Displaying data sets 35601 - 35700 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G06400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.49887 x 10-1 12 6 1 2 66.67% 66.67% 18 3 TAIR8 Avg. embryo expression (dissected): '8.20497'
Avg. embryo expression (LCM): '5.2746'
AT5G06400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0267 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06390 FLA17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.96986 x 10-1 103 58 61 154 63.98% 71.63% 161 215 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.886987'
Avg. expression score for this sample: '128.601'
Avg. expression score in LCM sample: '70.256'
Tissue used: 'pure endosperm, no chalazal'
AT5G06390 FLA17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.52407 x 10-1 195 140 72 223 58.21% 75.59% 335 295 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.886987'
Avg. expression score for this sample: '223.453'
Avg. expression score in LCM sample: '70.256'
Tissue used: 'full endosperm'
AT5G06390 FLA17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.5362 x 10-1 79 113 47 46 41.15% 49.46% 192 93 TAIR8 Avg. embryo expression (dissected): '146.172'
Avg. embryo expression (LCM): '123.627'
AT5G06390 FLA17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.7657 x 10-2 86 24 78.18% 110 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06390 FLA17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.1 x 10-18 175 9 95.11% 184 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06390 FLA17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9 x 10-19 191 10 95.02% 201 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.40763'
Avg. expression score in LCM sample: '36.4802'
Tissue used: 'pure endosperm, no chalazal'
AT5G06380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.892703'
Avg. expression score in LCM sample: '36.4802'
Tissue used: 'full endosperm'
AT5G06380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.60046'
Avg. embryo expression (LCM): '9.09241'
AT5G06380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '449.072'
Avg. expression score in LCM sample: '167.115'
Tissue used: 'pure endosperm, no chalazal'
AT5G06370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '360.577'
Avg. expression score in LCM sample: '167.115'
Tissue used: 'full endosperm'
AT5G06370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '177.189'
Avg. embryo expression (LCM): '35.9803'
AT5G06370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.47727 x 10-1 40 8 9 7 83.33% 43.75% 48 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.178952'
Avg. expression score for this sample: '122.053'
Avg. expression score in LCM sample: '37.024'
Tissue used: 'pure endosperm, no chalazal'
AT5G06360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.97942 x 10-1 107 24 66 113 81.68% 63.13% 131 179 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.178952'
Avg. expression score for this sample: '197.326'
Avg. expression score in LCM sample: '37.024'
Tissue used: 'full endosperm'
AT5G06360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.8272 x 10-2 60 19 13 2 75.95% 13.33% 79 15 TAIR8 Avg. embryo expression (dissected): '273.693'
Avg. embryo expression (LCM): '597.474'
AT5G06360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.49485 x 10-1 24 14 63.16% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.144 x 10-3 88 66 57.14% 154 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.6 x 10-8 188 21 89.95% 209 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.8665'
Avg. expression score in LCM sample: '20.8857'
Tissue used: 'pure endosperm, no chalazal'
AT5G06350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '34.0358'
Avg. expression score in LCM sample: '20.8857'
Tissue used: 'full endosperm'
AT5G06350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '36.3853'
Avg. embryo expression (LCM): '53.1102'
AT5G06350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06340 NUDX27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '29.1503'
Avg. expression score in LCM sample: '14.9625'
Tissue used: 'pure endosperm, no chalazal'
AT5G06340 NUDX27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.10777 x 10-1 8 0 1 2 100.00% 66.67% 8 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '63.8813'
Avg. expression score in LCM sample: '14.9625'
Tissue used: 'full endosperm'
AT5G06340 NUDX27 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Avg. embryo expression (dissected): '63.7759'
Avg. embryo expression (LCM): '72.89'
AT5G06340 NUDX27 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06340 NUDX27 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.14706 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06340 NUDX27 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.5556'
Avg. expression score in LCM sample: '64.9648'
Tissue used: 'pure endosperm, no chalazal'
AT5G06330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.9224'
Avg. expression score in LCM sample: '64.9648'
Tissue used: 'full endosperm'
AT5G06330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.46417'
Avg. embryo expression (LCM): '0'
AT5G06330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06320 NHL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.59991 x 10-1 106 69 36 148 60.57% 80.43% 175 184 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '840.17'
Avg. expression score in LCM sample: '37.6855'
Tissue used: 'pure endosperm, no chalazal'
AT5G06320 NHL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 410 95 166 1439 81.19% 89.66% 505 1605 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1706.3'
Avg. expression score in LCM sample: '37.6855'
Tissue used: 'full endosperm'
AT5G06320 NHL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.70898 x 10-1 97 127 9 8 43.30% 47.06% 224 17 TAIR8 Avg. embryo expression (dissected): '705.239'
Avg. embryo expression (LCM): '66.9749'
AT5G06320 NHL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.31963 x 10-1 164 22 88.17% 186 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06320 NHL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1 x 10-12 718 45 94.10% 763 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06320 NHL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9 x 10-12 954 68 93.35% 1022 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06310 AtPOT1b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 3 1 3 66.67% 75.00% 9 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.122199'
Avg. expression score for this sample: '11.7005'
Avg. expression score in LCM sample: '.925969'
Tissue used: 'pure endosperm, no chalazal'
AT5G06310 AtPOT1b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.13585 x 10-1 27 1 5 7 96.43% 58.33% 28 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.122199'
Avg. expression score for this sample: '15.2798'
Avg. expression score in LCM sample: '.925969'
Tissue used: 'full endosperm'
AT5G06310 AtPOT1b embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37186 x 10-1 4 0 3 2 100.00% 40.00% 4 5 TAIR8 Avg. embryo expression (dissected): '12.7555'
Avg. embryo expression (LCM): '14.2414'
AT5G06310 AtPOT1b endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.62963 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06310 AtPOT1b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3923 x 10-2 12 10 54.55% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06310 AtPOT1b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 52 13 80.00% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06300 LOG7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.24511'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G06300 LOG7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.54416'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G06300 LOG7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '27.006'
Avg. embryo expression (LCM): '24.2255'
AT5G06300 LOG7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06300 LOG7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06300 LOG7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06290 2-Cys Prx B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.72918 x 10-1 40 3 11 10 93.02% 47.62% 43 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.371933'
Avg. expression score for this sample: '51.7725'
Avg. expression score in LCM sample: '27.0295'
Tissue used: 'pure endosperm, no chalazal'
AT5G06290 2-Cys Prx B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.08432 x 10-1 67 16 39 50 80.72% 56.18% 83 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.371933'
Avg. expression score for this sample: '73.2338'
Avg. expression score in LCM sample: '27.0295'
Tissue used: 'full endosperm'
AT5G06290 2-Cys Prx B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.30655 x 10-1 28 28 15 7 50.00% 31.82% 56 22 TAIR8 Avg. embryo expression (dissected): '113.276'
Avg. embryo expression (LCM): '105.002'
AT5G06290 2-Cys Prx B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.33196 x 10-1 7 7 50.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06290 2-Cys Prx B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.19 x 10-3 34 31 52.31% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06290 2-Cys Prx B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 33 14 70.21% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 14 0 8 4 100.00% 33.33% 14 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.580761'
Avg. expression score for this sample: '9.24221'
Avg. expression score in LCM sample: '1.49919'
Tissue used: 'pure endosperm, no chalazal'
AT5G06280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.81761 x 10-1 16 3 14 5 84.21% 26.32% 19 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.580761'
Avg. expression score for this sample: '7.66488'
Avg. expression score in LCM sample: '1.49919'
Tissue used: 'full endosperm'
AT5G06280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 13 6 6 0 68.42% 0.00% 19 6 TAIR8 Avg. embryo expression (dissected): '14.7212'
Avg. embryo expression (LCM): '10.2604'
AT5G06280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.26455 x 10-1 62 65 48.82% 127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.50253 x 10-1 21 6 77.78% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '19.7362'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G06270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.496'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G06270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '47.9464'
Avg. embryo expression (LCM): '43.2266'
AT5G06270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06265 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 2 66.67% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.280579'
Avg. expression score for this sample: '83.6502'
Avg. expression score in LCM sample: '9.97988'
Tissue used: 'pure endosperm, no chalazal'
AT5G06265 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.24503 x 10-1 6 1 1 9 85.71% 90.00% 7 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.280579'
Avg. expression score for this sample: '96.8368'
Avg. expression score in LCM sample: '9.97988'
Tissue used: 'full endosperm'
AT5G06265 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 1 1 1 75.00% 50.00% 4 2 TAIR8 Avg. embryo expression (dissected): '117.49'
Avg. embryo expression (LCM): '64.8399'
AT5G06265 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06265 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06265 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.68477 x 10-1 155 61 67 162 71.76% 70.74% 216 229 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.4e-09'
Avg. expression score for this sample: '86.2094'
Avg. expression score in LCM sample: '96.5947'
Tissue used: 'pure endosperm, no chalazal'
AT5G06260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8 x 10-9 371 81 155 468 82.08% 75.12% 452 623 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.4e-09'
Avg. expression score for this sample: '154.24'
Avg. expression score in LCM sample: '96.5947'
Tissue used: 'full endosperm'
AT5G06260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.61186 x 10-1 116 84 30 32 58.00% 51.61% 200 62 TAIR8 Avg. embryo expression (dissected): '85.8535'
Avg. embryo expression (LCM): '51.3018'
AT5G06260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.404 x 10-3 164 28 85.42% 192 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.7229 x 10-2 1134 421 72.93% 1555 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1 x 10-22 1206 139 89.67% 1345 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06250 DPA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G06250 DPA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.02631'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G06250 DPA4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '10.0771'
Avg. embryo expression (LCM): '1.44424'
AT5G06250 DPA4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06250 DPA4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G06250 DPA4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'