Displaying data sets 35001 - 35100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G07340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.81243 x 10-1 97 69 83 221 58.43% 72.70% 166 304 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.957143'
Avg. expression score for this sample: '252.116'
Avg. expression score in LCM sample: '135.897'
Tissue used: 'full endosperm'
AT5G07340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.05203 x 10-1 206 177 102 78 53.79% 43.33% 383 180 TAIR8 Avg. embryo expression (dissected): '816.951'
Avg. embryo expression (LCM): '457.107'
AT5G07340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.51537 x 10-1 45 14 76.27% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.2 x 10-13 114 5 95.80% 119 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.51292 x 10-1 25 8 75.76% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 3 1 100.00% 25.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.704917'
Avg. expression score for this sample: '6.03774'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G07330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.39669 x 10-1 20 4 16 13 83.33% 44.83% 24 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.704917'
Avg. expression score for this sample: '27.2786'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G07330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 5 4 1 58.33% 20.00% 12 5 TAIR8 Avg. embryo expression (dissected): '65.332'
Avg. embryo expression (LCM): '0'
AT5G07330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.01035 x 10-1 5 5 50.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.74825 x 10-1 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07322 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07322 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G07322 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.376415'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G07322 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G07322 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07322 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07320 APC3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07320 APC3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '148.492'
Avg. expression score in LCM sample: '58.7035'
Tissue used: 'pure endosperm, no chalazal'
AT5G07320 APC3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '177.773'
Avg. expression score in LCM sample: '58.7035'
Tissue used: 'full endosperm'
AT5G07320 APC3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '284.922'
Avg. embryo expression (LCM): '125.083'
AT5G07320 APC3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07320 APC3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07315 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07315 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G07315 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G07315 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G07315 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07315 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.324575'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G07310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.18542'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G07310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.367495'
Avg. embryo expression (LCM): '0'
AT5G07310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07300 BON2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.24581 x 10-1 19 5 79.17% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07300 BON2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 4 33.33% 100.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.763104'
Avg. expression score for this sample: '32.5444'
Avg. expression score in LCM sample: '12.0082'
Tissue used: 'pure endosperm, no chalazal'
AT5G07300 BON2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.72548 x 10-1 3 3 5 5 50.00% 50.00% 6 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.763104'
Avg. expression score for this sample: '44.0198'
Avg. expression score in LCM sample: '12.0082'
Tissue used: 'full endosperm'
AT5G07300 BON2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 3 0 1 25.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '66.5121'
Avg. embryo expression (LCM): '56.0992'
AT5G07300 BON2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07300 BON2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07290 ML4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.05464 x 10-1 90 21 81.08% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07290 ML4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.57197 x 10-1 65 21 29 59 75.58% 67.05% 86 88 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057654'
Avg. expression score for this sample: '466.053'
Avg. expression score in LCM sample: '357.365'
Tissue used: 'pure endosperm, no chalazal'
AT5G07290 ML4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.3274 x 10-2 65 16 36 89 80.25% 71.20% 81 125 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057654'
Avg. expression score for this sample: '259.212'
Avg. expression score in LCM sample: '357.365'
Tissue used: 'full endosperm'
AT5G07290 ML4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.82745 x 10-1 21 14 7 6 60.00% 46.15% 35 13 TAIR8 Avg. embryo expression (dissected): '155.98'
Avg. embryo expression (LCM): '62.7803'
AT5G07290 ML4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6376 x 10-1 10 7 58.82% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07290 ML4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0448 x 10-2 62 9 87.32% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07280 EMS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.31736 x 10-1 12 7 63.16% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07280 EMS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.56074 x 10-1 245 70 125 206 77.78% 62.24% 315 331 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.577224'
Avg. expression score for this sample: '333.825'
Avg. expression score in LCM sample: '456.341'
Tissue used: 'pure endosperm, no chalazal'
AT5G07280 EMS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.89343 x 10-1 194 112 155 323 63.40% 67.57% 306 478 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.577224'
Avg. expression score for this sample: '286.887'
Avg. expression score in LCM sample: '456.341'
Tissue used: 'full endosperm'
AT5G07280 EMS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.33213 x 10-1 13 4 2 1 76.47% 33.33% 17 3 TAIR8 Avg. embryo expression (dissected): '28.8011'
Avg. embryo expression (LCM): '14.8066'
AT5G07280 EMS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.122 x 10-3 49 47 51.04% 96 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07280 EMS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.42263 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07270 XBAT33 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2 x 10-6 114 12 90.48% 126 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07270 XBAT33 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.279 x 10-2 135 63 60 183 68.18% 75.31% 198 243 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010706'
Avg. expression score for this sample: '148.664'
Avg. expression score in LCM sample: '55.0731'
Tissue used: 'pure endosperm, no chalazal'
AT5G07270 XBAT33 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.8999 x 10-2 92 42 35 128 68.66% 78.53% 134 163 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010706'
Avg. expression score for this sample: '100.551'
Avg. expression score in LCM sample: '55.0731'
Tissue used: 'full endosperm'
AT5G07270 XBAT33 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.11658 x 10-1 46 80 29 41 36.51% 58.57% 126 70 TAIR8 Avg. embryo expression (dissected): '125.433'
Avg. embryo expression (LCM): '58.9876'
AT5G07270 XBAT33 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.87435 x 10-1 48 12 80.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07270 XBAT33 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.116 x 10-3 100 15 86.96% 115 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.91071 x 10-1 2 10 2 17 16.67% 89.47% 12 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.540151'
Avg. expression score for this sample: '1434.79'
Avg. expression score in LCM sample: '267.37'
Tissue used: 'pure endosperm, no chalazal'
AT5G07260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.71911 x 10-1 18 12 12 19 60.00% 61.29% 30 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.540151'
Avg. expression score for this sample: '1180.25'
Avg. expression score in LCM sample: '267.37'
Tissue used: 'full endosperm'
AT5G07260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '32.6666'
Avg. embryo expression (LCM): '0'
AT5G07260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.35641 x 10-1 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07250 RBL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07250 RBL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '112.066'
Avg. expression score in LCM sample: '33.6141'
Tissue used: 'pure endosperm, no chalazal'
AT5G07250 RBL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '169.365'
Avg. expression score in LCM sample: '33.6141'
Tissue used: 'full endosperm'
AT5G07250 RBL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '11.595'
Avg. embryo expression (LCM): '0'
AT5G07250 RBL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07250 RBL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07240 IQD24 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07240 IQD24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.1242'
Avg. expression score in LCM sample: '1.89603'
Tissue used: 'pure endosperm, no chalazal'
AT5G07240 IQD24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '47.7635'
Avg. expression score in LCM sample: '1.89603'
Tissue used: 'full endosperm'
AT5G07240 IQD24 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '74.1641'
Avg. embryo expression (LCM): '33.2174'
AT5G07240 IQD24 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07240 IQD24 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G07230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.70008'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G07230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G07230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07225 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07225 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.366306'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G07225 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.258468'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G07225 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G07225 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07225 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07220 BAG3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-10 491 0 100.00% 491 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07220 BAG3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.9 x 10-8 139 14 13 58 90.85% 81.69% 153 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '113.799'
Avg. expression score in LCM sample: '34.6136'
Tissue used: 'pure endosperm, no chalazal'
AT5G07220 BAG3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 278 6 12 244 97.89% 95.31% 284 256 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '343.042'
Avg. expression score in LCM sample: '34.6136'
Tissue used: 'full endosperm'
AT5G07220 BAG3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.533 x 10-3 9 1 0 12 90.00% 100.00% 10 12 TAIR8 Avg. embryo expression (dissected): '18.1776'
Avg. embryo expression (LCM): '1.74564'
AT5G07220 BAG3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.264 x 10-3 162 1 99.39% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07220 BAG3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-7 328 0 100.00% 328 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07210 RR21 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.7 x 10-17 173 98 63.84% 271 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07210 RR21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.8 x 10-6 39 18 88 36 68.42% 29.03% 57 124 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-35'
Avg. expression score for this sample: '246.986'
Avg. expression score in LCM sample: '341.918'
Tissue used: 'pure endosperm, no chalazal'
AT5G07210 RR21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 x 10-30 108 35 340 69 75.52% 16.87% 143 409 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-35'
Avg. expression score for this sample: '297.198'
Avg. expression score in LCM sample: '341.918'
Tissue used: 'full endosperm'
AT5G07210 RR21 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 4 0 1 1 100.00% 50.00% 4 2 TAIR8 Avg. embryo expression (dissected): '15.486'
Avg. embryo expression (LCM): '0'
AT5G07210 RR21 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.124 x 10-3 12 4 75.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G07210 RR21 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.8 x 10-13 368 318 53.64% 686 TAIR8 Mutant effect: 'N/A (not a MEG)'