GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G001221	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.94359 x 10^-2	57	36	25	60	61.29%	70.59%	93	85	RefGen V2	χ2 p-value for B73 x Mo17: '.0294359' χ2 p-value for Mo17 x B73: '.0001469' Biased in favor of strain: ''
GRMZM2G001221	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.83 x 10^-5	483	340	166	480	58.69%	74.30%	823	646	RefGen V2	χ2 p-value for B73 x Mo17: '1.20e-06' χ2 p-value for Mo17 x B73: '.0000383' Biased in favor of strain: 'Mo17'
GRMZM2G001200	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	0	100.00%	0.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G001200	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.9049 x 10^-2	13	4	14	0	76.47%	0.00%	17	14	RefGen V2	χ2 p-value for B73 x Mo17: '.029049' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: 'B73'
GRMZM2G001191	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.6079 x 10^-2	264	172	189	158	60.55%	45.53%	436	347	RefGen V2	χ2 p-value for B73 x Mo17: '.0000105' χ2 p-value for Mo17 x B73: '.096079' Biased in favor of strain: ''
GRMZM2G001191	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.8 x 10^-9	476	135	333	300	77.91%	47.39%	611	633	RefGen V2	χ2 p-value for B73 x Mo17: '3.80e-09' χ2 p-value for Mo17 x B73: '8.11e-25' Biased in favor of strain: 'B73'
GRMZM2G001169	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.497222 x 10^-1	88	38	37	63	69.84%	63.00%	126	100	RefGen V2	χ2 p-value for B73 x Mo17: '.4497222' χ2 p-value for Mo17 x B73: '.4366763' Biased in favor of strain: ''
GRMZM2G001169	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8 x 10^-13	432	241	460	224	64.19%	32.75%	673	684	RefGen V2	χ2 p-value for B73 x Mo17: '1.80e-13' χ2 p-value for Mo17 x B73: '1.82e-19' Biased in favor of strain: 'B73'
GRMZM2G001160	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.502 x 10^-3	208	121	171	125	63.22%	42.23%	329	296	RefGen V2	χ2 p-value for B73 x Mo17: '1.61e-06' χ2 p-value for Mo17 x B73: '.007502' Biased in favor of strain: 'B73'
GRMZM2G001160	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.45492 x 10^-2	133	50	98	97	72.68%	49.74%	183	195	RefGen V2	χ2 p-value for B73 x Mo17: '.0845492' χ2 p-value for Mo17 x B73: '5.36e-07' Biased in favor of strain: ''
GRMZM2G001131	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	5	0	8	0.00%	100.00%	5	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G001131	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	5	0	9	0.00%	100.00%	5	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: ''
GRMZM2G001116	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.795001 x 10^-1	18	14	24	10	56.25%	29.41%	32	34	RefGen V2	χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.0163512' Biased in favor of strain: ''
GRMZM2G001116	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	2	1	6	81.82%	85.71%	11	7	RefGen V2	χ2 p-value for B73 x Mo17: '.2864275' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: ''
GRMZM2G001114	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.003433 x 10^-1	7	8	2	17	46.67%	89.47%	15	19	RefGen V2	χ2 p-value for B73 x Mo17: '.1003433' χ2 p-value for Mo17 x B73: '.0349551' Biased in favor of strain: ''
GRMZM2G001114	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.092938 x 10^-1	29	61	43	51	32.22%	54.26%	90	94	RefGen V2	χ2 p-value for B73 x Mo17: '.0007433' χ2 p-value for Mo17 x B73: '.4092938' Biased in favor of strain: ''
GRMZM2G001106	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	10	15	26	18	40.00%	40.91%	25	44	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.2278' Biased in favor of strain: ''
GRMZM2G001106	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G001097	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7073 x 10^-1	57	20	36	11	74.03%	23.40%	77	47	RefGen V2	χ2 p-value for B73 x Mo17: '.17073' χ2 p-value for Mo17 x B73: '3.14e-10' Biased in favor of strain: ''
GRMZM2G001097	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0394 x 10^-3	44	15	31	10	74.58%	24.39%	59	41	RefGen V2	χ2 p-value for B73 x Mo17: '.0001597' χ2 p-value for Mo17 x B73: '.0010394' Biased in favor of strain: 'B73'
GRMZM2G001088	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2639	861	2712	796	75.40%	22.69%	3500	3508	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G001088	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1931	403	990	882	82.73%	47.12%	2334	1872	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G001084	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	1	100.00%	33.33%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: ''
GRMZM2G001084	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G001079	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.36 x 10^-6	83	26	63	20	76.15%	24.10%	109	83	RefGen V2	χ2 p-value for B73 x Mo17: '4.77e-08' χ2 p-value for Mo17 x B73: '2.36e-06' Biased in favor of strain: 'B73'
GRMZM2G001079	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.880246 x 10^-1	99	53	19	99	65.13%	83.90%	152	118	RefGen V2	χ2 p-value for B73 x Mo17: '.6880246' χ2 p-value for Mo17 x B73: '.0000716' Biased in favor of strain: ''
GRMZM2G001048	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.97 x 10^-6	99	16	63	34	86.09%	35.05%	115	97	RefGen V2	χ2 p-value for B73 x Mo17: '9.97e-06' χ2 p-value for Mo17 x B73: '3.97e-11' Biased in favor of strain: 'B73'
GRMZM2G001048	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	630	242	718	272	72.25%	27.47%	872	990	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G001033	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.59 x 10^-14	611	302	430	236	66.92%	35.44%	913	666	RefGen V2	χ2 p-value for B73 x Mo17: '1.51e-24' χ2 p-value for Mo17 x B73: '5.59e-14' Biased in favor of strain: 'B73'
GRMZM2G001033	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.551663 x 10^-1	282	152	165	233	64.98%	58.54%	434	398	RefGen V2	χ2 p-value for B73 x Mo17: '.4551663' χ2 p-value for Mo17 x B73: '.0005859' Biased in favor of strain: ''
GRMZM2G001024	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	889	154	518	338	85.23%	39.49%	1043	856	RefGen V2	χ2 p-value for B73 x Mo17: '4.53e-37' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G001024	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0 x 10^-30	583	226	510	204	72.06%	28.57%	809	714	RefGen V2	χ2 p-value for B73 x Mo17: '3.90e-36' χ2 p-value for Mo17 x B73: '2.30e-30' Biased in favor of strain: 'B73'
GRMZM2G000980	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.475608 x 10^-1	293	219	192	170	57.23%	46.96%	512	362	RefGen V2	χ2 p-value for B73 x Mo17: '.0010741' χ2 p-value for Mo17 x B73: '.2475608' Biased in favor of strain: ''
GRMZM2G000980	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.357535 x 10^-1	220	124	128	235	63.95%	64.74%	344	363	RefGen V2	χ2 p-value for B73 x Mo17: '.2857094' χ2 p-value for Mo17 x B73: '.4357535' Biased in favor of strain: ''
GRMZM2G000976	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.55784 x 10^-1	126	60	66	122	67.74%	64.89%	186	188	RefGen V2	χ2 p-value for B73 x Mo17: '.755784' χ2 p-value for Mo17 x B73: '.606056' Biased in favor of strain: ''
GRMZM2G000976	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.781387 x 10^-1	76	85	66	49	47.20%	42.61%	161	115	RefGen V2	χ2 p-value for B73 x Mo17: '.4781387' χ2 p-value for Mo17 x B73: '.1129077' Biased in favor of strain: ''
GRMZM2G000973	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.57 x 10^-17	257	99	331	94	72.19%	22.12%	356	425	RefGen V2	χ2 p-value for B73 x Mo17: '5.57e-17' χ2 p-value for Mo17 x B73: '1.38e-30' Biased in favor of strain: 'B73'
GRMZM2G000973	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.922 x 10^-4	242	35	114	147	87.36%	56.32%	277	261	RefGen V2	χ2 p-value for B73 x Mo17: '2.72e-13' χ2 p-value for Mo17 x B73: '.0003922' Biased in favor of strain: 'B73'
GRMZM2G000964	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.15925 x 10^-1	3	10	3	13	23.08%	81.25%	13	16	RefGen V2	χ2 p-value for B73 x Mo17: '.0008561' χ2 p-value for Mo17 x B73: '.215925' Biased in favor of strain: ''
GRMZM2G000964	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.276258 x 10^-1	41	24	32	36	63.08%	52.94%	65	68	RefGen V2	χ2 p-value for B73 x Mo17: '.0349799' χ2 p-value for Mo17 x B73: '.6276258' Biased in favor of strain: ''
GRMZM2G000959	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	5	2	4	58.33%	66.67%	12	6	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: ''
GRMZM2G000959	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G000937	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.962 x 10^-4	94	16	45	45	85.45%	50.00%	110	90	RefGen V2	χ2 p-value for B73 x Mo17: '.0000292' χ2 p-value for Mo17 x B73: '.0007962' Biased in favor of strain: 'B73'
GRMZM2G000937	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.77 x 10^-8	113	210	158	301	34.98%	65.58%	323	459	RefGen V2	χ2 p-value for B73 x Mo17: '6.77e-08' χ2 p-value for Mo17 x B73: '2.48e-11' Biased in favor of strain: 'Mo17'
GRMZM2G000932	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.555708 x 10^-1	80	99	155	122	44.69%	44.04%	179	277	RefGen V2	χ2 p-value for B73 x Mo17: '.1555708' χ2 p-value for Mo17 x B73: '.0473923' Biased in favor of strain: ''
GRMZM2G000932	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.801686 x 10^-1	4	11	7	15	26.67%	68.18%	15	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0010149' χ2 p-value for Mo17 x B73: '.8801686' Biased in favor of strain: ''
GRMZM2G000923	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.21 x 10^-5	1514	626	973	1321	70.75%	57.59%	2140	2294	RefGen V2	χ2 p-value for B73 x Mo17: '.0000621' χ2 p-value for Mo17 x B73: '2.78e-20' Biased in favor of strain: 'B73'
GRMZM2G000923	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.37 x 10^-5	1245	1016	1203	1008	55.06%	45.59%	2261	2211	RefGen V2	χ2 p-value for B73 x Mo17: '1.46e-06' χ2 p-value for Mo17 x B73: '.0000337' Biased in favor of strain: 'B73'
GRMZM2G000909	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.13 x 10^-13	196	74	204	77	72.59%	27.40%	270	281	RefGen V2	χ2 p-value for B73 x Mo17: '1.13e-13' χ2 p-value for Mo17 x B73: '3.56e-14' Biased in favor of strain: 'B73'
GRMZM2G000909	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.5 x 10^-5	188	50	107	121	78.99%	53.07%	238	228	RefGen V2	χ2 p-value for B73 x Mo17: '.000055' χ2 p-value for Mo17 x B73: '.0000133' Biased in favor of strain: 'B73'
GRMZM2G000829	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.11176 x 10^-2	3	11	3	25	21.43%	89.29%	14	28	RefGen V2	χ2 p-value for B73 x Mo17: '.0003298' χ2 p-value for Mo17 x B73: '.0111176' Biased in favor of strain: ''
GRMZM2G000829	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	14	1	8	6.67%	88.89%	15	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0007891' χ2 p-value for Mo17 x B73: '.0196307' Biased in favor of strain: ''
GRMZM2G000823	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.917559 x 10^-1	527	404	430	434	56.61%	50.23%	931	864	RefGen V2	χ2 p-value for B73 x Mo17: '.0000555' χ2 p-value for Mo17 x B73: '.8917559' Biased in favor of strain: ''
GRMZM2G000823	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.523 x 10^-4	1328	548	878	1383	70.79%	61.17%	1876	2261	RefGen V2	χ2 p-value for B73 x Mo17: '.0001523' χ2 p-value for Mo17 x B73: '2.91e-08' Biased in favor of strain: 'B73'
GRMZM2G000818	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.86476 x 10^-1	66	23	21	33	74.16%	61.11%	89	54	RefGen V2	χ2 p-value for B73 x Mo17: '.1338675' χ2 p-value for Mo17 x B73: '.386476' Biased in favor of strain: ''
GRMZM2G000818	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.997413 x 10^-1	52	27	32	31	65.82%	49.21%	79	63	RefGen V2	χ2 p-value for B73 x Mo17: '.0049124' χ2 p-value for Mo17 x B73: '.8997413' Biased in favor of strain: ''
GRMZM2G000816	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.022 x 10^-3	18	2	26	8	90.00%	23.53%	20	34	RefGen V2	χ2 p-value for B73 x Mo17: '.0003466' χ2 p-value for Mo17 x B73: '.002022' Biased in favor of strain: 'B73'
GRMZM2G000816	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		30	2	0	0	93.75%		32	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G000812	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	1	100.00%	100.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G000812	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	1	4	4	90.00%	50.00%	10	8	RefGen V2	χ2 p-value for B73 x Mo17: '.011412' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G000777	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.693965 x 10^-1	381	344	370	331	52.55%	47.22%	725	701	RefGen V2	χ2 p-value for B73 x Mo17: '.1693965' χ2 p-value for Mo17 x B73: '.1407484' Biased in favor of strain: ''
GRMZM2G000777	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.97 x 10^-8	616	198	312	352	75.68%	53.01%	814	664	RefGen V2	χ2 p-value for B73 x Mo17: '4.97e-08' χ2 p-value for Mo17 x B73: '8.40e-14' Biased in favor of strain: 'B73'
GRMZM2G000764	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	5	11	50.00%	68.75%	2	16	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.8596839' Biased in favor of strain: ''
GRMZM2G000764	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.296193 x 10^-1	144	117	107	98	55.17%	47.80%	261	205	RefGen V2	χ2 p-value for B73 x Mo17: '.0946707' χ2 p-value for Mo17 x B73: '.5296193' Biased in favor of strain: ''
GRMZM2G000741	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.32 x 10^-19	775	288	493	249	72.91%	33.56%	1063	742	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.32e-19' Biased in favor of strain: 'B73'
GRMZM2G000741	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.02 x 10^-14	2620	911	1277	1934	74.20%	60.23%	3531	3211	RefGen V2	χ2 p-value for B73 x Mo17: '2.19e-21' χ2 p-value for Mo17 x B73: '1.02e-14' Biased in favor of strain: 'B73'
GRMZM2G000737	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	8	1	4	0.00%	80.00%	8	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: ''
GRMZM2G000737	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.73 x 10^-6	1	27	0	22	3.57%	100.00%	28	22	RefGen V2	χ2 p-value for B73 x Mo17: '8.94e-07' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: 'Mo17'
GRMZM2G000718	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.514759 x 10^-1	196	245	209	197	44.44%	48.52%	441	406	RefGen V2	χ2 p-value for B73 x Mo17: '.0196307' χ2 p-value for Mo17 x B73: '.5514759' Biased in favor of strain: ''
GRMZM2G000718	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.185473 x 10^-1	128	63	56	183	67.02%	76.57%	191	239	RefGen V2	χ2 p-value for B73 x Mo17: '.9185473' χ2 p-value for Mo17 x B73: '.0011644' Biased in favor of strain: ''
GRMZM2G000710	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.38 x 10^-14	948	283	488	593	77.01%	54.86%	1231	1081	RefGen V2	χ2 p-value for B73 x Mo17: '1.38e-14' χ2 p-value for Mo17 x B73: '1.77e-16' Biased in favor of strain: 'B73'
GRMZM2G000710	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1465	796	1520	838	64.79%	35.54%	2261	2358	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G000686	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	431	128	537	138	77.10%	20.44%	559	675	RefGen V2	χ2 p-value for B73 x Mo17: '1.34e-37' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G000686	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.927 x 10^-4	132	35	56	48	79.04%	46.15%	167	104	RefGen V2	χ2 p-value for B73 x Mo17: '.0006927' χ2 p-value for Mo17 x B73: '9.10e-06' Biased in favor of strain: 'B73'
GRMZM2G000674	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999593 x 10^-1	52	26	19	57	66.67%	75.00%	78	76	RefGen V2	χ2 p-value for B73 x Mo17: '.9999593' χ2 p-value for Mo17 x B73: '.1232917' Biased in favor of strain: ''
GRMZM2G000674	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.62 x 10^-5	171	71	152	87	70.66%	36.40%	242	239	RefGen V2	χ2 p-value for B73 x Mo17: '1.29e-10' χ2 p-value for Mo17 x B73: '.0000262' Biased in favor of strain: 'B73'
GRMZM2G000665	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	4	9	8	42.86%	47.06%	7	17	RefGen V2	χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.8083652' Biased in favor of strain: ''
GRMZM2G000665	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	3	2		40.00%	0	5	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G000660	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	6	1	100.00%	14.29%	2	7	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0032835' Biased in favor of strain: ''
GRMZM2G000660	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.93 x 10^-4	20	3	21	3	86.96%	12.50%	23	24	RefGen V2	χ2 p-value for B73 x Mo17: '.000393' χ2 p-value for Mo17 x B73: '.0002386' Biased in favor of strain: 'B73'
GRMZM2G000650	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	1	100.00%	33.33%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G000650	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	1	0	100.00%	0.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G000633	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.054693 x 10^-1	10	4	15	8	71.43%	34.78%	14	23	RefGen V2	χ2 p-value for B73 x Mo17: '.7054693' χ2 p-value for Mo17 x B73: '.0011798' Biased in favor of strain: ''
GRMZM2G000633	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.104944 x 10^-1	94	65	76	64	59.12%	45.71%	159	140	RefGen V2	χ2 p-value for B73 x Mo17: '.0214567' χ2 p-value for Mo17 x B73: '.3104944' Biased in favor of strain: ''
GRMZM2G000623	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	0	0	66.67%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G000623	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G000620	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		15	0	3	0	100.00%	0.00%	15	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0061701' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G000620	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G000615	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.6037 x 10^-3	339	265	300	220	56.13%	42.31%	604	520	RefGen V2	χ2 p-value for B73 x Mo17: '.0026037' χ2 p-value for Mo17 x B73: '.0004511' Biased in favor of strain: 'B73'
GRMZM2G000615	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.332572 x 10^-1	299	132	156	270	69.37%	63.38%	431	426	RefGen V2	χ2 p-value for B73 x Mo17: '.2332572' χ2 p-value for Mo17 x B73: '.1501796' Biased in favor of strain: ''
GRMZM2G000614	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.880878 x 10^-1	19	7	14	36	73.08%	72.00%	26	50	RefGen V2	χ2 p-value for B73 x Mo17: '.4880878' χ2 p-value for Mo17 x B73: '.423711' Biased in favor of strain: ''
GRMZM2G000614	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.118355 x 10^-1	52	37	80	29	58.43%	26.61%	89	109	RefGen V2	χ2 p-value for B73 x Mo17: '.1118355' χ2 p-value for Mo17 x B73: '1.03e-06' Biased in favor of strain: ''
GRMZM2G000601	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.22 x 10^-14	125	25	127	31	83.33%	19.62%	150	158	RefGen V2	χ2 p-value for B73 x Mo17: '3.22e-16' χ2 p-value for Mo17 x B73: '2.22e-14' Biased in favor of strain: 'B73'
GRMZM2G000601	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	2	100.00%	100.00%	4	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G000593	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5 x 10^-5	109	17	34	23	86.51%	40.35%	126	57	RefGen V2	χ2 p-value for B73 x Mo17: '2.31e-06' χ2 p-value for Mo17 x B73: '.000025' Biased in favor of strain: 'B73'
GRMZM2G000593	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.64 x 10^-21	231	46	192	47	83.39%	19.67%	277	239	RefGen V2	χ2 p-value for B73 x Mo17: '1.05e-28' χ2 p-value for Mo17 x B73: '6.64e-21' Biased in favor of strain: 'B73'
GRMZM2G000581	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	2	1	83.33%	33.33%	6	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G000581	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.84605 x 10^-2	14	1	15	4	93.33%	21.05%	15	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0284605' χ2 p-value for Mo17 x B73: '.0000247' Biased in favor of strain: ''
GRMZM2G000576	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	4	8	6	42.86%	42.86%	7	14	RefGen V2	χ2 p-value for B73 x Mo17: '.1814437' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: ''
GRMZM2G000576	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.055406 x 10^-1	39	32	34	32	54.93%	48.48%	71	66	RefGen V2	χ2 p-value for B73 x Mo17: '.4061165' χ2 p-value for Mo17 x B73: '.8055406' Biased in favor of strain: ''

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