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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G05350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.95379 x 10-1 19 30 12 70 38.78% 85.37% 49 82 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000541'
Avg. expression score for this sample: '71.6878'
Avg. expression score in LCM sample: '9.93579'
Tissue used: 'pure endosperm, no chalazal'
AT5G05350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.62 x 10-4 94 86 61 382 52.22% 86.23% 180 443 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000541'
Avg. expression score for this sample: '120.729'
Avg. expression score in LCM sample: '9.93579'
Tissue used: 'full endosperm'
AT5G05350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.30828 x 10-1 20 33 9 7 37.74% 43.75% 53 16 TAIR8 Avg. embryo expression (dissected): '63.2625'
Avg. embryo expression (LCM): '48.6519'
AT5G05350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.18 x 10-4 117 15 88.64% 132 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.3 x 10-11 219 16 93.19% 235 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.43664 x 10-1 66 16 80.49% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05340 PRX52 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.55983'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G05340 PRX52 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.09805'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G05340 PRX52 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G05340 PRX52 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05340 PRX52 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05340 PRX52 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '38.2147'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G05330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '72.8606'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G05330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '65.5199'
Avg. embryo expression (LCM): '85.7123'
AT5G05330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.24544 x 10-1 4 10 0 5 28.57% 100.00% 14 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.326508'
Avg. expression score for this sample: '5.70543'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G05320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.06485 x 10-1 12 13 1 10 48.00% 90.91% 25 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.326508'
Avg. expression score for this sample: '9.09895'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G05320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 4 0 0 42.86% 7 0 TAIR8 Avg. embryo expression (dissected): '3.55165'
Avg. embryo expression (LCM): '2.788'
AT5G05320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.03759 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.4795 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.46429 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.73279 x 10-1 19 8 19 21 70.37% 52.50% 27 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.49326'
Avg. expression score for this sample: '40.3989'
Avg. expression score in LCM sample: '25.9712'
Tissue used: 'pure endosperm, no chalazal'
AT5G05310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 9 7 21 52.63% 75.00% 19 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.49326'
Avg. expression score for this sample: '32.5268'
Avg. expression score in LCM sample: '25.9712'
Tissue used: 'full endosperm'
AT5G05310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 21 9 21 7 70.00% 25.00% 30 28 TAIR8 Avg. embryo expression (dissected): '74.5949'
Avg. embryo expression (LCM): '49.9329'
AT5G05310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.8738 x 10-1 35 14 71.43% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-5 55 5 91.67% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G05300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G05300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G05300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05290 EXPA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.262989'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G05290 EXPA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G05290 EXPA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G05290 EXPA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05290 EXPA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05290 EXPA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05282 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G05282 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.53329'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G05282 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.615086'
Avg. embryo expression (LCM): '1.33121'
AT5G05282 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05282 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05282 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G05280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.958303'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G05280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.788596'
Avg. embryo expression (LCM): '2.66242'
AT5G05280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05270 CHIL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.9 x 10-14 166 3 8 31 98.22% 79.49% 169 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '862.247'
Avg. expression score in LCM sample: '177.521'
Tissue used: 'pure endosperm, no chalazal'
AT5G05270 CHIL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 610 31 151 1163 95.16% 88.51% 641 1314 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1812.96'
Avg. expression score in LCM sample: '177.521'
Tissue used: 'full endosperm'
AT5G05270 CHIL embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.212 x 10-2 45 25 4 8 64.29% 66.67% 70 12 TAIR8 Avg. embryo expression (dissected): '670.985'
Avg. embryo expression (LCM): '254.512'
AT5G05270 CHIL endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.087 x 10-3 248 10 96.12% 258 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05270 CHIL endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.4 x 10-29 847 0 100.00% 847 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05270 CHIL endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 4215 3 99.93% 4218 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05260 CYP79A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.378'
Avg. expression score in LCM sample: '7.49594'
Tissue used: 'pure endosperm, no chalazal'
AT5G05260 CYP79A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '61.6089'
Avg. expression score in LCM sample: '7.49594'
Tissue used: 'full endosperm'
AT5G05260 CYP79A2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.74065'
Avg. embryo expression (LCM): '0'
AT5G05260 CYP79A2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05260 CYP79A2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05260 CYP79A2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0984 x 10-2 1118 565 454 1213 66.43% 72.77% 1683 1667 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.017632'
Avg. expression score for this sample: '1494.17'
Avg. expression score in LCM sample: '214.119'
Tissue used: 'pure endosperm, no chalazal'
AT5G05250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.51152 x 10-1 922 363 384 633 71.75% 62.24% 1285 1017 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.017632'
Avg. expression score for this sample: '1136.9'
Avg. expression score in LCM sample: '214.119'
Tissue used: 'full endosperm'
AT5G05250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.4848 x 10-1 33 15 25 16 68.75% 39.02% 48 41 TAIR8 Avg. embryo expression (dissected): '61.7851'
Avg. embryo expression (LCM): '0'
AT5G05250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.288 x 10-2 220 127 63.40% 347 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.9 x 10-8 339 80 80.91% 419 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.26044 x 10-1 409 188 68.51% 597 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.1674'
Avg. expression score in LCM sample: '33.2614'
Tissue used: 'pure endosperm, no chalazal'
AT5G05240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '24.5868'
Avg. expression score in LCM sample: '33.2614'
Tissue used: 'full endosperm'
AT5G05240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '56.5566'
Avg. embryo expression (LCM): '66.3218'
AT5G05240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 1 1 1 85.71% 50.00% 7 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009935'
Avg. expression score for this sample: '40.8257'
Avg. expression score in LCM sample: '3.79206'
Tissue used: 'pure endosperm, no chalazal'
AT5G05230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.597 x 10-3 23 2 2 18 92.00% 90.00% 25 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009935'
Avg. expression score for this sample: '87.7544'
Avg. expression score in LCM sample: '3.79206'
Tissue used: 'full endosperm'
AT5G05230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.40867 x 10-1 9 1 0 0 90.00% 10 0 TAIR8 Avg. embryo expression (dissected): '44.0607'
Avg. embryo expression (LCM): '30.7685'
AT5G05230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.8717 x 10-2 33 0 100.00% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.79065 x 10-1 28 17 8 10 62.22% 55.56% 45 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.677319'
Avg. expression score for this sample: '38.6391'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G05220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 16 14 3 18 53.33% 85.71% 30 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.677319'
Avg. expression score for this sample: '41.705'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G05220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 4 3 11 6 57.14% 35.29% 7 17 TAIR8 Avg. embryo expression (dissected): '32.4915'
Avg. embryo expression (LCM): '9.49428'
AT5G05220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.90888 x 10-1 10 7 58.82% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.1668 x 10-2 8 12 40.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.734 x 10-3 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1114.87'
Avg. expression score in LCM sample: '158.796'
Tissue used: 'pure endosperm, no chalazal'
AT5G05210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1604.17'
Avg. expression score in LCM sample: '158.796'
Tissue used: 'full endosperm'
AT5G05210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1814.36'
Avg. embryo expression (LCM): '1915.69'
AT5G05210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 3 1 75.00% 25.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '104.405'
Avg. expression score in LCM sample: '68.3306'
Tissue used: 'pure endosperm, no chalazal'
AT5G05200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 0 3 3 100.00% 50.00% 7 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '116.628'
Avg. expression score in LCM sample: '68.3306'
Tissue used: 'full endosperm'
AT5G05200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '130.355'
Avg. embryo expression (LCM): '51.0883'
AT5G05200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.54849 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'