GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G003389	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1492 x 10^-1	27	7	13	2	79.41%	13.33%	34	15	RefGen V2	χ2 p-value for B73 x Mo17: '.11492' χ2 p-value for Mo17 x B73: '.0000118' Biased in favor of strain: ''
GRMZM2G003389	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.58128 x 10^-2	211	148	201	168	58.77%	45.53%	359	369	RefGen V2	χ2 p-value for B73 x Mo17: '.0008841' χ2 p-value for Mo17 x B73: '.0858128' Biased in favor of strain: ''
GRMZM2G003384	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	6666	2445	5538	2259	73.16%	28.97%	9111	7797	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003384	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	8851	667	4817	1615	92.99%	25.11%	9518	6432	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003379	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.47 x 10^-5	259	75	126	142	77.54%	52.99%	334	268	RefGen V2	χ2 p-value for B73 x Mo17: '.0000247' χ2 p-value for Mo17 x B73: '2.02e-06' Biased in favor of strain: 'B73'
GRMZM2G003379	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.05 x 10^-6	511	319	404	286	61.57%	41.45%	830	690	RefGen V2	χ2 p-value for B73 x Mo17: '2.66e-11' χ2 p-value for Mo17 x B73: '7.05e-06' Biased in favor of strain: 'B73'
GRMZM2G003377	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.42748 x 10^-2	251	203	174	130	55.29%	42.76%	454	304	RefGen V2	χ2 p-value for B73 x Mo17: '.0242748' χ2 p-value for Mo17 x B73: '.0116169' Biased in favor of strain: 'B73'
GRMZM2G003377	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.611493 x 10^-1	232	98	141	169	70.30%	54.52%	330	310	RefGen V2	χ2 p-value for B73 x Mo17: '.1611493' χ2 p-value for Mo17 x B73: '5.67e-06' Biased in favor of strain: ''
GRMZM2G003354	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.48634 x 10^-1	87	31	37	81	73.73%	68.64%	118	118	RefGen V2	χ2 p-value for B73 x Mo17: '.1036701' χ2 p-value for Mo17 x B73: '.648634' Biased in favor of strain: ''
GRMZM2G003354	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.54 x 10^-7	307	171	326	207	64.23%	38.84%	478	533	RefGen V2	χ2 p-value for B73 x Mo17: '4.96e-10' χ2 p-value for Mo17 x B73: '2.54e-07' Biased in favor of strain: 'B73'
GRMZM2G003342	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.44 x 10^-8	202	103	221	100	66.23%	31.15%	305	321	RefGen V2	χ2 p-value for B73 x Mo17: '1.44e-08' χ2 p-value for Mo17 x B73: '1.44e-11' Biased in favor of strain: 'B73'
GRMZM2G003342	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.765 x 10^-4	145	31	60	64	82.39%	51.61%	176	124	RefGen V2	χ2 p-value for B73 x Mo17: '9.69e-06' χ2 p-value for Mo17 x B73: '.0003765' Biased in favor of strain: 'B73'
GRMZM2G003331	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.054297 x 10^-1	36	20	23	61	64.29%	72.62%	56	84	RefGen V2	χ2 p-value for B73 x Mo17: '.7054297' χ2 p-value for Mo17 x B73: '.2471601' Biased in favor of strain: ''
GRMZM2G003331	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.963997 x 10^-1	84	71	39	50	54.19%	56.18%	155	89	RefGen V2	χ2 p-value for B73 x Mo17: '.2963997' χ2 p-value for Mo17 x B73: '.2436154' Biased in favor of strain: ''
GRMZM2G003306	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	13574	8521	12161	6737	61.43%	35.65%	22095	18898	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003306	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2689	832	2189	2796	76.37%	56.09%	3521	4985	RefGen V2	χ2 p-value for B73 x Mo17: '2.61e-34' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003304	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	4		66.67%	0	6	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G003304	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.393165 x 10^-1	10	16	10	29	38.46%	74.36%	26	39	RefGen V2	χ2 p-value for B73 x Mo17: '.2393165' χ2 p-value for Mo17 x B73: '.0023467' Biased in favor of strain: ''
GRMZM2G003289	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.67 x 10^-18	88	3	80	1	96.70%	1.23%	91	81	RefGen V2	χ2 p-value for B73 x Mo17: '5.08e-19' χ2 p-value for Mo17 x B73: '1.67e-18' Biased in favor of strain: 'B73'
GRMZM2G003289	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.53478 x 10^-2	10	0	8	2	100.00%	20.00%	10	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.0017451' Biased in favor of strain: ''
GRMZM2G003252	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.940326 x 10^-1	50	9	13	31	84.75%	70.45%	59	44	RefGen V2	χ2 p-value for B73 x Mo17: '.0032211' χ2 p-value for Mo17 x B73: '.5940326' Biased in favor of strain: ''
GRMZM2G003252	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.229856 x 10^-1	67	63	53	54	51.54%	50.47%	130	107	RefGen V2	χ2 p-value for B73 x Mo17: '.725721' χ2 p-value for Mo17 x B73: '.9229856' Biased in favor of strain: ''
GRMZM2G003190	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4111	1545	3290	1421	72.68%	30.16%	5656	4711	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003190	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3150	706	1599	1064	81.69%	39.95%	3856	2663	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003179	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.1 x 10^-6	82	9	99	29	90.11%	22.66%	91	128	RefGen V2	χ2 p-value for B73 x Mo17: '2.10e-06' χ2 p-value for Mo17 x B73: '4.45e-26' Biased in favor of strain: 'B73'
GRMZM2G003179	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.41 x 10^-19	515	264	914	405	66.11%	30.71%	779	1319	RefGen V2	χ2 p-value for B73 x Mo17: '2.41e-19' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003172	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.35 x 10^-7	683	469	403	269	59.29%	40.03%	1152	672	RefGen V2	χ2 p-value for B73 x Mo17: '2.88e-10' χ2 p-value for Mo17 x B73: '2.35e-07' Biased in favor of strain: 'B73'
GRMZM2G003172	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43091 x 10^-2	264	99	122	133	72.73%	52.16%	363	255	RefGen V2	χ2 p-value for B73 x Mo17: '.0143091' χ2 p-value for Mo17 x B73: '8.87e-07' Biased in favor of strain: ''
GRMZM2G003157	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	2	4	100.00%	66.67%	3	6	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G003157	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	1	7	2	87.50%	22.22%	8	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0338949' χ2 p-value for Mo17 x B73: '.0955807' Biased in favor of strain: ''
GRMZM2G003109	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	1	5	0.00%	83.33%	1	6	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: ''
GRMZM2G003109	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	5	0.00%	100.00%	1	5	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM2G003108	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.833293 x 10^-1	527	307	304	646	63.19%	68.00%	834	950	RefGen V2	χ2 p-value for B73 x Mo17: '.0331429' χ2 p-value for Mo17 x B73: '.3833293' Biased in favor of strain: ''
GRMZM2G003108	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.241299 x 10^-1	424	303	271	308	58.32%	53.20%	727	579	RefGen V2	χ2 p-value for B73 x Mo17: '7.20e-06' χ2 p-value for Mo17 x B73: '.1241299' Biased in favor of strain: ''
GRMZM2G003090	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.36 x 10^-5	205	105	224	143	66.13%	38.96%	310	367	RefGen V2	χ2 p-value for B73 x Mo17: '1.35e-08' χ2 p-value for Mo17 x B73: '.0000236' Biased in favor of strain: 'B73'
GRMZM2G003090	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.083075 x 10^-1	35	21	20	10	62.50%	33.33%	56	30	RefGen V2	χ2 p-value for B73 x Mo17: '.5083075' χ2 p-value for Mo17 x B73: '.0001075' Biased in favor of strain: ''
GRMZM2G003076	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.262486 x 10^-1	163	99	157	126	62.21%	44.52%	262	283	RefGen V2	χ2 p-value for B73 x Mo17: '.1262486' χ2 p-value for Mo17 x B73: '2.74e-15' Biased in favor of strain: ''
GRMZM2G003076	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.65 x 10^-9	130	39	100	31	76.92%	23.66%	169	131	RefGen V2	χ2 p-value for B73 x Mo17: '2.56e-12' χ2 p-value for Mo17 x B73: '1.65e-09' Biased in favor of strain: 'B73'
GRMZM2G003068	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.81 x 10^-26	956	395	804	430	70.76%	34.85%	1351	1234	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.81e-26' Biased in favor of strain: 'B73'
GRMZM2G003068	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.971763 x 10^-1	375	199	213	311	65.33%	59.35%	574	524	RefGen V2	χ2 p-value for B73 x Mo17: '.4971763' χ2 p-value for Mo17 x B73: '.0003818' Biased in favor of strain: ''
GRMZM2G003064	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6 x 10^-10	109	6	57	27	94.78%	32.14%	115	84	RefGen V2	χ2 p-value for B73 x Mo17: '1.60e-10' χ2 p-value for Mo17 x B73: '1.92e-11' Biased in favor of strain: 'B73'
GRMZM2G003064	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1 x 10^-6	108	19	64	21	85.04%	24.71%	127	85	RefGen V2	χ2 p-value for B73 x Mo17: '2.85e-15' χ2 p-value for Mo17 x B73: '3.10e-06' Biased in favor of strain: 'B73'
GRMZM2G003043	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.103466 x 10^-1	56	60	50	32	48.28%	39.02%	116	82	RefGen V2	χ2 p-value for B73 x Mo17: '.7103466' χ2 p-value for Mo17 x B73: '.0468374' Biased in favor of strain: ''
GRMZM2G003043	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.948161 x 10^-1	47	30	40	45	61.04%	52.94%	77	85	RefGen V2	χ2 p-value for B73 x Mo17: '.2948161' χ2 p-value for Mo17 x B73: '.0072665' Biased in favor of strain: ''
GRMZM2G003038	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999332 x 10^-1	140	70	86	96	66.67%	52.75%	210	182	RefGen V2	χ2 p-value for B73 x Mo17: '.9999332' χ2 p-value for Mo17 x B73: '.0000679' Biased in favor of strain: ''
GRMZM2G003038	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.22801 x 10^-1	175	123	118	100	58.72%	45.87%	298	218	RefGen V2	χ2 p-value for B73 x Mo17: '.0025929' χ2 p-value for Mo17 x B73: '.222801' Biased in favor of strain: ''
GRMZM2G003033	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.85 x 10^-7	331	190	323	210	63.53%	39.40%	521	533	RefGen V2	χ2 p-value for B73 x Mo17: '6.52e-10' χ2 p-value for Mo17 x B73: '9.85e-07' Biased in favor of strain: 'B73'
GRMZM2G003033	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.03 x 10^-15	415	83	251	224	83.33%	47.16%	498	475	RefGen V2	χ2 p-value for B73 x Mo17: '3.03e-15' χ2 p-value for Mo17 x B73: '1.89e-19' Biased in favor of strain: 'B73'
GRMZM2G003022	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.46059 x 10^-1	226	103	99	180	68.69%	64.52%	329	279	RefGen V2	χ2 p-value for B73 x Mo17: '.4356276' χ2 p-value for Mo17 x B73: '.446059' Biased in favor of strain: ''
GRMZM2G003022	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.355267 x 10^-1	139	94	94	105	59.66%	52.76%	233	199	RefGen V2	χ2 p-value for B73 x Mo17: '.0031979' χ2 p-value for Mo17 x B73: '.4355267' Biased in favor of strain: ''
GRMZM2G002999	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5716 x 10^-3	107	63	87	50	62.94%	36.50%	170	137	RefGen V2	χ2 p-value for B73 x Mo17: '.0007391' χ2 p-value for Mo17 x B73: '.0015716' Biased in favor of strain: 'B73'
GRMZM2G002999	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.68 x 10^-6	269	65	131	155	80.54%	54.20%	334	286	RefGen V2	χ2 p-value for B73 x Mo17: '7.53e-08' χ2 p-value for Mo17 x B73: '7.68e-06' Biased in favor of strain: 'B73'
GRMZM2G002993	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.637251 x 10^-1	38	16	40	39	70.37%	49.37%	54	79	RefGen V2	χ2 p-value for B73 x Mo17: '.5637251' χ2 p-value for Mo17 x B73: '.0011071' Biased in favor of strain: ''
GRMZM2G002993	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.62361 x 10^-2	90	46	66	45	66.18%	40.54%	136	111	RefGen V2	χ2 p-value for B73 x Mo17: '.0001613' χ2 p-value for Mo17 x B73: '.0462361' Biased in favor of strain: 'B73'
GRMZM2G002978	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.815113 x 10^-1	8	5	7	6	61.54%	46.15%	13	13	RefGen V2	χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: ''
GRMZM2G002978	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	2	9	4	60.00%	30.77%	5	13	RefGen V2	χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.0060396' Biased in favor of strain: ''
GRMZM2G002961	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	3	3	100.00%	50.00%	2	6	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: ''
GRMZM2G002961	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G002959	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	834	250	745	258	76.94%	25.72%	1084	1003	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G002959	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.240978 x 10^-1	905	436	474	1108	67.49%	70.04%	1341	1582	RefGen V2	χ2 p-value for B73 x Mo17: '.5240978' χ2 p-value for Mo17 x B73: '.0044485' Biased in favor of strain: ''
GRMZM2G002950	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G002950	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	3	0	100.00%	0.00%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G002921	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	8	5	8	0.00%	61.54%	8	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.4053805' Biased in favor of strain: ''
GRMZM2G002921	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	13	0.00%	100.00%	2	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.0107875' Biased in favor of strain: ''
GRMZM2G002918	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5654 x 10^-3	0	10	0	20	0.00%	100.00%	10	20	RefGen V2	χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: 'Mo17'
GRMZM2G002918	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	6	0	10	0.00%	100.00%	6	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: ''
GRMZM2G002915	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	1	100.00%	50.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G002915	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	0	2	1	100.00%	33.33%	10	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: ''
GRMZM2G002910	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.329416 x 10^-1	38	32	27	37	54.29%	57.81%	70	64	RefGen V2	χ2 p-value for B73 x Mo17: '.0279885' χ2 p-value for Mo17 x B73: '.1329416' Biased in favor of strain: ''
GRMZM2G002910	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.542552 x 10^-1	65	76	94	52	46.10%	35.62%	141	146	RefGen V2	χ2 p-value for B73 x Mo17: '.3542552' χ2 p-value for Mo17 x B73: '.0005091' Biased in favor of strain: ''
GRMZM2G002903	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.01255 x 10^-2	228	181	244	179	55.75%	42.32%	409	423	RefGen V2	χ2 p-value for B73 x Mo17: '.0201255' χ2 p-value for Mo17 x B73: '.0015755' Biased in favor of strain: 'B73'
GRMZM2G002903	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.114177 x 10^-1	243	120	141	208	66.94%	59.60%	363	349	RefGen V2	χ2 p-value for B73 x Mo17: '.9114177' χ2 p-value for Mo17 x B73: '.0050954' Biased in favor of strain: ''
GRMZM2G002898	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.3 x 10^-13	816	242	442	364	77.13%	45.16%	1058	806	RefGen V2	χ2 p-value for B73 x Mo17: '5.30e-13' χ2 p-value for Mo17 x B73: '2.30e-38' Biased in favor of strain: 'B73'
GRMZM2G002898	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.404727 x 10^-1	556	431	433	456	56.33%	51.29%	987	889	RefGen V2	χ2 p-value for B73 x Mo17: '.0000693' χ2 p-value for Mo17 x B73: '.4404727' Biased in favor of strain: ''
GRMZM2G002894	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.815113 x 10^-1	7	6	5	7	53.85%	58.33%	13	12	RefGen V2	χ2 p-value for B73 x Mo17: '.7815113' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G002894	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.159304 x 10^-1	13	3	7	4	81.25%	36.36%	16	11	RefGen V2	χ2 p-value for B73 x Mo17: '.2159304' χ2 p-value for Mo17 x B73: '.0330062' Biased in favor of strain: ''
GRMZM2G002879	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.34 x 10^-11	191	27	104	41	87.61%	28.28%	218	145	RefGen V2	χ2 p-value for B73 x Mo17: '5.34e-11' χ2 p-value for Mo17 x B73: '1.05e-22' Biased in favor of strain: 'B73'
GRMZM2G002879	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	351	78	343	73	81.82%	17.55%	429	416	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G002874	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.106354 x 10^-1	213	170	225	204	55.61%	47.55%	383	429	RefGen V2	χ2 p-value for B73 x Mo17: '.0280064' χ2 p-value for Mo17 x B73: '.3106354' Biased in favor of strain: ''
GRMZM2G002874	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.932572 x 10^-1	59	24	47	45	71.08%	48.91%	83	92	RefGen V2	χ2 p-value for B73 x Mo17: '.3932572' χ2 p-value for Mo17 x B73: '.0003035' Biased in favor of strain: ''
GRMZM2G002863	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.733281 x 10^-1	12	3	8	7	80.00%	46.67%	15	15	RefGen V2	χ2 p-value for B73 x Mo17: '.2733281' χ2 p-value for Mo17 x B73: '.1003482' Biased in favor of strain: ''
GRMZM2G002863	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.348273 x 10^-1	24	6	12	11	80.00%	47.83%	30	23	RefGen V2	χ2 p-value for B73 x Mo17: '.001015' χ2 p-value for Mo17 x B73: '.8348273' Biased in favor of strain: ''
GRMZM2G002859	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.13 x 10^-13	270	113	207	81	70.50%	28.12%	383	288	RefGen V2	χ2 p-value for B73 x Mo17: '1.04e-15' χ2 p-value for Mo17 x B73: '1.13e-13' Biased in favor of strain: 'B73'
GRMZM2G002859	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.24 x 10^-13	407	87	201	149	82.39%	42.57%	494	350	RefGen V2	χ2 p-value for B73 x Mo17: '1.24e-13' χ2 p-value for Mo17 x B73: '1.15e-21' Biased in favor of strain: 'B73'
GRMZM2G002858	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		16	6	4	5	72.73%	55.56%	22	9	RefGen V2	χ2 p-value for B73 x Mo17: '.5465071' χ2 p-value for Mo17 x B73: '.4795' Biased in favor of strain: ''
GRMZM2G002858	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.524529 x 10^-1	42	61	54	48	40.78%	47.06%	103	102	RefGen V2	χ2 p-value for B73 x Mo17: '.0611892' χ2 p-value for Mo17 x B73: '.5524529' Biased in favor of strain: ''
GRMZM2G002851	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	13	7	15	10	65.00%	40.00%	20	25	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G002851	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.434433 x 10^-1	15	6	7	27	71.43%	79.41%	21	34	RefGen V2	χ2 p-value for B73 x Mo17: '.6434433' χ2 p-value for Mo17 x B73: '.1149149' Biased in favor of strain: ''
GRMZM2G002830	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.99 x 10^-5	55	5	51	18	91.67%	26.09%	60	69	RefGen V2	χ2 p-value for B73 x Mo17: '.0000399' χ2 p-value for Mo17 x B73: '8.64e-13' Biased in favor of strain: 'B73'
GRMZM2G002830	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1604	173	1384	144	90.26%	9.42%	1777	1528	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G002828	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.949 x 10^-4	686	489	561	453	58.38%	44.67%	1175	1014	RefGen V2	χ2 p-value for B73 x Mo17: '9.08e-09' χ2 p-value for Mo17 x B73: '.0006949' Biased in favor of strain: 'B73'
GRMZM2G002828	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.42 x 10^-7	3434	1467	2004	2571	70.07%	56.20%	4901	4575	RefGen V2	χ2 p-value for B73 x Mo17: '4.42e-07' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G002825	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2345	675	1159	1355	77.65%	53.90%	3020	2514	RefGen V2	χ2 p-value for B73 x Mo17: '1.59e-37' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G002825	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.33 x 10^-19	3718	2280	3575	2849	61.99%	44.35%	5998	6424	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.33e-19' Biased in favor of strain: 'B73'
GRMZM2G002805	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.547208 x 10^-1	24	21	6	29	53.33%	82.86%	45	35	RefGen V2	χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.0001012' Biased in favor of strain: ''
GRMZM2G002805	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.1347 x 10^-3	46	4	21	17	92.00%	44.74%	50	38	RefGen V2	χ2 p-value for B73 x Mo17: '.0001447' χ2 p-value for Mo17 x B73: '.0041347' Biased in favor of strain: 'B73'
GRMZM2G002765	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.062603 x 10^-1	69	44	52	60	61.06%	53.57%	113	112	RefGen V2	χ2 p-value for B73 x Mo17: '.2062603' χ2 p-value for Mo17 x B73: '.0032835' Biased in favor of strain: ''
GRMZM2G002765	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.7 x 10^-9	143	60	135	54	70.44%	28.57%	203	189	RefGen V2	χ2 p-value for B73 x Mo17: '5.70e-09' χ2 p-value for Mo17 x B73: '3.82e-09' Biased in favor of strain: 'B73'
GRMZM2G002756	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.270892 x 10^-1	14	3	4	6	82.35%	60.00%	17	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0076329' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: ''
GRMZM2G002756	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.572519 x 10^-1	36	23	22	25	61.02%	53.19%	59	47	RefGen V2	χ2 p-value for B73 x Mo17: '.3572519' χ2 p-value for Mo17 x B73: '.0500308' Biased in favor of strain: ''

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