GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G012758	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.9319 x 10^-3	12	29	14	53	29.27%	79.10%	41	67	RefGen V2	χ2 p-value for B73 x Mo17: '.0079319' χ2 p-value for Mo17 x B73: '1.89e-06' Biased in favor of strain: 'Mo17'
GRMZM2G012758	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	23	160	8	359	12.57%	97.82%	183	367	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '9.80e-37' Biased in favor of strain: 'Mo17'
GRMZM2G012728	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	6	24	100.00%	80.00%	1	30	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1213353' Biased in favor of strain: ''
GRMZM2G012728	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.098153 x 10^-1	38	69	31	34	35.51%	52.31%	107	65	RefGen V2	χ2 p-value for B73 x Mo17: '.0027276' χ2 p-value for Mo17 x B73: '.7098153' Biased in favor of strain: ''
GRMZM2G012724	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.34 x 10^-7	135	56	57	14	70.68%	19.72%	191	71	RefGen V2	χ2 p-value for B73 x Mo17: '1.09e-08' χ2 p-value for Mo17 x B73: '3.34e-07' Biased in favor of strain: 'B73'
GRMZM2G012724	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	4	3	100.00%	42.86%	3	7	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.1814491' Biased in favor of strain: ''
GRMZM2G012690	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.78 x 10^-18	303	337	167	699	47.34%	80.72%	640	866	RefGen V2	χ2 p-value for B73 x Mo17: '3.40e-25' χ2 p-value for Mo17 x B73: '1.78e-18' Biased in favor of strain: 'Mo17'
GRMZM2G012690	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.25 x 10^-15	472	742	359	740	38.88%	67.33%	1214	1099	RefGen V2	χ2 p-value for B73 x Mo17: '9.25e-15' χ2 p-value for Mo17 x B73: '1.43e-30' Biased in favor of strain: 'Mo17'
GRMZM2G012685	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.075 x 10^-4	15	0	21	0	100.00%	0.00%	15	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '4.59e-06' Biased in favor of strain: 'B73'
GRMZM2G012685	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.37 x 10^-8	57	0	69	0	100.00%	0.00%	57	69	RefGen V2	χ2 p-value for B73 x Mo17: '9.37e-08' χ2 p-value for Mo17 x B73: '7.29e-32' Biased in favor of strain: 'B73'
GRMZM2G012654	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	5	100.00%	71.43%	2	7	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.7892681' Biased in favor of strain: ''
GRMZM2G012654	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	4	5	3	55.56%	37.50%	9	8	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G012636	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.62 x 10^-5	18	1	21	2	94.74%	8.70%	19	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0000962' χ2 p-value for Mo17 x B73: '.0000744' Biased in favor of strain: 'B73'
GRMZM2G012636	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1938 x 10^-3	21	0	42	5	100.00%	10.64%	21	47	RefGen V2	χ2 p-value for B73 x Mo17: '.0011938' χ2 p-value for Mo17 x B73: '3.69e-16' Biased in favor of strain: 'B73'
GRMZM2G012631	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.98 x 10^-7	233	55	127	120	80.90%	48.58%	288	247	RefGen V2	χ2 p-value for B73 x Mo17: '2.98e-07' χ2 p-value for Mo17 x B73: '1.65e-09' Biased in favor of strain: 'B73'
GRMZM2G012631	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.07 x 10^-7	242	80	150	71	75.16%	32.13%	322	221	RefGen V2	χ2 p-value for B73 x Mo17: '1.75e-19' χ2 p-value for Mo17 x B73: '1.07e-07' Biased in favor of strain: 'B73'
GRMZM2G012628	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.723224 x 10^-1	277	241	208	231	53.47%	52.62%	518	439	RefGen V2	χ2 p-value for B73 x Mo17: '.1137068' χ2 p-value for Mo17 x B73: '.2723224' Biased in favor of strain: ''
GRMZM2G012628	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.73231 x 10^-2	466	157	233	403	74.80%	63.36%	623	636	RefGen V2	χ2 p-value for B73 x Mo17: '.0000166' χ2 p-value for Mo17 x B73: '.0773231' Biased in favor of strain: ''
GRMZM2G012601	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.142287 x 10^-1	20	7	20	22	74.07%	52.38%	27	42	RefGen V2	χ2 p-value for B73 x Mo17: '.4142287' χ2 p-value for Mo17 x B73: '.0495346' Biased in favor of strain: ''
GRMZM2G012601	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.50891 x 10^-2	48	21	35	22	69.57%	38.60%	69	57	RefGen V2	χ2 p-value for B73 x Mo17: '.0011524' χ2 p-value for Mo17 x B73: '.0850891' Biased in favor of strain: ''
GRMZM2G012584	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	640	218	604	169	74.59%	21.86%	858	773	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G012584	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.353 x 10^-4	146	41	91	99	78.07%	52.11%	187	190	RefGen V2	χ2 p-value for B73 x Mo17: '.0009353' χ2 p-value for Mo17 x B73: '.0000206' Biased in favor of strain: 'B73'
GRMZM2G012566	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.092261 x 10^-1	125	69	72	100	64.43%	58.14%	194	172	RefGen V2	χ2 p-value for B73 x Mo17: '.5092261' χ2 p-value for Mo17 x B73: '.0176767' Biased in favor of strain: ''
GRMZM2G012566	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.53473 x 10^-2	76	50	50	30	60.32%	37.50%	126	80	RefGen V2	χ2 p-value for B73 x Mo17: '.0205439' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: 'B73'
GRMZM2G012546	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.46707 x 10^-2	18	2	19	10	90.00%	34.48%	20	29	RefGen V2	χ2 p-value for B73 x Mo17: '.0003466' χ2 p-value for Mo17 x B73: '.0946707' Biased in favor of strain: ''
GRMZM2G012546	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G012501	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.31 x 10^-19	2339	810	1290	1856	74.28%	59.00%	3149	3146	RefGen V2	χ2 p-value for B73 x Mo17: '1.31e-19' χ2 p-value for Mo17 x B73: '7.02e-20' Biased in favor of strain: 'B73'
GRMZM2G012501	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.12773 x 10^-2	1176	832	911	806	58.57%	46.94%	2008	1717	RefGen V2	χ2 p-value for B73 x Mo17: '1.63e-14' χ2 p-value for Mo17 x B73: '.0112773' Biased in favor of strain: 'B73'
GRMZM2G012479	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.56527 x 10^-2	112	81	96	63	58.03%	39.62%	193	159	RefGen V2	χ2 p-value for B73 x Mo17: '.0256527' χ2 p-value for Mo17 x B73: '.0088688' Biased in favor of strain: 'B73'
GRMZM2G012479	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.494 x 10^-4	58	9	35	4	86.57%	10.26%	67	39	RefGen V2	χ2 p-value for B73 x Mo17: '.0005494' χ2 p-value for Mo17 x B73: '7.84e-14' Biased in favor of strain: 'B73'
GRMZM2G012453	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.0861 x 10^-3	924	395	578	941	70.05%	61.95%	1319	1519	RefGen V2	χ2 p-value for B73 x Mo17: '.0090861' χ2 p-value for Mo17 x B73: '.0000959' Biased in favor of strain: 'B73'
GRMZM2G012453	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.554526 x 10^-1	586	381	413	422	60.60%	50.54%	967	835	RefGen V2	χ2 p-value for B73 x Mo17: '4.33e-11' χ2 p-value for Mo17 x B73: '.7554526' Biased in favor of strain: ''
GRMZM2G012413	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	939	201	685	140	82.37%	16.97%	1140	825	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G012413	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.194088 x 10^-1	40	22	40	66	64.52%	62.26%	62	106	RefGen V2	χ2 p-value for B73 x Mo17: '.7194088' χ2 p-value for Mo17 x B73: '.3362885' Biased in favor of strain: ''
GRMZM2G012393	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.53 x 10^-8	867	297	458	583	74.48%	56.00%	1164	1041	RefGen V2	χ2 p-value for B73 x Mo17: '1.53e-08' χ2 p-value for Mo17 x B73: '2.92e-13' Biased in favor of strain: 'B73'
GRMZM2G012393	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.03854 x 10^-2	315	187	249	195	62.75%	43.92%	502	444	RefGen V2	χ2 p-value for B73 x Mo17: '1.11e-08' χ2 p-value for Mo17 x B73: '.0103854' Biased in favor of strain: 'B73'
GRMZM2G012342	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.688114 x 10^-1	41	36	52	34	53.25%	39.53%	77	86	RefGen V2	χ2 p-value for B73 x Mo17: '.5688114' χ2 p-value for Mo17 x B73: '.0522595' Biased in favor of strain: ''
GRMZM2G012342	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.109795 x 10^-1	24	7	13	27	77.42%	67.50%	31	40	RefGen V2	χ2 p-value for B73 x Mo17: '.2040921' χ2 p-value for Mo17 x B73: '.9109795' Biased in favor of strain: ''
GRMZM2G012340	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		30	6	4	1	83.33%	20.00%	36	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0338967' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: ''
GRMZM2G012340	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	0	0	50.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G012326	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.02 x 10^-5	134	232	128	200	36.61%	60.98%	366	328	RefGen V2	χ2 p-value for B73 x Mo17: '3.01e-07' χ2 p-value for Mo17 x B73: '.0000702' Biased in favor of strain: 'Mo17'
GRMZM2G012326	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.5384 x 10^-3	219	188	118	320	53.81%	73.06%	407	438	RefGen V2	χ2 p-value for B73 x Mo17: '3.73e-08' χ2 p-value for Mo17 x B73: '.0045384' Biased in favor of strain: 'Mo17'
GRMZM2G012319	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1512	361	891	725	80.73%	44.86%	1873	1616	RefGen V2	χ2 p-value for B73 x Mo17: '4.09e-38' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G012319	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.31 x 10^-13	687	382	494	291	64.27%	37.07%	1069	785	RefGen V2	χ2 p-value for B73 x Mo17: '1.07e-20' χ2 p-value for Mo17 x B73: '4.31e-13' Biased in favor of strain: 'B73'
GRMZM2G012284	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.167442 x 10^-1	119	96	128	90	55.35%	41.28%	215	218	RefGen V2	χ2 p-value for B73 x Mo17: '.1167442' χ2 p-value for Mo17 x B73: '.0100622' Biased in favor of strain: ''
GRMZM2G012284	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.638311 x 10^-1	160	105	92	180	60.38%	66.18%	265	272	RefGen V2	χ2 p-value for B73 x Mo17: '.0298598' χ2 p-value for Mo17 x B73: '.8638311' Biased in favor of strain: ''
GRMZM2G012280	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.88 x 10^-6	1041	367	476	719	73.93%	60.17%	1408	1195	RefGen V2	χ2 p-value for B73 x Mo17: '7.25e-09' χ2 p-value for Mo17 x B73: '1.88e-06' Biased in favor of strain: 'B73'
GRMZM2G012280	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1235	571	1343	695	68.38%	34.10%	1806	2038	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G012276	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	2	3	75.00%	60.00%	4	5	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G012276	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	1	100.00%	50.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G012263	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G012263	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	4	0	1	42.86%	100.00%	7	1	RefGen V2	χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G012229	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.024018 x 10^-1	132	134	201	165	49.62%	45.08%	266	366	RefGen V2	χ2 p-value for B73 x Mo17: '.9024018' χ2 p-value for Mo17 x B73: '.0598699' Biased in favor of strain: ''
GRMZM2G012229	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.463331 x 10^-1	24	14	16	49	63.16%	75.38%	38	65	RefGen V2	χ2 p-value for B73 x Mo17: '.6463331' χ2 p-value for Mo17 x B73: '.1359619' Biased in favor of strain: ''
GRMZM2G012224	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.936239 x 10^-1	1624	836	1731	3683	66.02%	68.03%	2460	5414	RefGen V2	χ2 p-value for B73 x Mo17: '.4936239' χ2 p-value for Mo17 x B73: '.0336853' Biased in favor of strain: ''
GRMZM2G012224	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.32525 x 10^-2	8892	7926	8701	8474	52.87%	49.34%	16818	17175	RefGen V2	χ2 p-value for B73 x Mo17: '9.41e-14' χ2 p-value for Mo17 x B73: '.0832525' Biased in favor of strain: ''
GRMZM2G012216	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.744241 x 10^-1	32	25	27	24	56.14%	47.06%	57	51	RefGen V2	χ2 p-value for B73 x Mo17: '.3538369' χ2 p-value for Mo17 x B73: '.6744241' Biased in favor of strain: ''
GRMZM2G012216	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.815115 x 10^-1	13	5	8	18	72.22%	69.23%	18	26	RefGen V2	χ2 p-value for B73 x Mo17: '.6170881' χ2 p-value for Mo17 x B73: '.7815115' Biased in favor of strain: ''
GRMZM2G012213	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.228377 x 10^-1	249	104	136	210	70.54%	60.69%	353	346	RefGen V2	χ2 p-value for B73 x Mo17: '.1228377' χ2 p-value for Mo17 x B73: '.0184288' Biased in favor of strain: ''
GRMZM2G012213	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.42 x 10^-5	326	221	318	223	59.60%	41.22%	547	541	RefGen V2	χ2 p-value for B73 x Mo17: '7.14e-06' χ2 p-value for Mo17 x B73: '.0000442' Biased in favor of strain: 'B73'
GRMZM2G012176	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.22 x 10^-5	233	150	208	129	60.84%	38.28%	383	337	RefGen V2	χ2 p-value for B73 x Mo17: '.0000222' χ2 p-value for Mo17 x B73: '.0000168' Biased in favor of strain: 'B73'
GRMZM2G012176	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.09457 x 10^-2	212	68	28	87	75.71%	75.65%	280	115	RefGen V2	χ2 p-value for B73 x Mo17: '.0013204' χ2 p-value for Mo17 x B73: '.0409457' Biased in favor of strain: ''
GRMZM2G012174	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.4 x 10^-7	164	32	76	45	83.67%	37.19%	196	121	RefGen V2	χ2 p-value for B73 x Mo17: '4.40e-07' χ2 p-value for Mo17 x B73: '6.06e-12' Biased in favor of strain: 'B73'
GRMZM2G012174	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.67 x 10^-6	46	11	36	6	80.70%	14.29%	57	42	RefGen V2	χ2 p-value for B73 x Mo17: '3.55e-06' χ2 p-value for Mo17 x B73: '3.67e-06' Biased in favor of strain: 'B73'
GRMZM2G012160	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.6618 x 10^-3	51	28	77	43	64.56%	35.83%	79	120	RefGen V2	χ2 p-value for B73 x Mo17: '.0096618' χ2 p-value for Mo17 x B73: '.0019108' Biased in favor of strain: 'B73'
GRMZM2G012160	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.432 x 10^-3	31	3	42	18	91.18%	30.00%	34	60	RefGen V2	χ2 p-value for B73 x Mo17: '.002432' χ2 p-value for Mo17 x B73: '1.69e-09' Biased in favor of strain: 'B73'
GRMZM2G012156	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.595515 x 10^-1	60	34	43	69	63.83%	61.61%	94	112	RefGen V2	χ2 p-value for B73 x Mo17: '.5595515' χ2 p-value for Mo17 x B73: '.2560148' Biased in favor of strain: ''
GRMZM2G012156	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.38578 x 10^-1	33	27	22	9	55.00%	29.03%	60	31	RefGen V2	χ2 p-value for B73 x Mo17: '.438578' χ2 p-value for Mo17 x B73: '.0195503' Biased in favor of strain: ''
GRMZM2G012140	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.170751 x 10^-1	23	7	9	7	76.67%	43.75%	30	16	RefGen V2	χ2 p-value for B73 x Mo17: '.003487' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: ''
GRMZM2G012140	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		14	2	0	8	87.50%	100.00%	16	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0771021' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G012126	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.591 x 10^-4	182	54	105	112	77.12%	51.61%	236	217	RefGen V2	χ2 p-value for B73 x Mo17: '.0006591' χ2 p-value for Mo17 x B73: '2.55e-06' Biased in favor of strain: 'B73'
GRMZM2G012126	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.283 x 10^-4	88	44	130	51	66.67%	28.18%	132	181	RefGen V2	χ2 p-value for B73 x Mo17: '.0001283' χ2 p-value for Mo17 x B73: '4.31e-09' Biased in favor of strain: 'B73'
GRMZM2G012123	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.086678 x 10^-1	24	1	19	12	96.00%	38.71%	25	31	RefGen V2	χ2 p-value for B73 x Mo17: '4.22e-06' χ2 p-value for Mo17 x B73: '.2086678' Biased in favor of strain: ''
GRMZM2G012123	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.445321 x 10^-1	9	4	7	5	69.23%	41.67%	13	12	RefGen V2	χ2 p-value for B73 x Mo17: '.8445321' χ2 p-value for Mo17 x B73: '.0661925' Biased in favor of strain: ''
GRMZM2G012119	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.62 x 10^-14	116	0	43	0	100.00%	0.00%	116	43	RefGen V2	χ2 p-value for B73 x Mo17: '2.62e-14' χ2 p-value for Mo17 x B73: '1.80e-20' Biased in favor of strain: 'B73'
GRMZM2G012119	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.088094 x 10^-1	10	4	12	5	71.43%	29.41%	14	17	RefGen V2	χ2 p-value for B73 x Mo17: '.1088094' χ2 p-value for Mo17 x B73: '.0895551' Biased in favor of strain: ''
GRMZM2G012117	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	12	3	80.00%	20.00%	5	15	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.0201368' Biased in favor of strain: ''
GRMZM2G012117	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	2	13	3	75.00%	18.75%	8	16	RefGen V2	χ2 p-value for B73 x Mo17: '.6170834' χ2 p-value for Mo17 x B73: '.0000479' Biased in favor of strain: ''
GRMZM2G012102	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	4	5	4	75.00%	44.44%	16	9	RefGen V2	χ2 p-value for B73 x Mo17: '.4795104' χ2 p-value for Mo17 x B73: '.1572991' Biased in favor of strain: ''
GRMZM2G012102	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.961439 x 10^-1	30	17	28	22	63.83%	44.00%	47	50	RefGen V2	χ2 p-value for B73 x Mo17: '.0579277' χ2 p-value for Mo17 x B73: '.3961439' Biased in favor of strain: ''
GRMZM2G012071	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.795001 x 10^-1	186	71	95	105	72.37%	52.50%	257	200	RefGen V2	χ2 p-value for B73 x Mo17: '7.31e-13' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G012071	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.77 x 10^-7	1976	613	798	1272	76.32%	61.45%	2589	2070	RefGen V2	χ2 p-value for B73 x Mo17: '1.96e-25' χ2 p-value for Mo17 x B73: '4.77e-07' Biased in favor of strain: 'B73'
GRMZM2G012052	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.206884 x 10^-1	78	30	45	66	72.22%	59.46%	108	111	RefGen V2	χ2 p-value for B73 x Mo17: '.2206884' χ2 p-value for Mo17 x B73: '.1072287' Biased in favor of strain: ''
GRMZM2G012052	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.83 x 10^-6	122	59	113	43	67.40%	27.56%	181	156	RefGen V2	χ2 p-value for B73 x Mo17: '2.83e-06' χ2 p-value for Mo17 x B73: '2.09e-08' Biased in favor of strain: 'B73'
GRMZM2G012046	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.7276 x 10^-3	79	29	38	69	73.15%	64.49%	108	107	RefGen V2	χ2 p-value for B73 x Mo17: '1.50e-06' χ2 p-value for Mo17 x B73: '.0027276' Biased in favor of strain: ''
GRMZM2G012046	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.070006 x 10^-1	1148	563	468	882	67.10%	65.33%	1711	1350	RefGen V2	χ2 p-value for B73 x Mo17: '.7070006' χ2 p-value for Mo17 x B73: '.2986967' Biased in favor of strain: ''
GRMZM2G012044	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.45 x 10^-11	357	81	194	174	81.51%	47.28%	438	368	RefGen V2	χ2 p-value for B73 x Mo17: '4.45e-11' χ2 p-value for Mo17 x B73: '3.07e-15' Biased in favor of strain: 'B73'
GRMZM2G012044	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.48 x 10^-22	442	173	455	207	71.87%	31.27%	615	662	RefGen V2	χ2 p-value for B73 x Mo17: '2.06e-27' χ2 p-value for Mo17 x B73: '5.48e-22' Biased in favor of strain: 'B73'
GRMZM2G012041	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.618044 x 10^-1	98	71	67	65	57.99%	49.24%	169	132	RefGen V2	χ2 p-value for B73 x Mo17: '.0378087' χ2 p-value for Mo17 x B73: '.8618044' Biased in favor of strain: ''
GRMZM2G012041	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.158541 x 10^-1	55	18	41	47	75.34%	53.41%	73	88	RefGen V2	χ2 p-value for B73 x Mo17: '.1158541' χ2 p-value for Mo17 x B73: '.0083341' Biased in favor of strain: ''
GRMZM2G012031	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.16 x 10^-9	1284	465	831	1046	73.41%	55.73%	1749	1877	RefGen V2	χ2 p-value for B73 x Mo17: '2.16e-09' χ2 p-value for Mo17 x B73: '8.83e-24' Biased in favor of strain: 'B73'
GRMZM2G012031	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.47 x 10^-14	1301	854	1153	822	60.37%	41.62%	2155	1975	RefGen V2	χ2 p-value for B73 x Mo17: '6.03e-22' χ2 p-value for Mo17 x B73: '9.47e-14' Biased in favor of strain: 'B73'
GRMZM2G011998	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.912971 x 10^-1	224	173	158	146	56.42%	48.03%	397	304	RefGen V2	χ2 p-value for B73 x Mo17: '.0104788' χ2 p-value for Mo17 x B73: '.4912971' Biased in favor of strain: ''
GRMZM2G011998	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.158678 x 10^-1	120	59	99	213	67.04%	68.27%	179	312	RefGen V2	χ2 p-value for B73 x Mo17: '.9158678' χ2 p-value for Mo17 x B73: '.5481866' Biased in favor of strain: ''
GRMZM2G011980	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.976089 x 10^-1	34	19	37	47	64.15%	55.95%	53	84	RefGen V2	χ2 p-value for B73 x Mo17: '.6976089' χ2 p-value for Mo17 x B73: '.0372425' Biased in favor of strain: ''
GRMZM2G011980	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.89 x 10^-8	170	67	160	74	71.73%	31.62%	237	234	RefGen V2	χ2 p-value for B73 x Mo17: '2.22e-11' χ2 p-value for Mo17 x B73: '1.89e-08' Biased in favor of strain: 'B73'
GRMZM2G011932	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.15 x 10^-5	149	48	144	83	75.63%	36.56%	197	227	RefGen V2	χ2 p-value for B73 x Mo17: '6.20e-13' χ2 p-value for Mo17 x B73: '.0000515' Biased in favor of strain: 'B73'
GRMZM2G011932	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.109938 x 10^-1	158	75	37	136	67.81%	78.61%	233	173	RefGen V2	χ2 p-value for B73 x Mo17: '.7109938' χ2 p-value for Mo17 x B73: '.0008587' Biased in favor of strain: ''
GRMZM2G011923	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.1 x 10^-22	1706	531	1173	737	76.26%	38.59%	2237	1910	RefGen V2	χ2 p-value for B73 x Mo17: '6.10e-22' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G011923	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2139	1141	2383	1412	65.21%	37.21%	3280	3795	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'

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