in favor of strain: 'Mo17' |
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| AC209819.3_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.637029 x 10-1 | 10 | 3 | 15 | 12 | 76.92% | 44.44% | 13 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0522036' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| AC209819.3_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.38 x 10-6 | 0 | 16 | 3 | 55 | 0.00% | 94.83% | 16 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.54e-08' χ2 p-value for Mo17 x B73: '5.38e-06' Biased in favor of strain: 'Mo17' |
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| AC209810.3_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC209810.3_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.8431 x 10-3 | 73 | 42 | 86 | 33 | 63.48% | 27.73% | 115 | 119 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0038431' χ2 p-value for Mo17 x B73: '1.18e-06' Biased in favor of strain: 'B73' |
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| AC209784.3_FG011 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.6 x 10-11 | 55 | 147 | 50 | 144 | 27.23% | 74.23% | 202 | 194 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.60e-11' χ2 p-value for Mo17 x B73: '1.49e-11' Biased in favor of strain: 'Mo17' |
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| AC209784.3_FG011 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.2835 x 10-3 | 6 | 17 | 10 | 53 | 26.09% | 84.13% | 23 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000365' χ2 p-value for Mo17 x B73: '.0032835' Biased in favor of strain: 'Mo17' |
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| AC209784.3_FG007 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.33 x 10-5 | 64 | 8 | 73 | 32 | 88.89% | 30.48% | 72 | 105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '3.64e-15' Biased in favor of strain: 'B73' |
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| AC209784.3_FG007 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.962534 x 10-1 | 9 | 2 | 8 | 7 | 81.82% | 46.67% | 11 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0348085' χ2 p-value for Mo17 x B73: '.7962534' Biased in favor of strain: '' |
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| AC209768.3_FG005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 8 | 0.00% | 100.00% | 3 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| AC209768.3_FG005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC209739.3_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 0 | 0 | 50.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC209739.3_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.6556 x 10-3 | 22 | 2 | 10 | 1 | 91.67% | 9.09% | 24 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000446' χ2 p-value for Mo17 x B73: '.0066556' Biased in favor of strain: 'B73' |
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| AC209729.3_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 9 | 0 | 100.00% | 0.00% | 4 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| AC209729.3_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| AC209675.3_FG001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 3 | 0.00% | 100.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| AC209675.3_FG001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 7 | 0 | 3 | 0.00% | 100.00% | 7 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| AC209664.3_FG002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.577808 x 10-1 | 516 | 553 | 526 | 462 | 48.27% | 46.76% | 1069 | 988 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2577808' χ2 p-value for Mo17 x B73: '.0417392' Biased in favor of strain: '' |
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| AC209664.3_FG002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.642746 x 10-1 | 520 | 269 | 333 | 664 | 65.91% | 66.60% | 789 | 997 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6503611' χ2 p-value for Mo17 x B73: '.9642746' Biased in favor of strain: '' |
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| AC209626.2_FG013 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.315704 x 10-1 | 44 | 24 | 12 | 38 | 64.71% | 76.00% | 68 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7315704' χ2 p-value for Mo17 x B73: '.1615134' Biased in favor of strain: '' |
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| AC209626.2_FG013 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.151002 x 10-1 | 23 | 35 | 11 | 26 | 39.66% | 70.27% | 58 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1151002' χ2 p-value for Mo17 x B73: '.0136637' Biased in favor of strain: '' |
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| AC209624.2_FG003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 10 | 10 | 47 | 15 | 50.00% | 24.19% | 20 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0000482' Biased in favor of strain: '' |
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| AC209624.2_FG003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 6.91 x 10-15 | 0 | 40 | 49 | 12 | 0.00% | 19.67% | 40 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.74e-19' χ2 p-value for Mo17 x B73: '6.91e-15' Biased in favor of strain: '' |