GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G006661	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.390348 x 10^-1	330	134	118	216	71.12%	64.67%	464	334	RefGen V2	χ2 p-value for B73 x Mo17: '.0418353' χ2 p-value for Mo17 x B73: '.4390348' Biased in favor of strain: ''
GRMZM2G006661	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.3555 x 10^-3	308	237	296	178	56.51%	37.55%	545	474	RefGen V2	χ2 p-value for B73 x Mo17: '.0023555' χ2 p-value for Mo17 x B73: '5.96e-08' Biased in favor of strain: 'B73'
GRMZM2G006565	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.6556 x 10^-3	11	0	10	1	100.00%	9.09%	11	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.0066556' Biased in favor of strain: 'B73'
GRMZM2G006565	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G006526	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.719654 x 10^-1	75	31	42	102	70.75%	70.83%	106	144	RefGen V2	χ2 p-value for B73 x Mo17: '.3719654' χ2 p-value for Mo17 x B73: '.2888446' Biased in favor of strain: ''
GRMZM2G006526	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.9192 x 10^-3	154	94	93	61	62.10%	39.61%	248	154	RefGen V2	χ2 p-value for B73 x Mo17: '.000139' χ2 p-value for Mo17 x B73: '.0099192' Biased in favor of strain: 'B73'
GRMZM2G006493	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.44127 x 10^-1	34	22	11	19	60.71%	63.33%	56	30	RefGen V2	χ2 p-value for B73 x Mo17: '.1088094' χ2 p-value for Mo17 x B73: '.144127' Biased in favor of strain: ''
GRMZM2G006493	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	1	5	66.67%	83.33%	3	6	RefGen V2	χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.3864763' Biased in favor of strain: ''
GRMZM2G006477	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4895	1473	2454	2719	76.87%	52.56%	6368	5173	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G006477	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.65 x 10^-26	1525	803	1171	709	65.51%	37.71%	2328	1880	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.65e-26' Biased in favor of strain: 'B73'
GRMZM2G006453	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.73 x 10^-7	25	0	26	0	100.00%	0.00%	25	26	RefGen V2	χ2 p-value for B73 x Mo17: '5.73e-07' χ2 p-value for Mo17 x B73: '3.41e-07' Biased in favor of strain: 'B73'
GRMZM2G006453	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G006452	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.7406 x 10^-3	29	4	21	10	87.88%	32.26%	33	31	RefGen V2	χ2 p-value for B73 x Mo17: '.0097406' χ2 p-value for Mo17 x B73: '.0000482' Biased in favor of strain: 'B73'
GRMZM2G006452	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.11 x 10^-6	90	39	87	25	69.77%	22.32%	129	112	RefGen V2	χ2 p-value for B73 x Mo17: '7.11e-06' χ2 p-value for Mo17 x B73: '4.67e-09' Biased in favor of strain: 'B73'
GRMZM2G006428	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.316146 x 10^-1	10	13	10	3	43.48%	23.08%	23	13	RefGen V2	χ2 p-value for B73 x Mo17: '.5316146' χ2 p-value for Mo17 x B73: '.0522036' Biased in favor of strain: ''
GRMZM2G006428	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	7	0	50.00%	0.00%	2	7	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: ''
GRMZM2G006424	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	2	100.00%	50.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G006424	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	4	0	18	33.33%	100.00%	6	18	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: ''
GRMZM2G006399	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.55 x 10^-6	116	42	105	47	73.42%	30.92%	158	152	RefGen V2	χ2 p-value for B73 x Mo17: '3.93e-09' χ2 p-value for Mo17 x B73: '2.55e-06' Biased in favor of strain: 'B73'
GRMZM2G006399	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.50134 x 10^-1	38	18	18	14	67.86%	43.75%	56	32	RefGen V2	χ2 p-value for B73 x Mo17: '.850134' χ2 p-value for Mo17 x B73: '.0059595' Biased in favor of strain: ''
GRMZM2G006377	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.34072 x 10^-1	25	14	34	30	64.10%	46.88%	39	64	RefGen V2	χ2 p-value for B73 x Mo17: '.734072' χ2 p-value for Mo17 x B73: '.0007829' Biased in favor of strain: ''
GRMZM2G006377	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.912971 x 10^-1	63	26	41	35	70.79%	46.05%	89	76	RefGen V2	χ2 p-value for B73 x Mo17: '.0000878' χ2 p-value for Mo17 x B73: '.4912971' Biased in favor of strain: ''
GRMZM2G006370	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.48 x 10^-19	407	186	427	203	68.63%	32.22%	593	630	RefGen V2	χ2 p-value for B73 x Mo17: '1.13e-19' χ2 p-value for Mo17 x B73: '4.48e-19' Biased in favor of strain: 'B73'
GRMZM2G006370	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.37 x 10^-12	362	60	173	165	85.78%	48.82%	422	338	RefGen V2	χ2 p-value for B73 x Mo17: '8.09e-17' χ2 p-value for Mo17 x B73: '3.37e-12' Biased in favor of strain: 'B73'
GRMZM2G006325	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.60196 x 10^-1	24	9	20	10	72.73%	33.33%	33	30	RefGen V2	χ2 p-value for B73 x Mo17: '.460196' χ2 p-value for Mo17 x B73: '.0001075' Biased in favor of strain: ''
GRMZM2G006325	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.71 x 10^-10	108	31	110	35	77.70%	24.14%	139	145	RefGen V2	χ2 p-value for B73 x Mo17: '6.53e-11' χ2 p-value for Mo17 x B73: '4.71e-10' Biased in favor of strain: 'B73'
GRMZM2G006297	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.737349 x 10^-1	97	85	97	79	53.30%	44.89%	182	176	RefGen V2	χ2 p-value for B73 x Mo17: '.3737349' χ2 p-value for Mo17 x B73: '.1748444' Biased in favor of strain: ''
GRMZM2G006297	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.124226 x 10^-1	49	17	29	63	74.24%	68.48%	66	92	RefGen V2	χ2 p-value for B73 x Mo17: '.1917062' χ2 p-value for Mo17 x B73: '.7124226' Biased in favor of strain: ''
GRMZM2G006293	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.45 x 10^-16	1295	1036	649	1868	55.56%	74.22%	2331	2517	RefGen V2	χ2 p-value for B73 x Mo17: '5.26e-30' χ2 p-value for Mo17 x B73: '9.45e-16' Biased in favor of strain: 'Mo17'
GRMZM2G006293	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3160	1315	2602	1078	70.61%	29.29%	4475	3680	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G006277	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.045588 x 10^-1	63	43	59	46	59.43%	43.81%	106	105	RefGen V2	χ2 p-value for B73 x Mo17: '.0520679' χ2 p-value for Mo17 x B73: '.2045588' Biased in favor of strain: ''
GRMZM2G006277	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.726 x 10^-4	142	35	53	53	80.23%	50.00%	177	106	RefGen V2	χ2 p-value for B73 x Mo17: '.0001299' χ2 p-value for Mo17 x B73: '.0002726' Biased in favor of strain: 'B73'
GRMZM2G006252	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.92868 x 10^-1	20	9	20	27	68.97%	57.45%	29	47	RefGen V2	χ2 p-value for B73 x Mo17: '.792868' χ2 p-value for Mo17 x B73: '.1799698' Biased in favor of strain: ''
GRMZM2G006252	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.30014 x 10^-2	245	204	264	186	54.57%	41.33%	449	450	RefGen V2	χ2 p-value for B73 x Mo17: '.0530014' χ2 p-value for Mo17 x B73: '.000236' Biased in favor of strain: ''
GRMZM2G006234	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.87 x 10^-9	205	71	228	119	74.28%	34.29%	276	347	RefGen V2	χ2 p-value for B73 x Mo17: '7.27e-16' χ2 p-value for Mo17 x B73: '4.87e-09' Biased in favor of strain: 'B73'
GRMZM2G006234	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.63862 x 10^-1	46	22	20	79	67.65%	79.80%	68	99	RefGen V2	χ2 p-value for B73 x Mo17: '.863862' χ2 p-value for Mo17 x B73: '.005578' Biased in favor of strain: ''
GRMZM2G006229	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.935177 x 10^-1	36	37	31	55	49.32%	63.95%	73	86	RefGen V2	χ2 p-value for B73 x Mo17: '.0016611' χ2 p-value for Mo17 x B73: '.5935177' Biased in favor of strain: ''
GRMZM2G006229	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.351434 x 10^-1	30	35	13	20	46.15%	60.61%	65	33	RefGen V2	χ2 p-value for B73 x Mo17: '.5351434' χ2 p-value for Mo17 x B73: '.2230175' Biased in favor of strain: ''
GRMZM2G006219	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.4468 x 10^-3	327	255	339	267	56.19%	44.06%	582	606	RefGen V2	χ2 p-value for B73 x Mo17: '.0028405' χ2 p-value for Mo17 x B73: '.0034468' Biased in favor of strain: 'B73'
GRMZM2G006219	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.85 x 10^-23	1420	391	581	667	78.41%	53.45%	1811	1248	RefGen V2	χ2 p-value for B73 x Mo17: '2.95e-26' χ2 p-value for Mo17 x B73: '3.85e-23' Biased in favor of strain: 'B73'
GRMZM2G006216	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.913014 x 10^-1	17	5	21	9	77.27%	30.00%	22	30	RefGen V2	χ2 p-value for B73 x Mo17: '.2913014' χ2 p-value for Mo17 x B73: '.0000204' Biased in favor of strain: ''
GRMZM2G006216	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.68925 x 10^-1	51	73	44	55	41.13%	55.56%	124	99	RefGen V2	χ2 p-value for B73 x Mo17: '.0481935' χ2 p-value for Mo17 x B73: '.268925' Biased in favor of strain: ''
GRMZM2G006197	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G006197	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G006178	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.005766 x 10^-1	215	97	157	175	68.91%	52.71%	312	332	RefGen V2	χ2 p-value for B73 x Mo17: '.4005766' χ2 p-value for Mo17 x B73: '6.88e-08' Biased in favor of strain: ''
GRMZM2G006178	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.59 x 10^-5	172	42	90	43	80.37%	32.33%	214	133	RefGen V2	χ2 p-value for B73 x Mo17: '6.30e-19' χ2 p-value for Mo17 x B73: '.0000459' Biased in favor of strain: 'B73'
GRMZM2G006130	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	230	230	192	202	50.00%	51.27%	460	394	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.6144071' Biased in favor of strain: ''
GRMZM2G006130	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.9458 x 10^-3	44	56	24	96	44.00%	80.00%	100	120	RefGen V2	χ2 p-value for B73 x Mo17: '1.52e-06' χ2 p-value for Mo17 x B73: '.0019458' Biased in favor of strain: 'Mo17'
GRMZM2G006119	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.21913 x 10^-1	35	17	0	12	67.31%	100.00%	52	12	RefGen V2	χ2 p-value for B73 x Mo17: '.921913' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G006119	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.73 x 10^-28	1434	901	1916	1144	61.41%	37.39%	2335	3060	RefGen V2	χ2 p-value for B73 x Mo17: '2.73e-28' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G006117	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	886	277	788	267	76.18%	25.31%	1163	1055	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G006117	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.43 x 10^-18	554	117	360	322	82.56%	47.21%	671	682	RefGen V2	χ2 p-value for B73 x Mo17: '2.43e-18' χ2 p-value for Mo17 x B73: '4.45e-27' Biased in favor of strain: 'B73'
GRMZM2G006085	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.132195 x 10^-1	803	377	415	763	68.05%	64.77%	1180	1178	RefGen V2	χ2 p-value for B73 x Mo17: '.3132195' χ2 p-value for Mo17 x B73: '.1674804' Biased in favor of strain: ''
GRMZM2G006085	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.7813 x 10^-3	967	727	851	732	57.08%	46.24%	1694	1583	RefGen V2	χ2 p-value for B73 x Mo17: '5.50e-09' χ2 p-value for Mo17 x B73: '.0027813' Biased in favor of strain: 'B73'
GRMZM2G006083	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.04 x 10^-24	847	428	828	463	66.43%	35.86%	1275	1291	RefGen V2	χ2 p-value for B73 x Mo17: '8.50e-32' χ2 p-value for Mo17 x B73: '3.04e-24' Biased in favor of strain: 'B73'
GRMZM2G006083	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1517	377	818	895	80.10%	52.25%	1894	1713	RefGen V2	χ2 p-value for B73 x Mo17: '2.72e-35' χ2 p-value for Mo17 x B73: '9.88e-37' Biased in favor of strain: 'B73'
GRMZM2G006071	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.170748 x 10^-1	35	23	26	46	60.34%	63.89%	58	72	RefGen V2	χ2 p-value for B73 x Mo17: '.3070821' χ2 p-value for Mo17 x B73: '.6170748' Biased in favor of strain: ''
GRMZM2G006071	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.131161 x 10^-1	163	197	167	169	45.28%	50.30%	360	336	RefGen V2	χ2 p-value for B73 x Mo17: '.0731398' χ2 p-value for Mo17 x B73: '.9131161' Biased in favor of strain: ''
GRMZM2G006069	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.06496 x 10^-2	615	351	402	343	63.66%	46.04%	966	745	RefGen V2	χ2 p-value for B73 x Mo17: '2.00e-17' χ2 p-value for Mo17 x B73: '.0306496' Biased in favor of strain: 'B73'
GRMZM2G006069	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.675568 x 10^-1	468	291	296	585	61.66%	66.40%	759	881	RefGen V2	χ2 p-value for B73 x Mo17: '.0034324' χ2 p-value for Mo17 x B73: '.8675568' Biased in favor of strain: ''
GRMZM2G006047	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G006047	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	2	10	83.33%	83.33%	6	12	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.0209213' Biased in favor of strain: ''
GRMZM2G006042	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1099	470	1147	398	70.04%	25.76%	1569	1545	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G006042	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.21 x 10^-22	737	161	305	202	82.07%	39.84%	898	507	RefGen V2	χ2 p-value for B73 x Mo17: '1.21e-22' χ2 p-value for Mo17 x B73: '1.39e-37' Biased in favor of strain: 'B73'
GRMZM2G006006	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	4	1	2	66.67%	66.67%	12	3	RefGen V2	χ2 p-value for B73 x Mo17: '.999984' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G006006	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	8	9	9	9	47.06%	50.00%	17	18	RefGen V2	χ2 p-value for B73 x Mo17: '.8083652' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G005998	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.154 x 10^-4	44	11	22	4	80.00%	15.38%	55	26	RefGen V2	χ2 p-value for B73 x Mo17: '8.60e-06' χ2 p-value for Mo17 x B73: '.0004154' Biased in favor of strain: 'B73'
GRMZM2G005998	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.610071 x 10^-1	17	6	12	3	73.91%	20.00%	23	15	RefGen V2	χ2 p-value for B73 x Mo17: '.4610071' χ2 p-value for Mo17 x B73: '.000126' Biased in favor of strain: ''
GRMZM2G005996	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.729 x 10^-3	513	345	456	1086	59.79%	70.43%	858	1542	RefGen V2	χ2 p-value for B73 x Mo17: '.0000193' χ2 p-value for Mo17 x B73: '.001729' Biased in favor of strain: 'Mo17'
GRMZM2G005996	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.38 x 10^-13	1800	1066	1063	751	62.81%	41.40%	2866	1814	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.38e-13' Biased in favor of strain: 'B73'
GRMZM2G005990	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.31 x 10^-22	421	156	355	140	72.96%	28.28%	577	495	RefGen V2	χ2 p-value for B73 x Mo17: '2.68e-28' χ2 p-value for Mo17 x B73: '4.31e-22' Biased in favor of strain: 'B73'
GRMZM2G005990	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.14 x 10^-11	454	115	277	273	79.79%	49.64%	569	550	RefGen V2	χ2 p-value for B73 x Mo17: '3.14e-11' χ2 p-value for Mo17 x B73: '2.40e-17' Biased in favor of strain: 'B73'
GRMZM2G005980	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	1	4	100.00%	80.00%	2	5	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: ''
GRMZM2G005980	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	2	4	5	80.00%	55.56%	10	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0577796' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: ''
GRMZM2G005973	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.370853 x 10^-1	322	320	280	375	50.16%	57.25%	642	655	RefGen V2	χ2 p-value for B73 x Mo17: '.9370853' χ2 p-value for Mo17 x B73: '.0002057' Biased in favor of strain: ''
GRMZM2G005973	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.08 x 10^-20	993	876	566	1764	53.13%	75.71%	1869	2330	RefGen V2	χ2 p-value for B73 x Mo17: '2.18e-35' χ2 p-value for Mo17 x B73: '2.08e-20' Biased in favor of strain: 'Mo17'
GRMZM2G005947	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.08 x 10^-12	344	73	231	71	82.49%	23.51%	417	302	RefGen V2	χ2 p-value for B73 x Mo17: '7.08e-12' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G005947	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.33 x 10^-16	243	55	148	37	81.54%	20.00%	298	185	RefGen V2	χ2 p-value for B73 x Mo17: '1.28e-27' χ2 p-value for Mo17 x B73: '3.33e-16' Biased in favor of strain: 'B73'
GRMZM2G005939	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.6032 x 10^-3	194	123	193	144	61.20%	42.73%	317	337	RefGen V2	χ2 p-value for B73 x Mo17: '.0000667' χ2 p-value for Mo17 x B73: '.0076032' Biased in favor of strain: 'B73'
GRMZM2G005939	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.29 x 10^-25	920	215	629	516	81.06%	45.07%	1135	1145	RefGen V2	χ2 p-value for B73 x Mo17: '8.29e-25' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G005938	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.230044 x 10^-1	165	85	46	133	66.00%	74.30%	250	179	RefGen V2	χ2 p-value for B73 x Mo17: '.8230044' χ2 p-value for Mo17 x B73: '.0302412' Biased in favor of strain: ''
GRMZM2G005938	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.080725 x 10^-1	38	37	31	34	50.67%	52.31%	75	65	RefGen V2	χ2 p-value for B73 x Mo17: '.9080725' χ2 p-value for Mo17 x B73: '.7098153' Biased in favor of strain: ''
GRMZM2G005909	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	207	229	215	215	47.48%	50.00%	436	430	RefGen V2	χ2 p-value for B73 x Mo17: '.292062' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G005909	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.746479 x 10^-1	95	44	25	78	68.35%	75.73%	139	103	RefGen V2	χ2 p-value for B73 x Mo17: '.6746479' χ2 p-value for Mo17 x B73: '.0510747' Biased in favor of strain: ''
GRMZM2G005887	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.1589 x 10^-3	586	231	441	521	71.73%	54.16%	817	962	RefGen V2	χ2 p-value for B73 x Mo17: '.0021589' χ2 p-value for Mo17 x B73: '1.87e-16' Biased in favor of strain: 'B73'
GRMZM2G005887	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0657 x 10^-3	724	854	925	1177	45.88%	55.99%	1578	2102	RefGen V2	χ2 p-value for B73 x Mo17: '.0010657' χ2 p-value for Mo17 x B73: '3.87e-08' Biased in favor of strain: 'Mo17'
GRMZM2G005869	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.47 x 10^-10	85	8	76	17	91.40%	18.28%	93	93	RefGen V2	χ2 p-value for B73 x Mo17: '1.41e-15' χ2 p-value for Mo17 x B73: '9.47e-10' Biased in favor of strain: 'B73'
GRMZM2G005869	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5915 x 10^-3	51	9	36	26	85.00%	41.94%	60	62	RefGen V2	χ2 p-value for B73 x Mo17: '.0025915' χ2 p-value for Mo17 x B73: '.0000361' Biased in favor of strain: 'B73'
GRMZM2G005859	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.603484 x 10^-1	728	393	344	655	64.94%	65.57%	1121	999	RefGen V2	χ2 p-value for B73 x Mo17: '.2205414' χ2 p-value for Mo17 x B73: '.4603484' Biased in favor of strain: ''
GRMZM2G005859	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.68 x 10^-6	214	330	108	184	39.34%	63.01%	544	292	RefGen V2	χ2 p-value for B73 x Mo17: '6.58e-07' χ2 p-value for Mo17 x B73: '8.68e-06' Biased in favor of strain: 'Mo17'
GRMZM2G005849	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.906 x 10^-4	254	185	252	178	57.86%	41.40%	439	430	RefGen V2	χ2 p-value for B73 x Mo17: '.0009906' χ2 p-value for Mo17 x B73: '.0003589' Biased in favor of strain: 'B73'
GRMZM2G005849	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	6	2	50.00%	25.00%	4	8	RefGen V2	χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: ''
GRMZM2G005848	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.11816 x 10^-2	319	234	167	421	57.69%	71.60%	553	588	RefGen V2	χ2 p-value for B73 x Mo17: '7.45e-06' χ2 p-value for Mo17 x B73: '.0111816' Biased in favor of strain: ''
GRMZM2G005848	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.927167 x 10^-1	288	254	280	264	53.14%	48.53%	542	544	RefGen V2	χ2 p-value for B73 x Mo17: '.1441733' χ2 p-value for Mo17 x B73: '.4927167' Biased in favor of strain: ''
GRMZM2G005844	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.929801 x 10^-1	306	196	180	170	60.96%	48.57%	502	350	RefGen V2	χ2 p-value for B73 x Mo17: '9.13e-07' χ2 p-value for Mo17 x B73: '.5929801' Biased in favor of strain: ''
GRMZM2G005844	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.231843 x 10^-1	158	151	98	173	51.13%	63.84%	309	271	RefGen V2	χ2 p-value for B73 x Mo17: '6.93e-09' χ2 p-value for Mo17 x B73: '.3231843' Biased in favor of strain: ''
GRMZM2G005840	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.36034 x 10^-2	89	29	41	38	75.42%	48.10%	118	79	RefGen V2	χ2 p-value for B73 x Mo17: '.0436034' χ2 p-value for Mo17 x B73: '.0004645' Biased in favor of strain: ''
GRMZM2G005840	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.97 x 10^-8	210	108	203	107	66.04%	34.52%	318	310	RefGen V2	χ2 p-value for B73 x Mo17: '1.07e-08' χ2 p-value for Mo17 x B73: '4.97e-08' Biased in favor of strain: 'B73'
GRMZM2G005815	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.222495 x 10^-1	36	41	49	54	46.75%	52.43%	77	103	RefGen V2	χ2 p-value for B73 x Mo17: '.5688114' χ2 p-value for Mo17 x B73: '.6222495' Biased in favor of strain: ''
GRMZM2G005815	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	1	3	83.33%	75.00%	6	4	RefGen V2	χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: ''

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