| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G007277 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G007277 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 2 | 0.00% | 100.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G007276 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.29648 x 10-2 | 531 | 380 | 329 | 283 | 58.29% | 46.24% | 911 | 612 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.65e-07' χ2 p-value for Mo17 x B73: '.0629648' Biased in favor of strain: '' |
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| GRMZM2G007276 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.125716 x 10-1 | 1380 | 843 | 550 | 1043 | 62.08% | 65.47% | 2223 | 1593 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.44e-06' χ2 p-value for Mo17 x B73: '.3125716' Biased in favor of strain: '' |
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| GRMZM2G007258 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.313634 x 10-1 | 51 | 34 | 49 | 90 | 60.00% | 64.75% | 85 | 139 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1922716' χ2 p-value for Mo17 x B73: '.6313634' Biased in favor of strain: '' |
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| GRMZM2G007258 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.97 x 10-7 | 160 | 71 | 124 | 58 | 69.26% | 31.87% | 231 | 182 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.75e-09' χ2 p-value for Mo17 x B73: '9.97e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G007249 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.94 x 10-5 | 22 | 59 | 34 | 83 | 27.16% | 70.94% | 81 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000394' χ2 p-value for Mo17 x B73: '5.90e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G007249 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 7 | 100.00% | 0 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G007248 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 7 | 1 | 50.00% | 12.50% | 6 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.001154' Biased in favor of strain: '' |
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| GRMZM2G007248 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 6 | 2 | 4 | 64.71% | 66.67% | 17 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2252529' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G007206 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.91 x 10-24 | 460 | 176 | 526 | 244 | 72.33% | 31.69% | 636 | 770 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.04e-29' χ2 p-value for Mo17 x B73: '2.91e-24' Biased in favor of strain: 'B73' |
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| GRMZM2G007206 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1035 | 84 | 605 | 284 | 92.49% | 31.95% | 1119 | 889 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G007195 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.362885 x 10-1 | 51 | 33 | 40 | 66 | 60.71% | 62.26% | 84 | 106 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2471407' χ2 p-value for Mo17 x B73: '.3362885' Biased in favor of strain: '' |
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| GRMZM2G007195 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.15369 x 10-2 | 459 | 406 | 462 | 374 | 53.06% | 44.74% | 865 | 836 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0715369' χ2 p-value for Mo17 x B73: '.0023381' Biased in favor of strain: '' |
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| GRMZM2G007190 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.718002 x 10-1 | 76 | 42 | 52 | 55 | 64.41% | 51.40% | 118 | 107 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017483' χ2 p-value for Mo17 x B73: '.7718002' Biased in favor of strain: '' |
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| GRMZM2G007190 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.874246 x 10-1 | 53 | 31 | 24 | 66 | 63.10% | 73.33% | 84 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4874246' χ2 p-value for Mo17 x B73: '.1797126' Biased in favor of strain: '' |
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| GRMZM2G007188 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.079166 x 10-1 | 19 | 24 | 27 | 46 | 44.19% | 63.01% | 43 | 73 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017648' χ2 p-value for Mo17 x B73: '.5079166' Biased in favor of strain: '' |
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| GRMZM2G007188 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.912971 x 10-1 | 35 | 41 | 27 | 51 | 46.05% | 65.38% | 76 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4912971' χ2 p-value for Mo17 x B73: '.0065784' Biased in favor of strain: '' |
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| GRMZM2G007160 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.06 x 10-8 | 598 | 329 | 455 | 298 | 64.51% | 39.58% | 927 | 753 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.00e-18' χ2 p-value for Mo17 x B73: '1.06e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G007160 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1725 x 10-3 | 328 | 107 | 155 | 221 | 75.40% | 58.78% | 435 | 376 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001111' χ2 p-value for Mo17 x B73: '.0011725' Biased in favor of strain: 'B73' |
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| GRMZM2G007157 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.79 x 10-6 | 61 | 69 | 16 | 118 | 46.92% | 88.06% | 130 | 134 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.79e-06' χ2 p-value for Mo17 x B73: '1.49e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G007157 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.21 x 10-10 | 93 | 202 | 66 | 175 | 31.53% | 72.61% | 295 | 241 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.21e-10' χ2 p-value for Mo17 x B73: '2.20e-12' Biased in favor of strain: 'Mo17' |
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| GRMZM2G007151 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G007151 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 8 | 100.00% | 88.89% | 1 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G007137 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.3748 x 10-3 | 8 | 37 | 9 | 45 | 17.78% | 83.33% | 45 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.47e-12' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: 'Mo17' |
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| GRMZM2G007137 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 5 | 1 | 7 | 37.50% | 87.50% | 8 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: '' |
|||||
| GRMZM2G007134 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173105 x 10-1 | 14 | 1 | 10 | 6 | 93.33% | 37.50% | 15 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007891' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
||||
| GRMZM2G007134 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.37 x 10-8 | 57 | 0 | 15 | 0 | 100.00% | 0.00% | 57 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.37e-08' χ2 p-value for Mo17 x B73: '4.32e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G007130 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 2 | 2 | 4 | 80.00% | 66.67% | 10 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3710998' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G007130 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6998 x 10-3 | 14 | 2 | 21 | 1 | 87.50% | 4.55% | 16 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0000201' Biased in favor of strain: 'B73' |
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| GRMZM2G007120 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.293489 x 10-1 | 171 | 58 | 110 | 96 | 74.67% | 46.60% | 229 | 206 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.19e-14' χ2 p-value for Mo17 x B73: '.3293489' Biased in favor of strain: '' |
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| GRMZM2G007120 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.16 x 10-12 | 841 | 256 | 450 | 552 | 76.66% | 55.09% | 1097 | 1002 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.16e-12' χ2 p-value for Mo17 x B73: '7.62e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G007103 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.979441 x 10-1 | 349 | 161 | 194 | 317 | 68.43% | 62.04% | 510 | 511 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3979441' χ2 p-value for Mo17 x B73: '.0263563' Biased in favor of strain: '' |
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| GRMZM2G007103 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.50013 x 10-1 | 281 | 215 | 230 | 243 | 56.65% | 51.37% | 496 | 473 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0030417' χ2 p-value for Mo17 x B73: '.550013' Biased in favor of strain: '' |
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| GRMZM2G007080 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 24 | 11 | 9 | 9 | 68.57% | 50.00% | 35 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0279918' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G007080 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.68567 x 10-2 | 42 | 8 | 22 | 23 | 84.00% | 51.11% | 50 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0093231' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: '' |
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| GRMZM2G007063 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.568 x 10-4 | 400 | 138 | 284 | 348 | 74.35% | 55.06% | 538 | 632 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001568' χ2 p-value for Mo17 x B73: '6.09e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G007063 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.86 x 10-23 | 709 | 321 | 703 | 379 | 68.83% | 35.03% | 1030 | 1082 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.20e-33' χ2 p-value for Mo17 x B73: '6.86e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G007060 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.230175 x 10-1 | 28 | 17 | 20 | 13 | 62.22% | 39.39% | 45 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1010503' χ2 p-value for Mo17 x B73: '.2230175' Biased in favor of strain: '' |
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| GRMZM2G007060 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.213278 x 10-1 | 16 | 14 | 25 | 22 | 53.33% | 46.81% | 30 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1213278' χ2 p-value for Mo17 x B73: '.0038772' Biased in favor of strain: '' |
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| GRMZM2G007057 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.185679 x 10-1 | 26 | 12 | 38 | 35 | 68.42% | 47.95% | 38 | 73 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8185679' χ2 p-value for Mo17 x B73: '.0006909' Biased in favor of strain: '' |
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| GRMZM2G007057 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.42 x 10-11 | 555 | 343 | 472 | 286 | 61.80% | 37.73% | 898 | 758 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.50e-12' χ2 p-value for Mo17 x B73: '1.42e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G007055 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.584094 x 10-1 | 35 | 19 | 34 | 39 | 64.81% | 53.42% | 54 | 73 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0294564' χ2 p-value for Mo17 x B73: '.5584094' Biased in favor of strain: '' |
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| GRMZM2G007055 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.255711 x 10-1 | 339 | 244 | 160 | 331 | 58.15% | 67.41% | 583 | 491 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000128' χ2 p-value for Mo17 x B73: '.7255711' Biased in favor of strain: '' |
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| GRMZM2G007038 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 4 | 0.00% | 100.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G007038 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 1 | 2 | 100.00% | 66.67% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G007028 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 932 | 243 | 619 | 147 | 79.32% | 19.19% | 1175 | 766 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G007028 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.31 x 10-7 | 237 | 58 | 130 | 75 | 80.34% | 36.59% | 295 | 205 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.31e-07' χ2 p-value for Mo17 x B73: '6.45e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G007025 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 7 | 3 | 66.67% | 30.00% | 3 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.0139063' Biased in favor of strain: '' |
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| GRMZM2G007025 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 8 | 8 | 7 | 11 | 50.00% | 61.11% | 16 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3457786' Biased in favor of strain: '' |
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| GRMZM2G007021 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.88 x 10-8 | 423 | 213 | 331 | 206 | 66.51% | 38.36% | 636 | 537 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.29e-17' χ2 p-value for Mo17 x B73: '6.88e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G007021 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.33 x 10-10 | 445 | 115 | 244 | 274 | 79.46% | 52.90% | 560 | 518 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.33e-10' χ2 p-value for Mo17 x B73: '2.96e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G006981 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.162254 x 10-1 | 156 | 65 | 86 | 95 | 70.59% | 52.49% | 221 | 181 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2162254' χ2 p-value for Mo17 x B73: '.0000519' Biased in favor of strain: '' |
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| GRMZM2G006981 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.14 x 10-26 | 514 | 225 | 557 | 250 | 69.55% | 30.98% | 739 | 807 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.14e-26' χ2 p-value for Mo17 x B73: '3.19e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G006977 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.302628 x 10-1 | 399 | 364 | 201 | 221 | 52.29% | 52.37% | 763 | 422 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2051249' χ2 p-value for Mo17 x B73: '.3302628' Biased in favor of strain: '' |
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| GRMZM2G006977 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.380997 x 10-1 | 55 | 28 | 32 | 87 | 66.27% | 73.11% | 83 | 119 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9380997' χ2 p-value for Mo17 x B73: '.1359961' Biased in favor of strain: '' |
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| GRMZM2G006965 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.35593 x 10-1 | 12 | 2 | 6 | 5 | 85.71% | 45.45% | 14 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1305732' χ2 p-value for Mo17 x B73: '.135593' Biased in favor of strain: '' |
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| GRMZM2G006965 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.316146 x 10-1 | 13 | 10 | 4 | 6 | 56.52% | 60.00% | 23 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5316146' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: '' |
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| GRMZM2G006964 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.830914 x 10-1 | 11 | 13 | 8 | 13 | 45.83% | 61.90% | 24 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6830914' χ2 p-value for Mo17 x B73: '.2752335' Biased in favor of strain: '' |
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| GRMZM2G006964 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G006948 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 3.59 x 10-14 | 398 | 345 | 578 | 294 | 53.57% | 33.72% | 743 | 872 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.59e-14' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G006948 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.919148 x 10-1 | 153 | 172 | 157 | 96 | 47.08% | 37.94% | 325 | 253 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2919148' χ2 p-value for Mo17 x B73: '.0001255' Biased in favor of strain: '' |
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| GRMZM2G006943 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 3 | 4 | 0.00% | 57.14% | 3 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G006943 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G006942 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2335 | 572 | 1241 | 1500 | 80.32% | 54.72% | 2907 | 2741 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G006942 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2132 | 703 | 1820 | 684 | 75.20% | 27.32% | 2835 | 2504 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G006937 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.56 x 10-7 | 99 | 186 | 87 | 183 | 34.74% | 67.78% | 285 | 270 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.56e-07' χ2 p-value for Mo17 x B73: '5.15e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM2G006937 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 20 | 8 | 1 | 9.09% | 11.11% | 22 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.01e-08' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: '' |
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| GRMZM2G006894 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 3 | 16 | 18 | 66.67% | 52.94% | 9 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999862' χ2 p-value for Mo17 x B73: '.089555' Biased in favor of strain: '' |
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| GRMZM2G006894 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.716881 x 10-1 | 174 | 171 | 313 | 239 | 50.43% | 43.30% | 345 | 552 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8716881' χ2 p-value for Mo17 x B73: '.0016347' Biased in favor of strain: '' |
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| GRMZM2G006884 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.53 x 10-23 | 0 | 105 | 0 | 99 | 0.00% | 100.00% | 105 | 99 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.22e-24' χ2 p-value for Mo17 x B73: '2.53e-23' Biased in favor of strain: 'Mo17' |
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| GRMZM2G006884 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.44 x 10-16 | 1 | 50 | 1 | 138 | 1.96% | 99.28% | 51 | 139 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.10e-22' χ2 p-value for Mo17 x B73: '3.44e-16' Biased in favor of strain: 'Mo17' |
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| GRMZM2G006830 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.12 x 10-11 | 0 | 21 | 0 | 88 | 0.00% | 100.00% | 21 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.12e-11' χ2 p-value for Mo17 x B73: '3.28e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM2G006830 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.09 x 10-20 | 0 | 87 | 0 | 94 | 0.00% | 100.00% | 87 | 94 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.09e-20' χ2 p-value for Mo17 x B73: '3.16e-22' Biased in favor of strain: 'Mo17' |
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| GRMZM2G006821 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 8 | 0 | 100.00% | 0.00% | 3 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G006821 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G006806 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.455863 x 10-1 | 12 | 7 | 10 | 11 | 63.16% | 52.38% | 19 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7455863' χ2 p-value for Mo17 x B73: '.1649147' Biased in favor of strain: '' |
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| GRMZM2G006806 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.907458 x 10-1 | 26 | 27 | 46 | 6 | 49.06% | 11.54% | 53 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8907458' χ2 p-value for Mo17 x B73: '2.91e-08' Biased in favor of strain: '' |
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| GRMZM2G006791 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 4 | 4 | 2 | 60.00% | 33.33% | 10 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G006791 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 1 | 1 | 60.00% | 50.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G006790 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.31 x 10-22 | 2886 | 1006 | 1223 | 1709 | 74.15% | 58.29% | 3892 | 2932 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.92e-23' χ2 p-value for Mo17 x B73: '6.31e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G006790 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.8233 x 10-3 | 484 | 235 | 300 | 240 | 67.32% | 44.44% | 719 | 540 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.60e-20' χ2 p-value for Mo17 x B73: '.0098233' Biased in favor of strain: 'B73' |
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| GRMZM2G006763 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.034837 x 10-1 | 74 | 62 | 92 | 66 | 54.41% | 41.77% | 136 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3034837' χ2 p-value for Mo17 x B73: '.0385978' Biased in favor of strain: '' |
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| GRMZM2G006763 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.357409 x 10-1 | 51 | 26 | 33 | 23 | 66.23% | 41.07% | 77 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9357409' χ2 p-value for Mo17 x B73: '.0000484' Biased in favor of strain: '' |
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| GRMZM2G006745 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.26 x 10-7 | 635 | 440 | 358 | 1027 | 59.07% | 74.15% | 1075 | 1385 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.26e-07' χ2 p-value for Mo17 x B73: '3.44e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM2G006745 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.27345 x 10-2 | 518 | 398 | 319 | 264 | 56.55% | 45.28% | 916 | 583 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000734' χ2 p-value for Mo17 x B73: '.0227345' Biased in favor of strain: 'B73' |
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| GRMZM2G006732 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | PEG | 0.0 | 39 | 456 | 536 | 15 | 7.88% | 2.72% | 495 | 551 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G006732 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | PEG | 0.0 | 209 | 5065 | 6801 | 183 | 3.96% | 2.62% | 5274 | 6984 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G006721 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 0 | 1 | 2 | 100.00% | 66.67% | 12 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G006721 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 233 | 25 | 232 | 16 | 90.31% | 6.45% | 258 | 248 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.36e-38' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G006714 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.363 x 10-4 | 87 | 33 | 70 | 35 | 72.50% | 33.33% | 120 | 105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.24e-07' χ2 p-value for Mo17 x B73: '.0006363' Biased in favor of strain: 'B73' |
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| GRMZM2G006714 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.445194 x 10-1 | 29 | 11 | 4 | 9 | 72.50% | 69.23% | 40 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4338641' χ2 p-value for Mo17 x B73: '.8445194' Biased in favor of strain: '' |
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| GRMZM2G006707 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.235215 x 10-1 | 209 | 155 | 160 | 146 | 57.42% | 47.71% | 364 | 306 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046494' χ2 p-value for Mo17 x B73: '.4235215' Biased in favor of strain: '' |
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| GRMZM2G006707 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.514447 x 10-1 | 343 | 149 | 221 | 366 | 69.72% | 62.35% | 492 | 587 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1514447' χ2 p-value for Mo17 x B73: '.0265485' Biased in favor of strain: '' |
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| GRMZM2G006704 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 424 | 29 | 261 | 59 | 93.60% | 18.44% | 453 | 320 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.11e-34' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G006704 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 494 | 37 | 266 | 19 | 93.03% | 6.67% | 531 | 285 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G006673 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0035 x 10-3 | 1639 | 1334 | 1553 | 1375 | 55.13% | 46.96% | 2973 | 2928 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.22e-08' χ2 p-value for Mo17 x B73: '.0010035' Biased in favor of strain: 'B73' |
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| GRMZM2G006673 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.72 x 10-8 | 1750 | 1204 | 947 | 2352 | 59.24% | 71.29% | 2954 | 3299 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.12e-17' χ2 p-value for Mo17 x B73: '1.72e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G006672 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 8 | 1 | 80.00% | 11.11% | 5 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: '' |
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| GRMZM2G006672 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 2 | 4 | 8 | 71.43% | 66.67% | 7 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: '' |