| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G08690 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '908.784' Avg. embryo expression (LCM): '1335.05' |
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| AT5G08690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08690 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '440.579' Avg. expression score in LCM sample: '282.597' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G08680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 0 | 4 | 0.00% | 100.00% | 1 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '388.137' Avg. expression score in LCM sample: '282.597' Tissue used: 'full endosperm' |
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| AT5G08680 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 0 | 4 | 0 | 3 | 0.00% | 100.00% | 4 | 3 | TAIR8 |
Avg. embryo expression (dissected): '645.212' Avg. embryo expression (LCM): '627.301' |
||||
| AT5G08680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 16 | 2 | 88.89% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08680 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 2 | 71.43% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.7845 x 10-2 | 0 | 56 | 0 | 64 | 0.00% | 100.00% | 56 | 64 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00275' Avg. expression score for this sample: '451.987' Avg. expression score in LCM sample: '574.615' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G08670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.3733 x 10-2 | 0 | 28 | 0 | 20 | 0.00% | 100.00% | 28 | 20 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00275' Avg. expression score for this sample: '268.711' Avg. expression score in LCM sample: '574.615' Tissue used: 'full endosperm' |
|||||
| AT5G08670 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.5091 x 10-2 | 1 | 82 | 0 | 47 | 1.20% | 100.00% | 83 | 47 | TAIR8 |
Avg. embryo expression (dissected): '692.605' Avg. embryo expression (LCM): '821.067' |
||||
| AT5G08670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.4 x 10-7 | 24 | 0 | 100.00% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.2 x 10-11 | 48 | 1 | 97.96% | 49 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08670 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-8 | 0 | 29 | 0.00% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.95784 x 10-1 | 20 | 13 | 17 | 20 | 60.61% | 54.05% | 33 | 37 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.472055' Avg. expression score for this sample: '82.0234' Avg. expression score in LCM sample: '23.6636' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G08660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.2516 x 10-2 | 46 | 13 | 22 | 69 | 77.97% | 75.82% | 59 | 91 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.472055' Avg. expression score for this sample: '156.791' Avg. expression score in LCM sample: '23.6636' Tissue used: 'full endosperm' |
|||||
| AT5G08660 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 19 | 17 | 3 | 3 | 52.78% | 50.00% | 36 | 6 | TAIR8 |
Avg. embryo expression (dissected): '59.4164' Avg. embryo expression (LCM): '58.8746' |
||||
| AT5G08660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.2106 x 10-2 | 12 | 0 | 100.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.031 x 10-3 | 36 | 2 | 94.74% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08660 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.45 x 10-4 | 48 | 3 | 94.12% | 51 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '16.0824' Avg. expression score in LCM sample: '10.9646' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G08650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '29.9112' Avg. expression score in LCM sample: '10.9646' Tissue used: 'full endosperm' |
|||||||
| AT5G08650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '38.0838' Avg. embryo expression (LCM): '31.9741' |
||||||
| AT5G08650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08640 | FLS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 0 | 1 | 66.67% | 100.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '45.7692' Avg. expression score in LCM sample: '57.4248' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT5G08640 | FLS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 2 | 2 | 1 | 60.00% | 33.33% | 5 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '142.573' Avg. expression score in LCM sample: '57.4248' Tissue used: 'full endosperm' |
||||
| AT5G08640 | FLS1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 4 | 3 | 1 | 1 | 57.14% | 50.00% | 7 | 2 | TAIR8 |
Avg. embryo expression (dissected): '187.084' Avg. embryo expression (LCM): '182.099' |
|||
| AT5G08640 | FLS1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G08640 | FLS1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.06037 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G08640 | FLS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.44505 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G08630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '176.179' Avg. expression score in LCM sample: '63.5244' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G08630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '357.204' Avg. expression score in LCM sample: '63.5244' Tissue used: 'full endosperm' |
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| AT5G08630 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '265.973' Avg. embryo expression (LCM): '160.461' |
||||||
| AT5G08630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08630 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08620 | STRS2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '35.2224' Avg. expression score in LCM sample: '10.9646' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G08620 | STRS2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '51.0486' Avg. expression score in LCM sample: '10.9646' Tissue used: 'full endosperm' |
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| AT5G08620 | STRS2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '146.533' Avg. embryo expression (LCM): '190.689' |
|||||
| AT5G08620 | STRS2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08620 | STRS2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08620 | STRS2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08610 | PDE340 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '114.928' Avg. expression score in LCM sample: '39.6256' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G08610 | PDE340 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '89.8854' Avg. expression score in LCM sample: '39.6256' Tissue used: 'full endosperm' |
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| AT5G08610 | PDE340 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '360.339' Avg. embryo expression (LCM): '504.629' |
|||||
| AT5G08610 | PDE340 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08610 | PDE340 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08610 | PDE340 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '10.129' Avg. expression score in LCM sample: '6.15843' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G08600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '10.6384' Avg. expression score in LCM sample: '6.15843' Tissue used: 'full endosperm' |
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| AT5G08600 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.11215' Avg. embryo expression (LCM): '12.9228' |
|||||
| AT5G08600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 2 | 33.33% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08600 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08590 | SNRK2.1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.03263 x 10-1 | 116 | 70 | 58 | 171 | 62.37% | 74.67% | 186 | 229 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.262284' Avg. expression score for this sample: '161.353' Avg. expression score in LCM sample: '50.5167' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G08590 | SNRK2.1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.41293 x 10-1 | 138 | 73 | 71 | 187 | 65.40% | 72.48% | 211 | 258 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.262284' Avg. expression score for this sample: '249.609' Avg. expression score in LCM sample: '50.5167' Tissue used: 'full endosperm' |
||||
| AT5G08590 | SNRK2.1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.96199 x 10-1 | 128 | 126 | 32 | 42 | 50.39% | 56.76% | 254 | 74 | TAIR8 |
Avg. embryo expression (dissected): '201.807' Avg. embryo expression (LCM): '100.707' |
|||
| AT5G08590 | SNRK2.1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.6625 x 10-2 | 29 | 23 | 55.77% | 52 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G08590 | SNRK2.1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.6 x 10-5 | 51 | 4 | 92.73% | 55 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G08590 | SNRK2.1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.6 x 10-12 | 114 | 5 | 95.80% | 119 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G08580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.32822 x 10-1 | 14 | 6 | 2 | 15 | 70.00% | 88.24% | 20 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.560908' Avg. expression score for this sample: '54.3758' Avg. expression score in LCM sample: '21.6941' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G08580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.96558 x 10-1 | 33 | 22 | 21 | 58 | 60.00% | 73.42% | 55 | 79 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.560908' Avg. expression score for this sample: '136.6' Avg. expression score in LCM sample: '21.6941' Tissue used: 'full endosperm' |
|||||
| AT5G08580 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 18 | 21 | 4 | 8 | 46.15% | 66.67% | 39 | 12 | TAIR8 |
Avg. embryo expression (dissected): '116.58' Avg. embryo expression (LCM): '83.0247' |
||||
| AT5G08580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 3 | 72.73% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.5601 x 10-2 | 28 | 3 | 90.32% | 31 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08580 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.1 x 10-4 | 46 | 3 | 93.88% | 49 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '254.342' Avg. expression score in LCM sample: '181.402' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G08570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '449.839' Avg. expression score in LCM sample: '181.402' Tissue used: 'full endosperm' |
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| AT5G08570 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '153.999' Avg. embryo expression (LCM): '172.291' |
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| AT5G08570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08570 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G08565 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 0 | 1 | 1 | 100.00% | 50.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.681659' Avg. expression score for this sample: '5.87018' Avg. expression score in LCM sample: '6.70225' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G08565 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 0 | 2 | 5 | 100.00% | 71.43% | 2 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.681659' Avg. expression score for this sample: '6.24269' Avg. expression score in LCM sample: '6.70225' Tissue used: 'full endosperm' |
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| AT5G08565 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.89624' Avg. embryo expression (LCM): '0' |
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| AT5G08565 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.25 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08565 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.76972 x 10-1 | 16 | 8 | 66.67% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08565 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.33148 x 10-1 | 10 | 6 | 62.50% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.15838 x 10-1 | 139 | 46 | 61 | 102 | 75.14% | 62.58% | 185 | 163 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.008258' Avg. expression score for this sample: '367.375' Avg. expression score in LCM sample: '176.831' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G08560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.396 x 10-3 | 421 | 116 | 170 | 319 | 78.40% | 65.24% | 537 | 489 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.008258' Avg. expression score for this sample: '400.039' Avg. expression score in LCM sample: '176.831' Tissue used: 'full endosperm' |
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| AT5G08560 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.95555 x 10-1 | 51 | 33 | 23 | 8 | 60.71% | 25.81% | 84 | 31 | TAIR8 |
Avg. embryo expression (dissected): '181.924' Avg. embryo expression (LCM): '103.47' |
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| AT5G08560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.23569 x 10-1 | 87 | 30 | 74.36% | 117 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.8472 x 10-2 | 437 | 133 | 76.67% | 570 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08560 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.5 x 10-22 | 653 | 79 | 89.21% | 732 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08550 | ILP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.3522 x 10-1 | 445 | 200 | 185 | 434 | 68.99% | 70.11% | 645 | 619 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001899' Avg. expression score for this sample: '221.582' Avg. expression score in LCM sample: '159.943' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G08550 | ILP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.318 x 10-3 | 343 | 164 | 155 | 488 | 67.65% | 75.89% | 507 | 643 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001899' Avg. expression score for this sample: '160.374' Avg. expression score in LCM sample: '159.943' Tissue used: 'full endosperm' |
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| AT5G08550 | ILP1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.03424 x 10-1 | 440 | 445 | 129 | 148 | 49.72% | 53.43% | 885 | 277 | TAIR8 |
Avg. embryo expression (dissected): '317.13' Avg. embryo expression (LCM): '177.704' |
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| AT5G08550 | ILP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.882 x 10-3 | 52 | 39 | 57.14% | 91 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G08550 | ILP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.33372 x 10-1 | 828 | 368 | 69.23% | 1196 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G08550 | ILP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.08 x 10-4 | 967 | 296 | 76.56% | 1263 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G08540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.00724 x 10-1 | 99 | 41 | 70 | 83 | 70.71% | 54.25% | 140 | 153 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.633665' Avg. expression score for this sample: '114.383' Avg. expression score in LCM sample: '103.885' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G08540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.56683 x 10-1 | 61 | 19 | 38 | 68 | 76.25% | 64.15% | 80 | 106 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.633665' Avg. expression score for this sample: '48.7133' Avg. expression score in LCM sample: '103.885' Tissue used: 'full endosperm' |
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| AT5G08540 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.64799 x 10-1 | 141 | 166 | 53 | 51 | 45.93% | 49.04% | 307 | 104 | TAIR8 |
Avg. embryo expression (dissected): '227.177' Avg. embryo expression (LCM): '333.958' |
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| AT5G08540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.69324 x 10-1 | 27 | 21 | 56.25% | 48 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.1 x 10-7 | 88 | 9 | 90.72% | 97 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G08540 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.033 x 10-3 | 119 | 35 | 77.27% | 154 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |