Displaying data sets 36001 - 36100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G05800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '222.732'
Avg. expression score in LCM sample: '136.808'
Tissue used: 'pure endosperm, no chalazal'
AT5G05800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '123.081'
Avg. expression score in LCM sample: '136.808'
Tissue used: 'full endosperm'
AT5G05800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '98.8995'
Avg. embryo expression (LCM): '88.4375'
AT5G05800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05795 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G05795 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G05795 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G05795 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05795 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05795 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 3 3 75.00% 50.00% 4 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.354849'
Avg. expression score for this sample: '66.7021'
Avg. expression score in LCM sample: '1.10234'
Tissue used: 'pure endosperm, no chalazal'
AT5G05790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.24183 x 10-1 4 7 7 11 36.36% 61.11% 11 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.354849'
Avg. expression score for this sample: '42.3169'
Avg. expression score in LCM sample: '1.10234'
Tissue used: 'full endosperm'
AT5G05790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.08653'
Avg. embryo expression (LCM): '0'
AT5G05790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.78087 x 10-1 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.47387 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05780 RPN8A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.79627 x 10-1 34 17 17 29 66.67% 63.04% 51 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '68.8956'
Avg. expression score in LCM sample: '53.8385'
Tissue used: 'pure endosperm, no chalazal'
AT5G05780 RPN8A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.03188 x 10-1 28 21 28 77 57.14% 73.33% 49 105 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '92.0985'
Avg. expression score in LCM sample: '53.8385'
Tissue used: 'full endosperm'
AT5G05780 RPN8A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.26846 x 10-1 41 52 16 16 44.09% 50.00% 93 32 TAIR8 Avg. embryo expression (dissected): '108.102'
Avg. embryo expression (LCM): '135.243'
AT5G05780 RPN8A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.8296 x 10-1 14 3 82.35% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05780 RPN8A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.36495 x 10-1 126 59 68.11% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05780 RPN8A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.002 x 10-3 179 48 78.85% 227 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05770 WOX7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.696778'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G05770 WOX7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 4 100.00% 0 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.908307'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G05770 WOX7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '3.41593'
AT5G05770 WOX7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05770 WOX7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.54545 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05770 WOX7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05760 SYP31 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23444 x 10-1 86 22 33 54 79.63% 62.07% 108 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000237'
Avg. expression score for this sample: '40.4228'
Avg. expression score in LCM sample: '43.8439'
Tissue used: 'pure endosperm, no chalazal'
AT5G05760 SYP31 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.66 x 10-4 165 24 72 173 87.30% 70.61% 189 245 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000237'
Avg. expression score for this sample: '62.252'
Avg. expression score in LCM sample: '43.8439'
Tissue used: 'full endosperm'
AT5G05760 SYP31 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 19 17 7 6 52.78% 46.15% 36 13 TAIR8 Avg. embryo expression (dissected): '13.5895'
Avg. embryo expression (LCM): '6.55558'
AT5G05760 SYP31 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.75301 x 10-1 34 8 80.95% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05760 SYP31 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6987 x 10-2 308 65 82.57% 373 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05760 SYP31 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-13 667 68 90.75% 735 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.46338 x 10-1 83 10 32 39 89.25% 54.93% 93 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-06'
Avg. expression score for this sample: '30.8619'
Avg. expression score in LCM sample: '15.6386'
Tissue used: 'pure endosperm, no chalazal'
AT5G05750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.2 x 10-6 153 28 42 157 84.53% 78.89% 181 199 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-06'
Avg. expression score for this sample: '39.4771'
Avg. expression score in LCM sample: '15.6386'
Tissue used: 'full endosperm'
AT5G05750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.5324 x 10-2 28 5 8 6 84.85% 42.86% 33 14 TAIR8 Avg. embryo expression (dissected): '12.0078'
Avg. embryo expression (LCM): '12.5209'
AT5G05750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.5702 x 10-2 40 4 90.91% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3016 x 10-2 153 63 70.83% 216 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6 x 10-29 445 2 99.55% 447 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05740 EGY2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.26737 x 10-1 103 58 32 72 63.98% 69.23% 161 104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.863398'
Avg. expression score for this sample: '69.3125'
Avg. expression score in LCM sample: '25.4715'
Tissue used: 'pure endosperm, no chalazal'
AT5G05740 EGY2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.41521 x 10-1 134 64 77 141 67.68% 64.68% 198 218 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.863398'
Avg. expression score for this sample: '61.8877'
Avg. expression score in LCM sample: '25.4715'
Tissue used: 'full endosperm'
AT5G05740 EGY2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.04183 x 10-1 220 245 33 53 47.31% 61.63% 465 86 TAIR8 Avg. embryo expression (dissected): '219.695'
Avg. embryo expression (LCM): '146.873'
AT5G05740 EGY2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.51461 x 10-1 29 20 59.18% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05740 EGY2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.32909 x 10-1 72 25 74.23% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05740 EGY2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.48106 x 10-1 55 35 61.11% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05730 ASA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.26228 x 10-1 40 27 20 20 59.70% 50.00% 67 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.361172'
Avg. expression score for this sample: '36.17'
Avg. expression score in LCM sample: '12.8754'
Tissue used: 'pure endosperm, no chalazal'
AT5G05730 ASA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 40 36 35 100 52.63% 74.07% 76 135 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.361172'
Avg. expression score for this sample: '50.5956'
Avg. expression score in LCM sample: '12.8754'
Tissue used: 'full endosperm'
AT5G05730 ASA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.64651 x 10-1 146 139 44 28 51.23% 38.89% 285 72 TAIR8 Avg. embryo expression (dissected): '194.974'
Avg. embryo expression (LCM): '133.284'
AT5G05730 ASA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.45787 x 10-1 24 8 75.00% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05730 ASA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.961 x 10-3 158 54 74.53% 212 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05730 ASA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0 x 10-10 338 68 83.25% 406 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 4.54545 x 10-1 0 0 0 6 100.00% 0 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '1.1621'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G05720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '.134519'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G05720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.553484'
Avg. embryo expression (LCM): '0'
AT5G05720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.42857 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.53614 x 10-1 4 2 4 15 66.67% 78.95% 6 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.115765'
Avg. expression score for this sample: '29.0266'
Avg. expression score in LCM sample: '11.773'
Tissue used: 'pure endosperm, no chalazal'
AT5G05710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.94157 x 10-1 9 6 1 23 60.00% 95.83% 15 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.115765'
Avg. expression score for this sample: '34.1845'
Avg. expression score in LCM sample: '11.773'
Tissue used: 'full endosperm'
AT5G05710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 1 10 3 9 9.09% 75.00% 11 12 TAIR8 Avg. embryo expression (dissected): '36.6249'
Avg. embryo expression (LCM): '6.04068'
AT5G05710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.35596 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.28043 x 10-1 46 14 76.67% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.08985 x 10-1 37 8 82.22% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05700 ATE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.70411 x 10-1 95 58 44 62 62.09% 58.49% 153 106 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.314403'
Avg. expression score for this sample: '100.077'
Avg. expression score in LCM sample: '30.4982'
Tissue used: 'pure endosperm, no chalazal'
AT5G05700 ATE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2318 x 10-2 162 25 74 136 86.63% 64.76% 187 210 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.314403'
Avg. expression score for this sample: '121.172'
Avg. expression score in LCM sample: '30.4982'
Tissue used: 'full endosperm'
AT5G05700 ATE1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.0668 x 10-2 87 47 13 10 64.93% 43.48% 134 23 TAIR8 Avg. embryo expression (dissected): '98.6811'
Avg. embryo expression (LCM): '46.0146'
AT5G05700 ATE1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.78866 x 10-1 15 11 57.69% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05700 ATE1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7123 x 10-2 110 28 79.71% 138 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05700 ATE1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-10 263 36 87.96% 299 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05690 CPD endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.7256'
Avg. expression score in LCM sample: '12.9342'
Tissue used: 'pure endosperm, no chalazal'
AT5G05690 CPD endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.2682'
Avg. expression score in LCM sample: '12.9342'
Tissue used: 'full endosperm'
AT5G05690 CPD embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '86.0171'
Avg. embryo expression (LCM): '43.4527'
AT5G05690 CPD endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05690 CPD endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05690 CPD endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05680 MOS7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.0174'
Avg. expression score in LCM sample: '12.5667'
Tissue used: 'pure endosperm, no chalazal'
AT5G05680 MOS7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.374'
Avg. expression score in LCM sample: '12.5667'
Tissue used: 'full endosperm'
AT5G05680 MOS7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '39.9259'
Avg. embryo expression (LCM): '41.1042'
AT5G05680 MOS7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05680 MOS7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05680 MOS7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '50.2382'
Avg. expression score in LCM sample: '18.8574'
Tissue used: 'pure endosperm, no chalazal'
AT5G05670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '48.5705'
Avg. expression score in LCM sample: '18.8574'
Tissue used: 'full endosperm'
AT5G05670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '131.267'
Avg. embryo expression (LCM): '130.069'
AT5G05670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05660 NFXL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.86131 x 10-1 1 2 3 1 33.33% 25.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.176476'
Avg. expression score for this sample: '70.0782'
Avg. expression score in LCM sample: '60.4231'
Tissue used: 'pure endosperm, no chalazal'
AT5G05660 NFXL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.30265 x 10-1 2 1 9 9 66.67% 50.00% 3 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.176476'
Avg. expression score for this sample: '56.2847'
Avg. expression score in LCM sample: '60.4231'
Tissue used: 'full endosperm'
AT5G05660 NFXL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 1 5 1 1 16.67% 50.00% 6 2 TAIR8 Avg. embryo expression (dissected): '132.518'
Avg. embryo expression (LCM): '51.1888'
AT5G05660 NFXL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05660 NFXL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.25646 x 10-1 22 15 59.46% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05660 NFXL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.13982 x 10-1 6 4 60.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G05657 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.448373'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G05657 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.311408'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G05657 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G05657 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'