Displaying data sets 3501 - 3600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G62530 ALDH12A1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.5091 x 10-2 74 33 15 8 69.16% 34.78% 107 23 TAIR8 Avg. embryo expression (dissected): '136.482'
Avg. embryo expression (LCM): '97.0652'
AT5G62530 ALDH12A1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.38977 x 10-1 23 9 71.88% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62530 ALDH12A1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.082 x 10-3 46 4 92.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62530 ALDH12A1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2 x 10-14 145 3 97.97% 148 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62520 SRO5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.49952 x 10-1 223 87 105 154 71.94% 59.46% 310 259 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000031'
Avg. expression score for this sample: '453.731'
Avg. expression score in LCM sample: '92.1118'
Tissue used: 'pure endosperm, no chalazal'
AT5G62520 SRO5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1 x 10-6 421 209 299 1014 66.83% 77.23% 630 1313 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000031'
Avg. expression score for this sample: '1188.2'
Avg. expression score in LCM sample: '92.1118'
Tissue used: 'full endosperm'
AT5G62520 SRO5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.37524 x 10-1 11 5 2 6 68.75% 75.00% 16 8 TAIR8 Avg. embryo expression (dissected): '260.19'
Avg. embryo expression (LCM): '194.244'
AT5G62520 SRO5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.32461 x 10-1 133 52 71.89% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62520 SRO5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.4 x 10-7 93 7 93.00% 100 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62520 SRO5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-20 204 6 97.14% 210 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.822448'
Avg. expression score in LCM sample: '2.32227'
Tissue used: 'pure endosperm, no chalazal'
AT5G62510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.20638'
Avg. expression score in LCM sample: '2.32227'
Tissue used: 'full endosperm'
AT5G62510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G62510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62500 EB1B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.17601 x 10-1 103 14 56 15 88.03% 21.13% 117 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.21825'
Avg. expression score for this sample: '398.114'
Avg. expression score in LCM sample: '216.265'
Tissue used: 'pure endosperm, no chalazal'
AT5G62500 EB1B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.28169 x 10-1 179 45 120 107 79.91% 47.14% 224 227 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.21825'
Avg. expression score for this sample: '491.553'
Avg. expression score in LCM sample: '216.265'
Tissue used: 'full endosperm'
AT5G62500 EB1B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.4117 x 10-2 47 10 17 6 82.46% 26.09% 57 23 TAIR8 Avg. embryo expression (dissected): '254.264'
Avg. embryo expression (LCM): '228.742'
AT5G62500 EB1B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.041 x 10-3 11 19 36.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62500 EB1B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.7994 x 10-2 117 48 70.91% 165 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62500 EB1B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-28 320 22 93.57% 342 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62490 HVA22B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.53084'
Avg. expression score in LCM sample: '1.86664'
Tissue used: 'pure endosperm, no chalazal'
AT5G62490 HVA22B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '74.1323'
Avg. expression score in LCM sample: '1.86664'
Tissue used: 'full endosperm'
AT5G62490 HVA22B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.10388'
Avg. embryo expression (LCM): '0'
AT5G62490 HVA22B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62490 HVA22B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62490 HVA22B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62480 GSTU9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.903424'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G62480 GSTU9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 1 1 100.00% 50.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.44811'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G62480 GSTU9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.339159'
Avg. embryo expression (LCM): '0'
AT5G62480 GSTU9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62480 GSTU9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.27322 x 10-1 5 10 33.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62480 GSTU9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.30688 x 10-1 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62470 MYB96 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 17 3 6 1 85.00% 14.29% 20 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.779898'
Avg. expression score for this sample: '9.64489'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G62470 MYB96 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.49407 x 10-1 36 5 22 28 87.80% 56.00% 41 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.779898'
Avg. expression score for this sample: '54.0095'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G62470 MYB96 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.15057 x 10-1 82 38 33 8 68.33% 19.51% 120 41 TAIR8 Avg. embryo expression (dissected): '101.418'
Avg. embryo expression (LCM): '13.4377'
AT5G62470 MYB96 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62470 MYB96 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.515 x 10-3 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62470 MYB96 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4 x 10-8 86 2 97.73% 88 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.14782 x 10-1 69 42 39 129 62.16% 76.79% 111 168 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019697'
Avg. expression score for this sample: '197.183'
Avg. expression score in LCM sample: '91.2447'
Tissue used: 'pure endosperm, no chalazal'
AT5G62460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.2752 x 10-2 108 53 47 175 67.08% 78.83% 161 222 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019697'
Avg. expression score for this sample: '183.877'
Avg. expression score in LCM sample: '91.2447'
Tissue used: 'full endosperm'
AT5G62460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.39155 x 10-1 23 34 11 14 40.35% 56.00% 57 25 TAIR8 Avg. embryo expression (dissected): '85.6117'
Avg. embryo expression (LCM): '35.6915'
AT5G62460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.02682 x 10-1 35 10 77.78% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.62 x 10-4 179 33 84.43% 212 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5 x 10-8 185 20 90.24% 205 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '211.345'
Avg. expression score in LCM sample: '91.7591'
Tissue used: 'pure endosperm, no chalazal'
AT5G62440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 0 5 5 100.00% 50.00% 8 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '211.104'
Avg. expression score in LCM sample: '91.7591'
Tissue used: 'full endosperm'
AT5G62440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '404.016'
Avg. embryo expression (LCM): '978.451'
AT5G62440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.2105 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 23 11 67.65% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.77419 x 10-1 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62430 CDF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.41453'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G62430 CDF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 3 0.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.03707'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G62430 CDF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G62430 CDF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62430 CDF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62430 CDF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.17705'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G62420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.06171'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G62420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.20215'
Avg. embryo expression (LCM): '2.64986'
AT5G62420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62410 SMC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 55 42 17 60 56.70% 77.92% 97 77 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '252.973'
Avg. expression score in LCM sample: '115.452'
Tissue used: 'pure endosperm, no chalazal'
AT5G62410 SMC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.35176 x 10-1 53 32 80 176 62.35% 68.75% 85 256 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '327.92'
Avg. expression score in LCM sample: '115.452'
Tissue used: 'full endosperm'
AT5G62410 SMC2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.21401 x 10-1 71 100 12 20 41.52% 62.50% 171 32 TAIR8 Avg. embryo expression (dissected): '455.091'
Avg. embryo expression (LCM): '358.334'
AT5G62410 SMC2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.95136 x 10-1 21 6 77.78% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62410 SMC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9723 x 10-2 173 56 75.55% 229 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62410 SMC2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 114 56 67.06% 170 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 2 0.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.44432'
Avg. expression score in LCM sample: '2.29287'
Tissue used: 'pure endosperm, no chalazal'
AT5G62400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 2 0 0 66.67% 6 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.00658'
Avg. expression score in LCM sample: '2.29287'
Tissue used: 'full endosperm'
AT5G62400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 1 4 1 1 20.00% 50.00% 5 2 TAIR8 Avg. embryo expression (dissected): '32.6018'
Avg. embryo expression (LCM): '7.81143'
AT5G62400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.4 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62390 BAG7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.62568 x 10-1 3787 1799 2086 3741 67.79% 64.20% 5586 5827 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-08'
Avg. expression score for this sample: '7663.26'
Avg. expression score in LCM sample: '860.019'
Tissue used: 'pure endosperm, no chalazal'
AT5G62390 BAG7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.4 x 10-16 6599 2654 3059 7046 71.32% 69.73% 9253 10105 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-08'
Avg. expression score for this sample: '7752.08'
Avg. expression score in LCM sample: '860.019'
Tissue used: 'full endosperm'
AT5G62390 BAG7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.709 x 10-3 3228 2576 1250 979 55.62% 43.92% 5804 2229 TAIR8 Avg. embryo expression (dissected): '8302.81'
Avg. embryo expression (LCM): '3422.49'
AT5G62390 BAG7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.46389 x 10-1 606 251 70.71% 857 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62390 BAG7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 3474 872 79.94% 4346 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62390 BAG7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 5449 643 89.45% 6092 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62380 NAC101 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G62380 NAC101 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.173137'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G62380 NAC101 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G62380 NAC101 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62380 NAC101 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62380 NAC101 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 13 4 6 10 76.47% 62.50% 17 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.371547'
Avg. expression score for this sample: '17.9556'
Avg. expression score in LCM sample: '21.4443'
Tissue used: 'pure endosperm, no chalazal'
AT5G62370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.61231 x 10-1 25 18 12 54 58.14% 81.82% 43 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.371547'
Avg. expression score for this sample: '31.4584'
Avg. expression score in LCM sample: '21.4443'
Tissue used: 'full endosperm'
AT5G62370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 18 21 3 6 46.15% 66.67% 39 9 TAIR8 Avg. embryo expression (dissected): '38.7312'
Avg. embryo expression (LCM): '68.5824'
AT5G62370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.00533 x 10-1 130 49 72.63% 179 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.89358 x 10-1 99 36 73.33% 135 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.85082 x 10-1 10 3 0 3 76.92% 100.00% 13 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.273343'
Avg. expression score for this sample: '35.1948'
Avg. expression score in LCM sample: '14.4627'
Tissue used: 'pure endosperm, no chalazal'
AT5G62360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.273343'
Avg. expression score for this sample: '7.02145'
Avg. expression score in LCM sample: '14.4627'
Tissue used: 'full endosperm'
AT5G62360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '4.53249'
Avg. embryo expression (LCM): '0'
AT5G62360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9848 x 10-2 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'