Displaying data sets 34201 - 34300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G08535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.88188 x 10-1 153 33 86 115 82.26% 57.21% 186 201 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.032564'
Avg. expression score for this sample: '384.269'
Avg. expression score in LCM sample: '164.969'
Tissue used: 'pure endosperm, no chalazal'
AT5G08535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.3276 x 10-2 249 71 95 188 77.81% 66.43% 320 283 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.032564'
Avg. expression score for this sample: '455.946'
Avg. expression score in LCM sample: '164.969'
Tissue used: 'full endosperm'
AT5G08535 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.70448 x 10-1 100 51 37 12 66.23% 24.49% 151 49 TAIR8 Avg. embryo expression (dissected): '319.647'
Avg. embryo expression (LCM): '155.375'
AT5G08535 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8638 x 10-2 44 32 57.89% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08535 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.13 x 10-4 457 269 62.95% 726 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08535 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 951 75 92.69% 1026 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08530 CI51 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.21127 x 10-1 13 22 4 29 37.14% 87.88% 35 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.315192'
Avg. expression score for this sample: '1429.04'
Avg. expression score in LCM sample: '972.208'
Tissue used: 'pure endosperm, no chalazal'
AT5G08530 CI51 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.95248 x 10-1 36 38 19 54 48.65% 73.97% 74 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.315192'
Avg. expression score for this sample: '1178.3'
Avg. expression score in LCM sample: '972.208'
Tissue used: 'full endosperm'
AT5G08530 CI51 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.01795 x 10-1 18 35 3 5 33.96% 62.50% 53 8 TAIR8 Avg. embryo expression (dissected): '1615.35'
Avg. embryo expression (LCM): '1047.2'
AT5G08530 CI51 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.1551 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08530 CI51 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.827 x 10-3 69 19 78.41% 88 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08530 CI51 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.06 x 10-4 40 58 40.82% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.1995 x 10-2 409 189 173 478 68.39% 73.43% 598 651 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.2e-13'
Avg. expression score for this sample: '534.617'
Avg. expression score in LCM sample: '195.6'
Tissue used: 'pure endosperm, no chalazal'
AT5G08520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.2 x 10-14 729 210 258 856 77.64% 76.84% 939 1114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.2e-13'
Avg. expression score for this sample: '653.482'
Avg. expression score in LCM sample: '195.6'
Tissue used: 'full endosperm'
AT5G08520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 342 351 159 169 49.35% 51.52% 693 328 TAIR8 Avg. embryo expression (dissected): '754.678'
Avg. embryo expression (LCM): '253.809'
AT5G08520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.31 x 10-4 215 37 85.32% 252 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6 x 10-20 581 62 90.36% 643 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1230 118 91.25% 1348 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 5 0 2 44.44% 100.00% 9 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.192122'
Avg. expression score for this sample: '24.0627'
Avg. expression score in LCM sample: '22.9728'
Tissue used: 'pure endosperm, no chalazal'
AT5G08510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.9403 x 10-2 12 1 1 13 92.31% 92.86% 13 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.192122'
Avg. expression score for this sample: '42.8985'
Avg. expression score in LCM sample: '22.9728'
Tissue used: 'full endosperm'
AT5G08510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.3802 x 10-2 2 12 1 0 14.29% 0.00% 14 1 TAIR8 Avg. embryo expression (dissected): '40.9141'
Avg. embryo expression (LCM): '43.1889'
AT5G08510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.55126 x 10-1 20 6 76.92% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3153 x 10-1 14 9 60.87% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08505 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.07737'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G08505 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.760202'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G08505 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G08505 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08505 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08505 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.8847 x 10-1 47 15 24 43 75.81% 64.18% 62 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.234093'
Avg. expression score for this sample: '318.817'
Avg. expression score in LCM sample: '144.789'
Tissue used: 'pure endosperm, no chalazal'
AT5G08500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.70886 x 10-1 52 21 33 88 71.23% 72.73% 73 121 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.234093'
Avg. expression score for this sample: '304.122'
Avg. expression score in LCM sample: '144.789'
Tissue used: 'full endosperm'
AT5G08500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.50034 x 10-1 10 8 4 9 55.56% 69.23% 18 13 TAIR8 Avg. embryo expression (dissected): '131.271'
Avg. embryo expression (LCM): '94.968'
AT5G08500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.46251 x 10-1 19 3 86.36% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.48688 x 10-1 102 31 76.69% 133 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.7 x 10-5 109 14 88.62% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08490 SLG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.40405 x 10-1 6 2 0 4 75.00% 100.00% 8 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.487747'
Avg. expression score for this sample: '9.10803'
Avg. expression score in LCM sample: '5.76158'
Tissue used: 'pure endosperm, no chalazal'
AT5G08490 SLG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.90605 x 10-1 11 3 6 14 78.57% 70.00% 14 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.487747'
Avg. expression score for this sample: '16.8614'
Avg. expression score in LCM sample: '5.76158'
Tissue used: 'full endosperm'
AT5G08490 SLG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 3 0 1 50.00% 100.00% 6 1 TAIR8 Avg. embryo expression (dissected): '13.6852'
Avg. embryo expression (LCM): '4.92296'
AT5G08490 SLG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08490 SLG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.65515 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08490 SLG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.685082'
Avg. expression score for this sample: '26.0453'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G08480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.81659 x 10-1 6 3 0 6 66.67% 100.00% 9 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.685082'
Avg. expression score for this sample: '119.91'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G08480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.04955'
Avg. embryo expression (LCM): '13.7516'
AT5G08480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08470 PEX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.24182 x 10-1 23 5 10 25 82.14% 71.43% 28 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001038'
Avg. expression score for this sample: '36.7399'
Avg. expression score in LCM sample: '14.6979'
Tissue used: 'pure endosperm, no chalazal'
AT5G08470 PEX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.174 x 10-3 56 5 12 40 91.80% 76.92% 61 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001038'
Avg. expression score for this sample: '60.8709'
Avg. expression score in LCM sample: '14.6979'
Tissue used: 'full endosperm'
AT5G08470 PEX1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.88133 x 10-1 40 33 16 12 54.79% 42.86% 73 28 TAIR8 Avg. embryo expression (dissected): '76.2306'
Avg. embryo expression (LCM): '41.7322'
AT5G08470 PEX1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.7796 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08470 PEX1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.32594 x 10-1 44 7 86.27% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08470 PEX1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.42847 x 10-1 82 16 83.67% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.469 x 10-3 167 117 119 155 58.80% 56.57% 284 274 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.167441'
Avg. expression score for this sample: '328.724'
Avg. expression score in LCM sample: '35.0839'
Tissue used: 'pure endosperm, no chalazal'
AT5G08460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.15451 x 10-1 468 362 234 735 56.39% 75.85% 830 969 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.167441'
Avg. expression score for this sample: '796.876'
Avg. expression score in LCM sample: '35.0839'
Tissue used: 'full endosperm'
AT5G08460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.3562 x 10-1 442 467 143 174 48.62% 54.89% 909 317 TAIR8 Avg. embryo expression (dissected): '1133.39'
Avg. embryo expression (LCM): '1061.04'
AT5G08460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.41 x 10-4 197 62 76.06% 259 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.26847 x 10-1 16 7 69.57% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.61 x 10-4 32 40 44.44% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4232.52'
Avg. expression score in LCM sample: '850.804'
Tissue used: 'pure endosperm, no chalazal'
AT5G08450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4300.54'
Avg. expression score in LCM sample: '850.804'
Tissue used: 'full endosperm'
AT5G08450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2183.99'
Avg. embryo expression (LCM): '976.103'
AT5G08450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.8695'
Avg. expression score in LCM sample: '16.1824'
Tissue used: 'pure endosperm, no chalazal'
AT5G08440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '30.6697'
Avg. expression score in LCM sample: '16.1824'
Tissue used: 'full endosperm'
AT5G08440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '39.6472'
Avg. embryo expression (LCM): '46.09'
AT5G08440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '95.8138'
Avg. expression score in LCM sample: '71.1232'
Tissue used: 'pure endosperm, no chalazal'
AT5G08430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '234.264'
Avg. expression score in LCM sample: '71.1232'
Tissue used: 'full endosperm'
AT5G08430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '195.461'
Avg. embryo expression (LCM): '143.632'
AT5G08430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 2 0 66.67% 0.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.557268'
Avg. expression score for this sample: '186.678'
Avg. expression score in LCM sample: '82.6905'
Tissue used: 'pure endosperm, no chalazal'
AT5G08420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.65339 x 10-1 29 3 25 47 90.62% 65.28% 32 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.557268'
Avg. expression score for this sample: '280.276'
Avg. expression score in LCM sample: '82.6905'
Tissue used: 'full endosperm'
AT5G08420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.23107 x 10-1 9 7 0 3 56.25% 100.00% 16 3 TAIR8 Avg. embryo expression (dissected): '292.011'
Avg. embryo expression (LCM): '332.074'
AT5G08420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.0623 x 10-2 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8018 x 10-2 50 41 54.95% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.75 x 10-4 78 6 92.86% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08415 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '469.097'
Avg. expression score in LCM sample: '413.673'
Tissue used: 'pure endosperm, no chalazal'
AT5G08415 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '323.012'
Avg. expression score in LCM sample: '413.673'
Tissue used: 'full endosperm'
AT5G08415 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '628.326'
Avg. embryo expression (LCM): '535.221'
AT5G08415 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08415 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08415 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08410 FTRA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '95.5141'
Avg. expression score in LCM sample: '43.9909'
Tissue used: 'pure endosperm, no chalazal'
AT5G08410 FTRA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '91.19'
Avg. expression score in LCM sample: '43.9909'
Tissue used: 'full endosperm'
AT5G08410 FTRA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '129.712'
Avg. embryo expression (LCM): '61.5119'
AT5G08410 FTRA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08410 FTRA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08410 FTRA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G08400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '20.192'
Avg. expression score in LCM sample: '4.79152'
Tissue used: 'pure endosperm, no chalazal'
AT5G08400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '47.4088'
Avg. expression score in LCM sample: '4.79152'
Tissue used: 'full endosperm'
AT5G08400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '90.0741'
Avg. embryo expression (LCM): '98.183'
AT5G08400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'