GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G003944	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.937686 x 10^-1	17	7	13	9	70.83%	40.91%	24	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0412268' χ2 p-value for Mo17 x B73: '.3937686' Biased in favor of strain: ''
GRMZM2G003944	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G003930	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.939373 x 10^-1	19	5	10	1	79.17%	9.09%	24	11	RefGen V2	χ2 p-value for B73 x Mo17: '.1939373' χ2 p-value for Mo17 x B73: '.000051' Biased in favor of strain: ''
GRMZM2G003930	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	20	14	11	11	58.82%	50.00%	34	22	RefGen V2	χ2 p-value for B73 x Mo17: '.3034837' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G003909	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	5.54 x 10^-11	179	0	11	70	100.00%	86.42%	179	81	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.54e-11' Biased in favor of strain: ''
GRMZM2G003909	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	maternally biased	5.41 x 10^-7	619	0	13	102	100.00%	88.70%	619	115	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.41e-07' Biased in favor of strain: ''
GRMZM2G003897	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1209	260	825	585	82.30%	41.49%	1469	1410	RefGen V2	χ2 p-value for B73 x Mo17: '5.12e-37' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003897	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1842	660	1886	784	73.62%	29.36%	2502	2670	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003883	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.722015 x 10^-1	285	138	170	157	67.38%	48.01%	423	327	RefGen V2	χ2 p-value for B73 x Mo17: '8.84e-13' χ2 p-value for Mo17 x B73: '.4722015' Biased in favor of strain: ''
GRMZM2G003883	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.64825 x 10^-2	460	276	509	850	62.50%	62.55%	736	1359	RefGen V2	χ2 p-value for B73 x Mo17: '.0164825' χ2 p-value for Mo17 x B73: '.001271' Biased in favor of strain: ''
GRMZM2G003875	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.141259 x 10^-1	182	74	94	160	71.09%	62.99%	256	254	RefGen V2	χ2 p-value for B73 x Mo17: '.13296' χ2 p-value for Mo17 x B73: '.2141259' Biased in favor of strain: ''
GRMZM2G003875	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.2123 x 10^-2	302	262	242	291	53.55%	54.60%	564	533	RefGen V2	χ2 p-value for B73 x Mo17: '.092123' χ2 p-value for Mo17 x B73: '.033802' Biased in favor of strain: ''
GRMZM2G003861	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.17 x 10^-11	543	243	527	335	69.08%	38.86%	786	862	RefGen V2	χ2 p-value for B73 x Mo17: '1.01e-26' χ2 p-value for Mo17 x B73: '6.17e-11' Biased in favor of strain: 'B73'
GRMZM2G003861	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.84389 x 10^-2	54	39	70	64	58.06%	47.76%	93	134	RefGen V2	χ2 p-value for B73 x Mo17: '.0784389' χ2 p-value for Mo17 x B73: '3.44e-06' Biased in favor of strain: ''
GRMZM2G003853	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.311267 x 10^-1	1663	737	857	1608	69.29%	65.23%	2400	2465	RefGen V2	χ2 p-value for B73 x Mo17: '.0063767' χ2 p-value for Mo17 x B73: '.1311267' Biased in favor of strain: ''
GRMZM2G003853	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.75 x 10^-23	1087	562	962	571	65.92%	37.25%	1649	1533	RefGen V2	χ2 p-value for B73 x Mo17: '3.11e-38' χ2 p-value for Mo17 x B73: '1.75e-23' Biased in favor of strain: 'B73'
GRMZM2G003821	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	3	7	71.43%	70.00%	7	10	RefGen V2	χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: ''
GRMZM2G003821	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	3	1	5	57.14%	83.33%	7	6	RefGen V2	χ2 p-value for B73 x Mo17: '.5929702' χ2 p-value for Mo17 x B73: '.3864763' Biased in favor of strain: ''
GRMZM2G003814	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.553461 x 10^-1	15	5	9	14	75.00%	60.87%	20	23	RefGen V2	χ2 p-value for B73 x Mo17: '.4292061' χ2 p-value for Mo17 x B73: '.5553461' Biased in favor of strain: ''
GRMZM2G003814	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		13	3	3	6	81.25%	66.67%	16	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0124193' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G003796	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.797755 x 10^-1	42	19	48	57	68.85%	54.29%	61	105	RefGen V2	χ2 p-value for B73 x Mo17: '.0032311' χ2 p-value for Mo17 x B73: '.3797755' Biased in favor of strain: ''
GRMZM2G003796	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.26769 x 10^-2	73	24	99	98	75.26%	49.75%	97	197	RefGen V2	χ2 p-value for B73 x Mo17: '.0726769' χ2 p-value for Mo17 x B73: '4.71e-07' Biased in favor of strain: ''
GRMZM2G003789	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.823 x 10^-4	1514	1292	497	1187	53.96%	70.49%	2806	1684	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0008823' Biased in favor of strain: 'Mo17'
GRMZM2G003789	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.68013 x 10^-2	573	439	561	644	56.62%	53.44%	1012	1205	RefGen V2	χ2 p-value for B73 x Mo17: '.0000253' χ2 p-value for Mo17 x B73: '.0168013' Biased in favor of strain: ''
GRMZM2G003784	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.8 x 10^-29	1330	813	1926	1120	62.06%	36.77%	2143	3046	RefGen V2	χ2 p-value for B73 x Mo17: '5.84e-29' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003784	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	0	50.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G003769	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.34 x 10^-7	95	11	35	7	89.62%	16.67%	106	42	RefGen V2	χ2 p-value for B73 x Mo17: '5.34e-07' χ2 p-value for Mo17 x B73: '6.25e-12' Biased in favor of strain: 'B73'
GRMZM2G003769	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		18	1	4	2	94.74%	33.33%	19	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0000962' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: ''
GRMZM2G003765	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.43 x 10^-7	547	345	497	347	61.32%	41.11%	892	844	RefGen V2	χ2 p-value for B73 x Mo17: '1.35e-11' χ2 p-value for Mo17 x B73: '2.43e-07' Biased in favor of strain: 'B73'
GRMZM2G003765	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.79241 x 10^-2	743	317	334	529	70.09%	61.30%	1060	863	RefGen V2	χ2 p-value for B73 x Mo17: '.0179241' χ2 p-value for Mo17 x B73: '.0008206' Biased in favor of strain: ''
GRMZM2G003762	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	78711	24132	38530	49206	76.54%	56.08%	102843	87736	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003762	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	12328	4358	10481	7464	73.88%	41.59%	16686	17945	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003754	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.389798 x 10^-1	70	23	39	31	75.27%	44.29%	93	70	RefGen V2	χ2 p-value for B73 x Mo17: '1.10e-06' χ2 p-value for Mo17 x B73: '.3389798' Biased in favor of strain: ''
GRMZM2G003754	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.138524 x 10^-1	35	10	34	43	77.78%	55.84%	45	77	RefGen V2	χ2 p-value for B73 x Mo17: '.1138524' χ2 p-value for Mo17 x B73: '.043951' Biased in favor of strain: ''
GRMZM2G003752	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.52 x 10^-12	240	38	253	135	86.33%	34.79%	278	388	RefGen V2	χ2 p-value for B73 x Mo17: '3.52e-12' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003752	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.153026 x 10^-1	122	40	47	52	75.31%	52.53%	162	99	RefGen V2	χ2 p-value for B73 x Mo17: '1.17e-10' χ2 p-value for Mo17 x B73: '.6153026' Biased in favor of strain: ''
GRMZM2G003750	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.85112 x 10^-1	54	75	35	47	41.86%	57.32%	129	82	RefGen V2	χ2 p-value for B73 x Mo17: '.0644655' χ2 p-value for Mo17 x B73: '.185112' Biased in favor of strain: ''
GRMZM2G003750	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.62081 x 10^-2	11	14	13	56	44.00%	81.16%	25	69	RefGen V2	χ2 p-value for B73 x Mo17: '.0162081' χ2 p-value for Mo17 x B73: '.0106564' Biased in favor of strain: ''
GRMZM2G003742	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6492 x 10^-1	17	4	13	12	80.95%	48.00%	21	25	RefGen V2	χ2 p-value for B73 x Mo17: '.16492' χ2 p-value for Mo17 x B73: '.0477148' Biased in favor of strain: ''
GRMZM2G003742	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.682351 x 10^-1	30	20	26	23	60.00%	46.94%	50	49	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.6682351' Biased in favor of strain: ''
GRMZM2G003738	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	15	10	12	6	60.00%	33.33%	25	18	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G003738	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	2	2	0.00%	50.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G003734	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.124235 x 10^-1	96	46	63	83	67.61%	56.85%	142	146	RefGen V2	χ2 p-value for B73 x Mo17: '.8124235' χ2 p-value for Mo17 x B73: '.0118565' Biased in favor of strain: ''
GRMZM2G003734	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.522416 x 10^-1	79	62	62	27	56.03%	30.34%	141	89	RefGen V2	χ2 p-value for B73 x Mo17: '.1522416' χ2 p-value for Mo17 x B73: '.0002073' Biased in favor of strain: ''
GRMZM2G003732	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.58064 x 10^-2	684	604	625	429	53.11%	40.70%	1288	1054	RefGen V2	χ2 p-value for B73 x Mo17: '.0258064' χ2 p-value for Mo17 x B73: '1.57e-09' Biased in favor of strain: 'B73'
GRMZM2G003732	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.51 x 10^-9	586	173	384	522	77.21%	57.62%	759	906	RefGen V2	χ2 p-value for B73 x Mo17: '7.28e-10' χ2 p-value for Mo17 x B73: '7.51e-09' Biased in favor of strain: 'B73'
GRMZM2G003725	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	2		66.67%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G003725	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.053805 x 10^-1	10	5	8	5	66.67%	38.46%	15	13	RefGen V2	χ2 p-value for B73 x Mo17: '.1967056' χ2 p-value for Mo17 x B73: '.4053805' Biased in favor of strain: ''
GRMZM2G003724	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.053805 x 10^-1	124	100	98	110	55.36%	52.88%	224	208	RefGen V2	χ2 p-value for B73 x Mo17: '.1088094' χ2 p-value for Mo17 x B73: '.4053805' Biased in favor of strain: ''
GRMZM2G003724	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8948 x 10^-2	168	59	129	187	74.01%	59.18%	227	316	RefGen V2	χ2 p-value for B73 x Mo17: '.018948' χ2 p-value for Mo17 x B73: '.0047394' Biased in favor of strain: ''
GRMZM2G003692	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.98496 x 10^-1	78	42	34	57	65.00%	62.64%	120	91	RefGen V2	χ2 p-value for B73 x Mo17: '.698496' χ2 p-value for Mo17 x B73: '.4148578' Biased in favor of strain: ''
GRMZM2G003692	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.266855 x 10^-1	136	89	133	114	60.44%	46.15%	225	247	RefGen V2	χ2 p-value for B73 x Mo17: '.0017283' χ2 p-value for Mo17 x B73: '.2266855' Biased in favor of strain: ''
GRMZM2G003682	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.37 x 10^-6	51	15	41	9	77.27%	18.00%	66	50	RefGen V2	χ2 p-value for B73 x Mo17: '9.37e-06' χ2 p-value for Mo17 x B73: '6.03e-06' Biased in favor of strain: 'B73'
GRMZM2G003682	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.75 x 10^-10	140	14	72	41	90.91%	36.28%	154	113	RefGen V2	χ2 p-value for B73 x Mo17: '1.75e-10' χ2 p-value for Mo17 x B73: '7.31e-12' Biased in favor of strain: 'B73'
GRMZM2G003663	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	4	3	50.00%	42.86%	4	7	RefGen V2	χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.1814491' Biased in favor of strain: ''
GRMZM2G003663	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.657123 x 10^-1	9	3	7	4	75.00%	36.36%	12	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: ''
GRMZM2G003662	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	11	11	12	4	50.00%	25.00%	22	16	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G003662	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	11	4	83.33%	26.67%	6	15	RefGen V2	χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.001015' Biased in favor of strain: ''
GRMZM2G003656	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.199863 x 10^-1	561	313	339	418	64.19%	55.22%	874	757	RefGen V2	χ2 p-value for B73 x Mo17: '.1199863' χ2 p-value for Mo17 x B73: '2.36e-11' Biased in favor of strain: ''
GRMZM2G003656	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.25933 x 10^-1	251	170	216	249	59.62%	53.55%	421	465	RefGen V2	χ2 p-value for B73 x Mo17: '.0000789' χ2 p-value for Mo17 x B73: '.125933' Biased in favor of strain: ''
GRMZM2G003642	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.588934 x 10^-1	682	745	533	580	47.79%	52.11%	1427	1113	RefGen V2	χ2 p-value for B73 x Mo17: '.0953672' χ2 p-value for Mo17 x B73: '.1588934' Biased in favor of strain: ''
GRMZM2G003642	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.2 x 10^-23	1400	401	836	969	77.73%	53.68%	1801	1805	RefGen V2	χ2 p-value for B73 x Mo17: '2.20e-23' χ2 p-value for Mo17 x B73: '1.27e-31' Biased in favor of strain: 'B73'
GRMZM2G003640	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2528	470	1402	656	84.32%	31.88%	2998	2058	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003640	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2660	1040	2208	1014	71.89%	31.47%	3700	3222	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003635	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.01995 x 10^-2	251	209	190	239	54.57%	55.71%	460	429	RefGen V2	χ2 p-value for B73 x Mo17: '.0501995' χ2 p-value for Mo17 x B73: '.017994' Biased in favor of strain: ''
GRMZM2G003635	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.24 x 10^-5	239	196	127	385	54.94%	75.20%	435	512	RefGen V2	χ2 p-value for B73 x Mo17: '2.13e-07' χ2 p-value for Mo17 x B73: '.0000424' Biased in favor of strain: 'Mo17'
GRMZM2G003631	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	0		0.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G003631	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	4	2	100.00%	33.33%	4	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: ''
GRMZM2G003607	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.346047 x 10^-1	494	335	415	373	59.59%	47.34%	829	788	RefGen V2	χ2 p-value for B73 x Mo17: '3.35e-08' χ2 p-value for Mo17 x B73: '.1346047' Biased in favor of strain: ''
GRMZM2G003607	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.674777 x 10^-1	92	35	87	111	72.44%	56.06%	127	198	RefGen V2	χ2 p-value for B73 x Mo17: '.1674777' χ2 p-value for Mo17 x B73: '.0015462' Biased in favor of strain: ''
GRMZM2G003595	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.372143 x 10^-1	119	46	99	56	72.12%	36.13%	165	155	RefGen V2	χ2 p-value for B73 x Mo17: '.1372143' χ2 p-value for Mo17 x B73: '7.32e-16' Biased in favor of strain: ''
GRMZM2G003595	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.91 x 10^-16	186	59	185	51	75.92%	21.61%	245	236	RefGen V2	χ2 p-value for B73 x Mo17: '4.91e-16' χ2 p-value for Mo17 x B73: '2.72e-18' Biased in favor of strain: 'B73'
GRMZM2G003565	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.167603 x 10^-1	176	125	151	147	58.47%	49.33%	301	298	RefGen V2	χ2 p-value for B73 x Mo17: '.0032865' χ2 p-value for Mo17 x B73: '.8167603' Biased in favor of strain: ''
GRMZM2G003565	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	1	3	0	90.00%	0.00%	10	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1175272' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G003530	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.56152 x 10^-1	15	4	25	26	78.95%	50.98%	19	51	RefGen V2	χ2 p-value for B73 x Mo17: '.256152' χ2 p-value for Mo17 x B73: '.0174847' Biased in favor of strain: ''
GRMZM2G003530	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.21928 x 10^-2	144	101	109	75	58.78%	40.76%	245	184	RefGen V2	χ2 p-value for B73 x Mo17: '.0060112' χ2 p-value for Mo17 x B73: '.0121928' Biased in favor of strain: 'B73'
GRMZM2G003526	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.327676 x 10^-1	15	11	29	16	57.69%	35.56%	26	45	RefGen V2	χ2 p-value for B73 x Mo17: '.4327676' χ2 p-value for Mo17 x B73: '.0526323' Biased in favor of strain: ''
GRMZM2G003526	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G003520	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	3	5	0.00%	62.50%	3	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.8025872' Biased in favor of strain: ''
GRMZM2G003520	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	5	5	100.00%	50.00%	4	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G003518	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	8	4	4	38.46%	50.00%	13	8	RefGen V2	χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G003518	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	2	4	100.00%	66.67%	3	6	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G003509	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.154886 x 10^-1	300	127	109	349	70.26%	76.20%	427	458	RefGen V2	χ2 p-value for B73 x Mo17: '.1154886' χ2 p-value for Mo17 x B73: '.000015' Biased in favor of strain: ''
GRMZM2G003509	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.87 x 10^-9	575	366	595	405	61.11%	40.50%	941	1000	RefGen V2	χ2 p-value for B73 x Mo17: '9.54e-12' χ2 p-value for Mo17 x B73: '1.87e-09' Biased in favor of strain: 'B73'
GRMZM2G003506	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	2	50.00%	100.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G003506	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	4	100.00%	100.00%	1	4	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G003493	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	5	1	100.00%	16.67%	4	6	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: ''
GRMZM2G003493	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.367236 x 10^-1	19	6	21	14	76.00%	40.00%	25	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0093224' χ2 p-value for Mo17 x B73: '.2367236' Biased in favor of strain: ''
GRMZM2G003489	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	5	1	1	58.33%	50.00%	12	2	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G003489	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	6	0	4	25.00%	100.00%	8	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0124186' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G003466	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	6		85.71%	0	7	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G003466	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	4	4	0.00%	50.00%	1	8	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G003426	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	2	1	0.00%	33.33%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G003426	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G003424	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.112 x 10^-4	22	0	14	0	100.00%	0.00%	22	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0009112' χ2 p-value for Mo17 x B73: '1.21e-07' Biased in favor of strain: 'B73'
GRMZM2G003424	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2177	356	2099	349	85.95%	14.26%	2533	2448	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003411	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.068274 x 10^-1	145	147	112	102	49.66%	47.66%	292	214	RefGen V2	χ2 p-value for B73 x Mo17: '.9068274' χ2 p-value for Mo17 x B73: '.4942367' Biased in favor of strain: ''
GRMZM2G003411	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.409657 x 10^-1	33	11	12	62	75.00%	83.78%	44	74	RefGen V2	χ2 p-value for B73 x Mo17: '.2409657' χ2 p-value for Mo17 x B73: '.0017867' Biased in favor of strain: ''
GRMZM2G003409	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	0	7	25.00%	100.00%	4	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.0613688' Biased in favor of strain: ''
GRMZM2G003409	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	4	50.00%	100.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''

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