GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G004519	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.54709 x 10^-1	6	4	7	7	60.00%	50.00%	10	14	RefGen V2	χ2 p-value for B73 x Mo17: '.654709' χ2 p-value for Mo17 x B73: '.1858767' Biased in favor of strain: ''
GRMZM2G004519	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	15	7	6	6	68.18%	50.00%	22	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0880815' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G004511	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.22097 x 10^-2	23	40	6	54	36.51%	90.00%	63	60	RefGen V2	χ2 p-value for B73 x Mo17: '.0322097' χ2 p-value for Mo17 x B73: '5.76e-10' Biased in favor of strain: 'Mo17'
GRMZM2G004511	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	8.151 x 10^-3	28	0	0	14	100.00%	100.00%	28	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: ''
GRMZM2G004475	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1269	162	662	273	88.68%	29.20%	1431	935	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G004475	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	896	276	1023	311	76.45%	23.31%	1172	1334	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G004468	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.6294 x 10^-3	102	39	62	36	72.34%	36.73%	141	98	RefGen V2	χ2 p-value for B73 x Mo17: '1.12e-07' χ2 p-value for Mo17 x B73: '.0086294' Biased in favor of strain: 'B73'
GRMZM2G004468	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.60204 x 10^-2	91	27	53	51	77.12%	49.04%	118	104	RefGen V2	χ2 p-value for B73 x Mo17: '.0160204' χ2 p-value for Mo17 x B73: '.000137' Biased in favor of strain: ''
GRMZM2G004459	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.41 x 10^-9	1318	486	818	987	73.06%	54.68%	1804	1805	RefGen V2	χ2 p-value for B73 x Mo17: '8.41e-09' χ2 p-value for Mo17 x B73: '3.38e-27' Biased in favor of strain: 'B73'
GRMZM2G004459	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1524	794	1345	653	65.75%	32.68%	2318	1998	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G004455	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.830513 x 10^-1	95	51	58	47	65.07%	44.76%	146	105	RefGen V2	χ2 p-value for B73 x Mo17: '.0002711' χ2 p-value for Mo17 x B73: '.2830513' Biased in favor of strain: ''
GRMZM2G004455	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.085 x 10^-4	164	42	111	141	79.61%	55.95%	206	252	RefGen V2	χ2 p-value for B73 x Mo17: '.0000811' χ2 p-value for Mo17 x B73: '.0003085' Biased in favor of strain: 'B73'
GRMZM2G004445	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.11 x 10^-6	138	120	96	337	53.49%	77.83%	258	433	RefGen V2	χ2 p-value for B73 x Mo17: '7.11e-06' χ2 p-value for Mo17 x B73: '8.34e-07' Biased in favor of strain: 'Mo17'
GRMZM2G004445	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.081796 x 10^-1	165	147	130	227	52.88%	63.59%	312	357	RefGen V2	χ2 p-value for B73 x Mo17: '.3081796' χ2 p-value for Mo17 x B73: '2.84e-07' Biased in favor of strain: ''
GRMZM2G004422	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.4186 x 10^-3	257	128	204	149	66.75%	42.21%	385	353	RefGen V2	χ2 p-value for B73 x Mo17: '4.88e-11' χ2 p-value for Mo17 x B73: '.0034186' Biased in favor of strain: 'B73'
GRMZM2G004422	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.218462 x 10^-1	506	212	211	380	70.47%	64.30%	718	591	RefGen V2	χ2 p-value for B73 x Mo17: '.0304814' χ2 p-value for Mo17 x B73: '.2218462' Biased in favor of strain: ''
GRMZM2G004414	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.6497 x 10^-3	162	51	77	97	76.06%	55.75%	213	174	RefGen V2	χ2 p-value for B73 x Mo17: '.0036497' χ2 p-value for Mo17 x B73: '.0022467' Biased in favor of strain: 'B73'
GRMZM2G004414	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	268	204	181	181	56.78%	50.00%	472	362	RefGen V2	χ2 p-value for B73 x Mo17: '.0032208' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G004412	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.911279 x 10^-1	425	429	373	459	49.77%	55.17%	854	832	RefGen V2	χ2 p-value for B73 x Mo17: '.8911279' χ2 p-value for Mo17 x B73: '.0028683' Biased in favor of strain: ''
GRMZM2G004412	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.02 x 10^-21	37	96	12	287	27.82%	95.99%	133	299	RefGen V2	χ2 p-value for B73 x Mo17: '2.02e-21' χ2 p-value for Mo17 x B73: '5.62e-27' Biased in favor of strain: 'Mo17'
GRMZM2G004397	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.152912 x 10^-1	855	468	485	1180	64.63%	70.87%	1323	1665	RefGen V2	χ2 p-value for B73 x Mo17: '.1152912' χ2 p-value for Mo17 x B73: '.0002736' Biased in favor of strain: ''
GRMZM2G004397	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.547208 x 10^-1	443	357	354	366	55.38%	50.83%	800	720	RefGen V2	χ2 p-value for B73 x Mo17: '.0023614' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G004382	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.35 x 10^-20	3827	2787	3046	2372	57.86%	43.78%	6614	5418	RefGen V2	χ2 p-value for B73 x Mo17: '1.91e-37' χ2 p-value for Mo17 x B73: '5.35e-20' Biased in favor of strain: 'B73'
GRMZM2G004382	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.94 x 10^-10	6332	2753	3742	5431	69.70%	59.21%	9085	9173	RefGen V2	χ2 p-value for B73 x Mo17: '8.94e-10' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G004377	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.864 x 10^-4	755	292	534	646	72.11%	54.75%	1047	1180	RefGen V2	χ2 p-value for B73 x Mo17: '.0001864' χ2 p-value for Mo17 x B73: '3.73e-18' Biased in favor of strain: 'B73'
GRMZM2G004377	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.42 x 10^-7	298	147	287	174	66.97%	37.74%	445	461	RefGen V2	χ2 p-value for B73 x Mo17: '8.18e-13' χ2 p-value for Mo17 x B73: '1.42e-07' Biased in favor of strain: 'B73'
GRMZM2G004362	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	1	2	50.00%	66.67%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G004362	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G004356	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.662636 x 10^-1	691	316	365	744	68.62%	67.09%	1007	1109	RefGen V2	χ2 p-value for B73 x Mo17: '.1886643' χ2 p-value for Mo17 x B73: '.7662636' Biased in favor of strain: ''
GRMZM2G004356	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.291 x 10^-4	118	71	56	131	62.43%	70.05%	189	187	RefGen V2	χ2 p-value for B73 x Mo17: '.0006291' χ2 p-value for Mo17 x B73: '4.15e-08' Biased in favor of strain: ''
GRMZM2G004352	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.082937 x 10^-1	31	9	13	6	77.50%	31.58%	40	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0005042' χ2 p-value for Mo17 x B73: '.1082937' Biased in favor of strain: ''
GRMZM2G004352	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.948869 x 10^-1	51	37	16	36	57.95%	69.23%	88	52	RefGen V2	χ2 p-value for B73 x Mo17: '.0829641' χ2 p-value for Mo17 x B73: '.6948869' Biased in favor of strain: ''
GRMZM2G004349	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.17 x 10^-23	226	7	185	73	97.00%	28.29%	233	258	RefGen V2	χ2 p-value for B73 x Mo17: '9.17e-23' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G004349	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	563	104	724	97	84.41%	11.81%	667	821	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G004334	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.73 x 10^-5	77	33	73	19	70.00%	20.65%	110	92	RefGen V2	χ2 p-value for B73 x Mo17: '.0000273' χ2 p-value for Mo17 x B73: '1.80e-08' Biased in favor of strain: 'B73'
GRMZM2G004334	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G004320	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	7	100.00%	77.78%	2	9	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.4795002' Biased in favor of strain: ''
GRMZM2G004320	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	4	8	100.00%	66.67%	3	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: ''
GRMZM2G004305	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.33 x 10^-7	98	11	46	8	89.91%	14.81%	109	54	RefGen V2	χ2 p-value for B73 x Mo17: '7.88e-17' χ2 p-value for Mo17 x B73: '2.33e-07' Biased in favor of strain: 'B73'
GRMZM2G004305	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.45 x 10^-20	180	3	99	6	98.36%	5.71%	183	105	RefGen V2	χ2 p-value for B73 x Mo17: '9.45e-20' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G004301	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.09592 x 10^-2	102	36	71	88	73.91%	55.35%	138	159	RefGen V2	χ2 p-value for B73 x Mo17: '.0709592' χ2 p-value for Mo17 x B73: '.0024604' Biased in favor of strain: ''
GRMZM2G004301	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.590767 x 10^-1	80	30	53	42	72.73%	44.21%	110	95	RefGen V2	χ2 p-value for B73 x Mo17: '1.87e-06' χ2 p-value for Mo17 x B73: '.2590767' Biased in favor of strain: ''
GRMZM2G004259	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.243817 x 10^-1	56	55	39	28	50.45%	41.79%	111	67	RefGen V2	χ2 p-value for B73 x Mo17: '.9243817' χ2 p-value for Mo17 x B73: '.1789924' Biased in favor of strain: ''
GRMZM2G004259	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.559556 x 10^-1	37	26	20	51	58.73%	71.83%	63	71	RefGen V2	χ2 p-value for B73 x Mo17: '.1814355' χ2 p-value for Mo17 x B73: '.3559556' Biased in favor of strain: ''
GRMZM2G004222	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	10	3	100.00%	23.08%	5	13	RefGen V2	χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0008561' Biased in favor of strain: ''
GRMZM2G004222	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.80815 x 10^-2	26	4	15	7	86.67%	31.82%	30	22	RefGen V2	χ2 p-value for B73 x Mo17: '.000059' χ2 p-value for Mo17 x B73: '.0880815' Biased in favor of strain: ''
GRMZM2G004188	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.46 x 10^-14	381	142	281	127	72.85%	31.13%	523	408	RefGen V2	χ2 p-value for B73 x Mo17: '1.45e-25' χ2 p-value for Mo17 x B73: '2.46e-14' Biased in favor of strain: 'B73'
GRMZM2G004188	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.74 x 10^-10	328	77	211	182	80.99%	46.31%	405	393	RefGen V2	χ2 p-value for B73 x Mo17: '9.74e-10' χ2 p-value for Mo17 x B73: '1.12e-17' Biased in favor of strain: 'B73'
GRMZM2G004183	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.65 x 10^-28	2329	708	1176	1539	76.69%	56.69%	3037	2715	RefGen V2	χ2 p-value for B73 x Mo17: '1.07e-31' χ2 p-value for Mo17 x B73: '2.65e-28' Biased in favor of strain: 'B73'
GRMZM2G004183	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1803	883	1306	697	67.13%	34.80%	2686	2003	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G004182	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.108176 x 10^-1	577	476	486	537	54.80%	52.49%	1053	1023	RefGen V2	χ2 p-value for B73 x Mo17: '.0018552' χ2 p-value for Mo17 x B73: '.1108176' Biased in favor of strain: ''
GRMZM2G004182	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.1632 x 10^-3	950	405	434	705	70.11%	61.90%	1355	1139	RefGen V2	χ2 p-value for B73 x Mo17: '.0071632' χ2 p-value for Mo17 x B73: '.0006374' Biased in favor of strain: 'B73'
GRMZM2G004180	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G004180	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.72 x 10^-7	134	61	115	45	68.72%	28.12%	195	160	RefGen V2	χ2 p-value for B73 x Mo17: '1.72e-07' χ2 p-value for Mo17 x B73: '3.13e-08' Biased in favor of strain: 'B73'
GRMZM2G004172	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.19 x 10^-11	259	55	188	80	82.48%	29.85%	314	268	RefGen V2	χ2 p-value for B73 x Mo17: '1.14e-30' χ2 p-value for Mo17 x B73: '4.19e-11' Biased in favor of strain: 'B73'
GRMZM2G004172	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.28 x 10^-5	115	23	74	43	83.33%	36.75%	138	117	RefGen V2	χ2 p-value for B73 x Mo17: '.0000328' χ2 p-value for Mo17 x B73: '6.69e-12' Biased in favor of strain: 'B73'
GRMZM2G004160	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	7	1	28	0.00%	96.55%	7	29	RefGen V2	χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0006402' Biased in favor of strain: ''
GRMZM2G004160	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	0	2	66.67%	100.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G004140	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0 x 10^-30	582	218	455	168	72.75%	26.97%	800	623	RefGen V2	χ2 p-value for B73 x Mo17: '6.70e-38' χ2 p-value for Mo17 x B73: '1.34e-30' Biased in favor of strain: 'B73'
GRMZM2G004140	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.39 x 10^-11	299	60	139	74	83.29%	34.74%	359	213	RefGen V2	χ2 p-value for B73 x Mo17: '2.39e-11' χ2 p-value for Mo17 x B73: '4.89e-23' Biased in favor of strain: 'B73'
GRMZM2G004138	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.81 x 10^-8	414	87	180	207	82.63%	53.49%	501	387	RefGen V2	χ2 p-value for B73 x Mo17: '3.41e-14' χ2 p-value for Mo17 x B73: '3.81e-08' Biased in favor of strain: 'B73'
GRMZM2G004138	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.89 x 10^-21	548	210	569	294	72.30%	34.07%	758	863	RefGen V2	χ2 p-value for B73 x Mo17: '1.21e-34' χ2 p-value for Mo17 x B73: '7.89e-21' Biased in favor of strain: 'B73'
GRMZM2G004131	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.002652 x 10^-1	302	328	270	314	47.94%	53.77%	630	584	RefGen V2	χ2 p-value for B73 x Mo17: '.3002652' χ2 p-value for Mo17 x B73: '.0686475' Biased in favor of strain: ''
GRMZM2G004131	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.680498 x 10^-1	178	94	87	256	65.44%	74.64%	272	343	RefGen V2	χ2 p-value for B73 x Mo17: '.6680498' χ2 p-value for Mo17 x B73: '.0017435' Biased in favor of strain: ''
GRMZM2G004128	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.32 x 10^-4	24	0	27	5	100.00%	15.62%	24	32	RefGen V2	χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '9.07e-10' Biased in favor of strain: 'B73'
GRMZM2G004128	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.494363 x 10^-1	63	58	55	100	52.07%	64.52%	121	155	RefGen V2	χ2 p-value for B73 x Mo17: '.6494363' χ2 p-value for Mo17 x B73: '.0003009' Biased in favor of strain: ''
GRMZM2G004111	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	691	231	939	164	74.95%	14.87%	922	1103	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G004111	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.43 x 10^-24	553	94	402	216	85.47%	34.95%	647	618	RefGen V2	χ2 p-value for B73 x Mo17: '3.43e-24' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G004110	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	7	0	13	0.00%	100.00%	7	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0107875' Biased in favor of strain: ''
GRMZM2G004110	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.54 x 10^-8	0	32	1	39	0.00%	97.50%	32	40	RefGen V2	χ2 p-value for B73 x Mo17: '1.54e-08' χ2 p-value for Mo17 x B73: '1.87e-09' Biased in favor of strain: 'Mo17'
GRMZM2G004092	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.434634 x 10^-1	856	554	609	559	60.71%	47.86%	1410	1168	RefGen V2	χ2 p-value for B73 x Mo17: '8.79e-16' χ2 p-value for Mo17 x B73: '.1434634' Biased in favor of strain: ''
GRMZM2G004092	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.96 x 10^-6	1939	805	1321	1682	70.66%	56.01%	2744	3003	RefGen V2	χ2 p-value for B73 x Mo17: '8.96e-06' χ2 p-value for Mo17 x B73: '3.06e-35' Biased in favor of strain: 'B73'
GRMZM2G004090	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G004090	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	1	50.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G004087	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	54	56	48	48	49.09%	50.00%	110	96	RefGen V2	χ2 p-value for B73 x Mo17: '.8487665' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G004087	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.86051 x 10^-2	90	27	47	42	76.92%	47.19%	117	89	RefGen V2	χ2 p-value for B73 x Mo17: '.0186051' χ2 p-value for Mo17 x B73: '.0000972' Biased in favor of strain: ''
GRMZM2G004079	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.523 x 10^-4	67	10	37	29	87.01%	43.94%	77	66	RefGen V2	χ2 p-value for B73 x Mo17: '.0001523' χ2 p-value for Mo17 x B73: '.0000898' Biased in favor of strain: 'B73'
GRMZM2G004079	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.73 x 10^-7	63	18	70	12	77.78%	14.63%	81	82	RefGen V2	χ2 p-value for B73 x Mo17: '5.73e-07' χ2 p-value for Mo17 x B73: '1.50e-10' Biased in favor of strain: 'B73'
GRMZM2G004060	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		23	7	3	0	76.67%	0.00%	30	3	RefGen V2	χ2 p-value for B73 x Mo17: '.003487' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G004060	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G004057	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	1	3	11	87.50%	78.57%	8	14	RefGen V2	χ2 p-value for B73 x Mo17: '.2113029' χ2 p-value for Mo17 x B73: '.3447043' Biased in favor of strain: ''
GRMZM2G004057	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	1	0	66.67%	0.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G004023	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.014538 x 10^-1	44	24	38	25	64.71%	39.68%	68	63	RefGen V2	χ2 p-value for B73 x Mo17: '.0152934' χ2 p-value for Mo17 x B73: '.1014538' Biased in favor of strain: ''
GRMZM2G004023	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7239 x 10^-2	69	16	43	53	81.18%	55.21%	85	96	RefGen V2	χ2 p-value for B73 x Mo17: '.0045435' χ2 p-value for Mo17 x B73: '.017239' Biased in favor of strain: ''
GRMZM2G004012	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G004012	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.126908 x 10^-1	21	8	12	9	72.41%	42.86%	29	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0157768' χ2 p-value for Mo17 x B73: '.5126908' Biased in favor of strain: ''
GRMZM2G004006	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	4	1	100.00%	20.00%	5	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G004006	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.36 x 10^-8	74	2	24	1	97.37%	4.00%	76	25	RefGen V2	χ2 p-value for B73 x Mo17: '1.36e-08' χ2 p-value for Mo17 x B73: '3.00e-11' Biased in favor of strain: 'B73'
GRMZM2G003992	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1573	362	786	747	81.29%	48.73%	1935	1533	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003992	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1726	786	1457	678	68.71%	31.76%	2512	2135	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003988	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.75111 x 10^-2	265	210	170	203	55.79%	54.42%	475	373	RefGen V2	χ2 p-value for B73 x Mo17: '.0116169' χ2 p-value for Mo17 x B73: '.0875111' Biased in favor of strain: ''
GRMZM2G003988	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.0 x 10^-29	1668	469	1025	883	78.05%	46.28%	2137	1908	RefGen V2	χ2 p-value for B73 x Mo17: '5.98e-29' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G003984	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	1	100.00%	100.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G003984	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	3	1	0	62.50%	0.00%	8	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G003979	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.53142 x 10^-2	260	180	220	183	59.09%	45.41%	440	403	RefGen V2	χ2 p-value for B73 x Mo17: '.0001368' χ2 p-value for Mo17 x B73: '.0653142' Biased in favor of strain: ''
GRMZM2G003979	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.851135 x 10^-1	383	211	202	435	64.48%	68.29%	594	637	RefGen V2	χ2 p-value for B73 x Mo17: '.2577926' χ2 p-value for Mo17 x B73: '.3851135' Biased in favor of strain: ''
GRMZM2G003970	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.96 x 10^-4	23	0	34	9	100.00%	20.93%	23	43	RefGen V2	χ2 p-value for B73 x Mo17: '.000696' χ2 p-value for Mo17 x B73: '1.99e-10' Biased in favor of strain: 'B73'
GRMZM2G003970	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	3	4	0	57.14%	0.00%	7	4	RefGen V2	χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G003963	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.01 x 10^-16	324	113	249	95	74.14%	27.62%	437	344	RefGen V2	χ2 p-value for B73 x Mo17: '5.90e-24' χ2 p-value for Mo17 x B73: '1.01e-16' Biased in favor of strain: 'B73'
GRMZM2G003963	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.39 x 10^-11	201	30	100	47	87.01%	31.97%	231	147	RefGen V2	χ2 p-value for B73 x Mo17: '5.39e-11' χ2 p-value for Mo17 x B73: '4.53e-19' Biased in favor of strain: 'B73'

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