GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G000566	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.28 x 10^-11	88	0	43	2	100.00%	4.44%	88	45	RefGen V2	χ2 p-value for B73 x Mo17: '3.28e-11' χ2 p-value for Mo17 x B73: '8.42e-19' Biased in favor of strain: 'B73'
GRMZM2G000566	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.74 x 10^-4	113	192	174	247	37.05%	58.67%	305	421	RefGen V2	χ2 p-value for B73 x Mo17: '6.08e-06' χ2 p-value for Mo17 x B73: '.000374' Biased in favor of strain: 'Mo17'
GRMZM2G000540	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.691 x 10^-4	679	407	661	535	62.52%	44.73%	1086	1196	RefGen V2	χ2 p-value for B73 x Mo17: '1.53e-16' χ2 p-value for Mo17 x B73: '.0002691' Biased in favor of strain: 'B73'
GRMZM2G000540	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.104029 x 10^-1	734	338	447	620	68.47%	58.11%	1072	1067	RefGen V2	χ2 p-value for B73 x Mo17: '.2104029' χ2 p-value for Mo17 x B73: '3.00e-09' Biased in favor of strain: ''
GRMZM2G000531	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.95 x 10^-7	1846	736	857	1170	71.49%	57.72%	2582	2027	RefGen V2	χ2 p-value for B73 x Mo17: '1.95e-07' χ2 p-value for Mo17 x B73: '1.30e-17' Biased in favor of strain: 'B73'
GRMZM2G000531	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.61 x 10^-8	1525	1020	1169	922	59.92%	44.09%	2545	2091	RefGen V2	χ2 p-value for B73 x Mo17: '1.37e-23' χ2 p-value for Mo17 x B73: '6.61e-08' Biased in favor of strain: 'B73'
GRMZM2G000510	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.23 x 10^-19	1056	472	874	536	69.11%	38.01%	1528	1410	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.23e-19' Biased in favor of strain: 'B73'
GRMZM2G000510	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.89543 x 10^-1	1869	934	1159	1590	66.68%	57.84%	2803	2749	RefGen V2	χ2 p-value for B73 x Mo17: '.989543' χ2 p-value for Mo17 x B73: '9.41e-23' Biased in favor of strain: ''
GRMZM2G000489	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.93 x 10^-8	80	5	36	14	94.12%	28.00%	85	50	RefGen V2	χ2 p-value for B73 x Mo17: '7.93e-08' χ2 p-value for Mo17 x B73: '6.63e-09' Biased in favor of strain: 'B73'
GRMZM2G000489	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.23546 x 10^-2	25	10	20	7	71.43%	25.93%	35	27	RefGen V2	χ2 p-value for B73 x Mo17: '.0112299' χ2 p-value for Mo17 x B73: '.0123546' Biased in favor of strain: 'B73'
GRMZM2G000483	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	7		100.00%	0	7	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: ''
GRMZM2G000483	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.57 x 10^-7	2	24	0	55	7.69%	100.00%	26	55	RefGen V2	χ2 p-value for B73 x Mo17: '1.78e-10' χ2 p-value for Mo17 x B73: '1.57e-07' Biased in favor of strain: 'Mo17'
GRMZM2G000481	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.17861 x 10^-2	248	94	104	126	72.51%	54.78%	342	230	RefGen V2	χ2 p-value for B73 x Mo17: '.0217861' χ2 p-value for Mo17 x B73: '.0001317' Biased in favor of strain: ''
GRMZM2G000481	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.613348 x 10^-1	208	153	138	133	57.62%	49.08%	361	271	RefGen V2	χ2 p-value for B73 x Mo17: '.0037948' χ2 p-value for Mo17 x B73: '.7613348' Biased in favor of strain: ''
GRMZM2G000453	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0657 x 10^-3	216	109	124	80	66.46%	39.22%	325	204	RefGen V2	χ2 p-value for B73 x Mo17: '2.93e-09' χ2 p-value for Mo17 x B73: '.0020657' Biased in favor of strain: 'B73'
GRMZM2G000453	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.04 x 10^-13	118	3	78	11	97.52%	12.36%	121	89	RefGen V2	χ2 p-value for B73 x Mo17: '6.04e-13' χ2 p-value for Mo17 x B73: '1.63e-27' Biased in favor of strain: 'B73'
GRMZM2G000451	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.450521 x 10^-1	28	9	35	39	75.68%	52.70%	37	74	RefGen V2	χ2 p-value for B73 x Mo17: '.2450521' χ2 p-value for Mo17 x B73: '.0108285' Biased in favor of strain: ''
GRMZM2G000451	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	28	21	24	16	57.14%	40.00%	49	40	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: ''
GRMZM2G000423	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	836	38	1288	97	95.65%	7.00%	874	1385	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G000423	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	10	0	100.00%	0.00%	4	10	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '7.74e-06' Biased in favor of strain: ''
GRMZM2G000404	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	PEG	4.0 x 10^-30	0	95	65	0	0.00%	0.00%	95	65	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '4.10e-30' Biased in favor of strain: ''
GRMZM2G000404	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5688 x 10^-3	12	32	67	29	27.27%	30.21%	44	96	RefGen V2	χ2 p-value for B73 x Mo17: '.0025688' χ2 p-value for Mo17 x B73: '.0001052' Biased in favor of strain: ''
GRMZM2G000397	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.975234 x 10^-1	206	233	131	242	46.92%	64.88%	439	373	RefGen V2	χ2 p-value for B73 x Mo17: '.1975234' χ2 p-value for Mo17 x B73: '9.06e-09' Biased in favor of strain: ''
GRMZM2G000397	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	646	864	216	1094	42.78%	83.51%	1510	1310	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.92e-38' Biased in favor of strain: 'Mo17'
GRMZM2G000380	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.496797 x 10^-1	8	6	0	25	57.14%	100.00%	14	25	RefGen V2	χ2 p-value for B73 x Mo17: '.4496797' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: ''
GRMZM2G000380	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.80815 x 10^-2	15	6	15	7	71.43%	31.82%	21	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0495346' χ2 p-value for Mo17 x B73: '.0880815' Biased in favor of strain: ''
GRMZM2G000376	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	1	0.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G000376	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	1	0.00%	100.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G000361	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.18 x 10^-19	1132	326	1080	430	77.64%	28.48%	1458	1510	RefGen V2	χ2 p-value for B73 x Mo17: '6.18e-19' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G000361	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	397	46	363	57	89.62%	13.57%	443	420	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G000339	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.842992 x 10^-1	264	276	211	214	48.89%	50.35%	540	425	RefGen V2	χ2 p-value for B73 x Mo17: '.6055766' χ2 p-value for Mo17 x B73: '.8842992' Biased in favor of strain: ''
GRMZM2G000339	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.487867 x 10^-1	81	40	50	90	66.94%	64.29%	121	140	RefGen V2	χ2 p-value for B73 x Mo17: '.9487867' χ2 p-value for Mo17 x B73: '.5500969' Biased in favor of strain: ''
GRMZM2G000326	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G000326	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.075 x 10^-4	15	0	23	2	100.00%	8.00%	15	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '.0000267' Biased in favor of strain: 'B73'
GRMZM2G000292	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.429111 x 10^-1	98	97	51	68	50.26%	57.14%	195	119	RefGen V2	χ2 p-value for B73 x Mo17: '.9429111' χ2 p-value for Mo17 x B73: '.1191414' Biased in favor of strain: ''
GRMZM2G000292	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.986326 x 10^-1	41	15	8	62	73.21%	88.57%	56	70	RefGen V2	χ2 p-value for B73 x Mo17: '.2986326' χ2 p-value for Mo17 x B73: '.0001012' Biased in favor of strain: ''
GRMZM2G000288	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.49 x 10^-15	120	0	49	0	100.00%	0.00%	120	49	RefGen V2	χ2 p-value for B73 x Mo17: '9.49e-15' χ2 p-value for Mo17 x B73: '4.18e-23' Biased in favor of strain: 'B73'
GRMZM2G000288	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	229	0	168	0	100.00%	0.00%	229	168	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.02e-38' Biased in favor of strain: 'B73'
GRMZM2G000280	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.097124 x 10^-1	412	339	422	393	54.86%	48.22%	751	815	RefGen V2	χ2 p-value for B73 x Mo17: '.0077262' χ2 p-value for Mo17 x B73: '.3097124' Biased in favor of strain: ''
GRMZM2G000280	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.42 x 10^-15	69	131	84	416	34.50%	83.20%	200	500	RefGen V2	χ2 p-value for B73 x Mo17: '4.91e-22' χ2 p-value for Mo17 x B73: '4.42e-15' Biased in favor of strain: 'Mo17'
GRMZM2G000278	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.566 x 10^-4	4789	2084	2417	4447	69.68%	64.79%	6873	6864	RefGen V2	χ2 p-value for B73 x Mo17: '1.18e-07' χ2 p-value for Mo17 x B73: '.0009566' Biased in favor of strain: 'B73'
GRMZM2G000278	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.31 x 10^-5	659	510	410	601	56.37%	59.45%	1169	1011	RefGen V2	χ2 p-value for B73 x Mo17: '.0000131' χ2 p-value for Mo17 x B73: '1.89e-09' Biased in favor of strain: ''
GRMZM2G000271	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.398929 x 10^-1	76	65	50	48	53.90%	48.98%	141	98	RefGen V2	χ2 p-value for B73 x Mo17: '.3542552' χ2 p-value for Mo17 x B73: '.8398929' Biased in favor of strain: ''
GRMZM2G000271	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	2	0	100.00%	0.00%	5	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G000268	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.07 x 10^-11	85	0	23	0	100.00%	0.00%	85	23	RefGen V2	χ2 p-value for B73 x Mo17: '7.07e-11' χ2 p-value for Mo17 x B73: '1.18e-11' Biased in favor of strain: 'B73'
GRMZM2G000268	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	477	99	436	105	82.81%	19.41%	576	541	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G000264	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1729	300	1410	280	85.21%	16.57%	2029	1690	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G000264	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.45 x 10^-22	1024	266	524	385	79.38%	42.35%	1290	909	RefGen V2	χ2 p-value for B73 x Mo17: '3.45e-22' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G000261	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.127 x 10^-4	2	40	4	47	4.76%	92.16%	42	51	RefGen V2	χ2 p-value for B73 x Mo17: '1.73e-17' χ2 p-value for Mo17 x B73: '.0001127' Biased in favor of strain: 'Mo17'
GRMZM2G000261	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.694171 x 10^-1	9	14	18	19	39.13%	51.35%	23	37	RefGen V2	χ2 p-value for B73 x Mo17: '.2971465' χ2 p-value for Mo17 x B73: '.8694171' Biased in favor of strain: ''
GRMZM2G000254	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.607 x 10^-3	256	319	237	382	44.52%	61.71%	575	619	RefGen V2	χ2 p-value for B73 x Mo17: '.008607' χ2 p-value for Mo17 x B73: '5.61e-09' Biased in favor of strain: 'Mo17'
GRMZM2G000254	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.838686 x 10^-1	9	6	20	15	60.00%	42.86%	15	35	RefGen V2	χ2 p-value for B73 x Mo17: '.5838686' χ2 p-value for Mo17 x B73: '.0028074' Biased in favor of strain: ''
GRMZM2G000245	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.26 x 10^-11	434	426	279	880	50.47%	75.93%	860	1159	RefGen V2	χ2 p-value for B73 x Mo17: '6.84e-24' χ2 p-value for Mo17 x B73: '2.26e-11' Biased in favor of strain: 'Mo17'
GRMZM2G000245	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.359834 x 10^-1	633	551	478	433	53.46%	47.53%	1184	911	RefGen V2	χ2 p-value for B73 x Mo17: '.0171686' χ2 p-value for Mo17 x B73: '.1359834' Biased in favor of strain: ''
GRMZM2G000236	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.33 x 10^-19	322	31	140	24	91.22%	14.63%	353	164	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.33e-19' Biased in favor of strain: 'B73'
GRMZM2G000236	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.52 x 10^-9	106	8	489	147	92.98%	23.11%	114	636	RefGen V2	χ2 p-value for B73 x Mo17: '2.52e-09' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G000231	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173107 x 10^-1	33	33	28	70	50.00%	71.43%	66	98	RefGen V2	χ2 p-value for B73 x Mo17: '.0040746' χ2 p-value for Mo17 x B73: '.3173107' Biased in favor of strain: ''
GRMZM2G000231	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.73 x 10^-15	18	106	20	125	14.52%	86.21%	124	145	RefGen V2	χ2 p-value for B73 x Mo17: '2.73e-15' χ2 p-value for Mo17 x B73: '2.79e-18' Biased in favor of strain: 'Mo17'
GRMZM2G000219	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05152 x 10^-2	31	8	17	5	79.49%	22.73%	39	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0002306' χ2 p-value for Mo17 x B73: '.0105152' Biased in favor of strain: 'B73'
GRMZM2G000219	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		13	0	1	2	100.00%	66.67%	13	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0107877' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G000209	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G000209	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	1	100.00%	50.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G000171	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5751 x 10^-3	441	352	492	327	55.61%	39.93%	793	819	RefGen V2	χ2 p-value for B73 x Mo17: '.0015751' χ2 p-value for Mo17 x B73: '8.14e-09' Biased in favor of strain: 'B73'
GRMZM2G000171	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.498371 x 10^-1	376	292	256	530	56.29%	67.43%	668	786	RefGen V2	χ2 p-value for B73 x Mo17: '1.26e-08' χ2 p-value for Mo17 x B73: '.6498371' Biased in favor of strain: ''
GRMZM2G000166	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G000166	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	1	0	25.00%	0.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G000158	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.9118 x 10^-3	49	26	28	60	65.33%	68.18%	75	88	RefGen V2	χ2 p-value for B73 x Mo17: '.0079118' χ2 p-value for Mo17 x B73: '.0006467' Biased in favor of strain: ''
GRMZM2G000158	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.1699 x 10^-3	204	36	60	75	85.00%	55.56%	240	135	RefGen V2	χ2 p-value for B73 x Mo17: '1.69e-09' χ2 p-value for Mo17 x B73: '.0061699' Biased in favor of strain: 'B73'
GRMZM2G000126	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G000126	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	3	2	1	66.67%	33.33%	9	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G000093	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.154739 x 10^-1	274	251	289	246	52.19%	45.98%	525	535	RefGen V2	χ2 p-value for B73 x Mo17: '.3154739' χ2 p-value for Mo17 x B73: '.0630198' Biased in favor of strain: ''
GRMZM2G000093	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.113921 x 10^-1	65	22	91	129	74.71%	58.64%	87	220	RefGen V2	χ2 p-value for B73 x Mo17: '.1113921' χ2 p-value for Mo17 x B73: '.0115147' Biased in favor of strain: ''
GRMZM2G000071	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.32 x 10^-8	0	26	0	60	0.00%	100.00%	26	60	RefGen V2	χ2 p-value for B73 x Mo17: '5.55e-13' χ2 p-value for Mo17 x B73: '4.32e-08' Biased in favor of strain: 'Mo17'
GRMZM2G000071	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.03 x 10^-7	0	27	0	27	0.00%	100.00%	27	27	RefGen V2	χ2 p-value for B73 x Mo17: '2.03e-07' χ2 p-value for Mo17 x B73: '2.03e-07' Biased in favor of strain: 'Mo17'
GRMZM2G000052	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.060348 x 10^-1	428	382	448	355	52.84%	44.21%	810	803	RefGen V2	χ2 p-value for B73 x Mo17: '.1060348' χ2 p-value for Mo17 x B73: '.0010311' Biased in favor of strain: ''
GRMZM2G000052	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.001343 x 10^-1	75	66	43	84	53.19%	66.14%	141	127	RefGen V2	χ2 p-value for B73 x Mo17: '.0006879' χ2 p-value for Mo17 x B73: '.9001343' Biased in favor of strain: ''
GRMZM2G000039	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.7 x 10^-16	1067	319	665	772	76.98%	53.72%	1386	1437	RefGen V2	χ2 p-value for B73 x Mo17: '3.70e-16' χ2 p-value for Mo17 x B73: '2.27e-25' Biased in favor of strain: 'B73'
GRMZM2G000039	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1459	771	1250	698	65.43%	35.83%	2230	1948	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '6.86e-36' Biased in favor of strain: 'B73'
GRMZM2G000014	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1612 x 10^-3	283	217	293	185	56.60%	38.70%	500	478	RefGen V2	χ2 p-value for B73 x Mo17: '.0031612' χ2 p-value for Mo17 x B73: '7.82e-07' Biased in favor of strain: 'B73'
GRMZM2G000014	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.327 x 10^-3	200	57	95	128	77.82%	57.40%	257	223	RefGen V2	χ2 p-value for B73 x Mo17: '.0001487' χ2 p-value for Mo17 x B73: '.003327' Biased in favor of strain: 'B73'
EF517601.1_FG025	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.509822 x 10^-1	47	11	9	13	81.03%	59.09%	58	22	RefGen V2	χ2 p-value for B73 x Mo17: '.020278' χ2 p-value for Mo17 x B73: '.4509822' Biased in favor of strain: ''
EF517601.1_FG025	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	4	2	0.00%	33.33%	2	6	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: ''
EF517601.1_FG015	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.531604 x 10^-1	12	17	20	13	41.38%	39.39%	29	33	RefGen V2	χ2 p-value for B73 x Mo17: '.3531604' χ2 p-value for Mo17 x B73: '.2230175' Biased in favor of strain: ''
EF517601.1_FG015	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.333978 x 10^-1	41	25	20	23	62.12%	53.49%	66	43	RefGen V2	χ2 p-value for B73 x Mo17: '.4333978' χ2 p-value for Mo17 x B73: '.0667792' Biased in favor of strain: ''
EF517601.1_FG012	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.237677 x 10^-1	35	26	54	59	57.38%	52.21%	61	113	RefGen V2	χ2 p-value for B73 x Mo17: '.1237677' χ2 p-value for Mo17 x B73: '.0011164' Biased in favor of strain: ''
EF517601.1_FG012	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.04096 x 10^-2	44	62	79	55	41.51%	41.04%	106	134	RefGen V2	χ2 p-value for B73 x Mo17: '.0804096' χ2 p-value for Mo17 x B73: '.0381458' Biased in favor of strain: ''
EF517601.1_FG010	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.0546 x 10^-2	33	7	24	13	82.50%	35.14%	40	37	RefGen V2	χ2 p-value for B73 x Mo17: '.0000394' χ2 p-value for Mo17 x B73: '.070546' Biased in favor of strain: ''
EF517601.1_FG010	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.69337 x 10^-2	68	13	30	37	83.95%	55.22%	81	67	RefGen V2	χ2 p-value for B73 x Mo17: '.0009675' χ2 p-value for Mo17 x B73: '.0469337' Biased in favor of strain: ''
AY542798.1_FG003	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.98 x 10^-8	604	424	517	324	58.75%	38.53%	1028	841	RefGen V2	χ2 p-value for B73 x Mo17: '1.98e-08' χ2 p-value for Mo17 x B73: '2.83e-11' Biased in favor of strain: 'B73'
AY542798.1_FG003	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.48 x 10^-24	729	151	447	357	82.84%	44.40%	880	804	RefGen V2	χ2 p-value for B73 x Mo17: '2.48e-24' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
AY530952.1_FG001	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	12	4	100.00%	25.00%	4	16	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: ''
AY530952.1_FG001	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.0527 x 10^-3	198	146	208	130	57.56%	38.46%	344	338	RefGen V2	χ2 p-value for B73 x Mo17: '.0050527' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: 'B73'
AF546188.1_FG005	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	13934	0	3844	0	100.00%	0.00%	13934	3844	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
AF546188.1_FG005	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	68379	1	16112	0	100.00%	0.00%	68380	16112	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
AF546188.1_FG001	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.273291 x 10^-1	1273	667	640	2022	65.62%	75.96%	1940	2662	RefGen V2	χ2 p-value for B73 x Mo17: '.3273291' χ2 p-value for Mo17 x B73: '2.72e-24' Biased in favor of strain: ''
AF546188.1_FG001	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.391 x 10^-4	107	63	29	82	62.94%	73.87%	170	111	RefGen V2	χ2 p-value for B73 x Mo17: '.0007391' χ2 p-value for Mo17 x B73: '4.89e-07' Biased in favor of strain: ''
AF546187.1_FG012	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.226781 x 10^-1	25	31	2	34	44.64%	94.44%	56	36	RefGen V2	χ2 p-value for B73 x Mo17: '.4226781' χ2 p-value for Mo17 x B73: '9.64e-08' Biased in favor of strain: ''
AF546187.1_FG012	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.332485 x 10^-1	82	32	42	45	71.93%	51.72%	114	87	RefGen V2	χ2 p-value for B73 x Mo17: '.2332485' χ2 p-value for Mo17 x B73: '.0031107' Biased in favor of strain: ''
AF546187.1_FG009	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999774 x 10^-1	16	8	8	9	66.67%	52.94%	24	17	RefGen V2	χ2 p-value for B73 x Mo17: '.9999774' χ2 p-value for Mo17 x B73: '.229949' Biased in favor of strain: ''
AF546187.1_FG009	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	1		50.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''

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