| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G015753 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.33763 x 10-2 | 51 | 26 | 20 | 39 | 66.23% | 66.10% | 77 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0043855' χ2 p-value for Mo17 x B73: '.0133763' Biased in favor of strain: '' |
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| GRMZM2G015753 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 3 | 100.00% | 75.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: '' |
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| GRMZM2G015739 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.41754 x 10-2 | 69 | 21 | 28 | 29 | 76.67% | 50.88% | 90 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0441754' χ2 p-value for Mo17 x B73: '.0114459' Biased in favor of strain: '' |
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| GRMZM2G015739 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.247558 x 10-1 | 36 | 23 | 29 | 37 | 61.02% | 56.06% | 59 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0905591' χ2 p-value for Mo17 x B73: '.3247558' Biased in favor of strain: '' |
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| GRMZM2G015735 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.627 x 10-4 | 161 | 104 | 137 | 84 | 60.75% | 38.01% | 265 | 221 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004627' χ2 p-value for Mo17 x B73: '.0003636' Biased in favor of strain: 'B73' |
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| GRMZM2G015735 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.888442 x 10-1 | 55 | 11 | 15 | 21 | 83.33% | 58.33% | 66 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0040756' χ2 p-value for Mo17 x B73: '.2888442' Biased in favor of strain: '' |
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| GRMZM2G015730 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.060335 x 10-1 | 187 | 75 | 157 | 160 | 71.37% | 50.47% | 262 | 317 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1060335' χ2 p-value for Mo17 x B73: '9.59e-10' Biased in favor of strain: '' |
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| GRMZM2G015730 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.4909 x 10-3 | 236 | 162 | 202 | 143 | 59.30% | 41.45% | 398 | 345 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002078' χ2 p-value for Mo17 x B73: '.0014909' Biased in favor of strain: 'B73' |
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| GRMZM2G015727 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.61 x 10-4 | 223 | 122 | 165 | 108 | 64.64% | 39.56% | 345 | 273 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.40e-08' χ2 p-value for Mo17 x B73: '.000561' Biased in favor of strain: 'B73' |
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| GRMZM2G015727 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.98 x 10-7 | 263 | 68 | 156 | 135 | 79.46% | 46.39% | 331 | 291 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.98e-07' χ2 p-value for Mo17 x B73: '2.19e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G015703 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.419448 x 10-1 | 137 | 59 | 59 | 101 | 69.90% | 63.12% | 196 | 160 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3372657' χ2 p-value for Mo17 x B73: '.3419448' Biased in favor of strain: '' |
||||
| GRMZM2G015703 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.11 x 10-6 | 421 | 263 | 347 | 230 | 61.55% | 39.86% | 684 | 577 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.53e-09' χ2 p-value for Mo17 x B73: '1.11e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G015692 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.693273 x 10-1 | 85 | 68 | 83 | 51 | 55.56% | 38.06% | 153 | 134 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1693273' χ2 p-value for Mo17 x B73: '.0057031' Biased in favor of strain: '' |
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| GRMZM2G015692 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 7 | 0 | 0 | 0.00% | 7 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G015666 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 3 | 100.00% | 100.00% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G015666 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3208 | 1665 | 3196 | 1768 | 65.83% | 35.62% | 4873 | 4964 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G015648 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G015648 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 2 | 4 | 4 | 77.78% | 50.00% | 9 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795075' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: '' |
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| GRMZM2G015642 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2316 | 428 | 1227 | 913 | 84.40% | 42.66% | 2744 | 2140 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G015642 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 699 | 287 | 546 | 210 | 70.89% | 27.78% | 986 | 756 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.42e-34' Biased in favor of strain: 'B73' |
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| GRMZM2G015637 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G015637 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 0 | 1 | 100.00% | 100.00% | 9 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G015610 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.606 x 10-4 | 710 | 274 | 461 | 675 | 72.15% | 59.42% | 984 | 1136 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002606' χ2 p-value for Mo17 x B73: '2.20e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G015610 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3349 x 10-3 | 874 | 438 | 546 | 445 | 66.62% | 44.90% | 1312 | 991 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.27e-33' χ2 p-value for Mo17 x B73: '.0013349' Biased in favor of strain: 'B73' |
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| GRMZM2G015599 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G015599 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 4 | 1 | 20.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G015596 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.00444 x 10-2 | 299 | 116 | 202 | 328 | 72.05% | 61.89% | 415 | 530 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0200444' χ2 p-value for Mo17 x B73: '.0195788' Biased in favor of strain: '' |
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| GRMZM2G015596 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.668506 x 10-1 | 406 | 388 | 290 | 289 | 51.13% | 49.91% | 794 | 579 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5229556' χ2 p-value for Mo17 x B73: '.9668506' Biased in favor of strain: '' |
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| GRMZM2G015588 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.38 x 10-8 | 298 | 122 | 235 | 127 | 70.95% | 35.08% | 420 | 362 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.86e-18' χ2 p-value for Mo17 x B73: '1.38e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G015588 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.20279 x 10-1 | 249 | 101 | 132 | 237 | 71.14% | 64.23% | 350 | 369 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0756752' χ2 p-value for Mo17 x B73: '.320279' Biased in favor of strain: '' |
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| GRMZM2G015578 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.795004 x 10-1 | 60 | 13 | 30 | 70 | 82.19% | 70.00% | 73 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0048955' χ2 p-value for Mo17 x B73: '.4795004' Biased in favor of strain: '' |
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| GRMZM2G015578 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.318624 x 10-1 | 103 | 79 | 70 | 89 | 56.59% | 55.97% | 182 | 159 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.07524' χ2 p-value for Mo17 x B73: '.1318624' Biased in favor of strain: '' |
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| GRMZM2G015571 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1105 | 315 | 916 | 274 | 77.82% | 23.03% | 1420 | 1190 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G015571 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.53 x 10-13 | 509 | 126 | 298 | 227 | 80.16% | 43.24% | 635 | 525 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.53e-13' χ2 p-value for Mo17 x B73: '4.82e-30' Biased in favor of strain: 'B73' |
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| GRMZM2G015534 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.04 x 10-12 | 8383 | 3639 | 4299 | 3390 | 69.73% | 44.09% | 12022 | 7689 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.04e-12' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G015534 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.67 x 10-6 | 657 | 229 | 361 | 248 | 74.15% | 40.72% | 886 | 609 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '4.67e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G015441 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.32 x 10-4 | 0 | 24 | 0 | 12 | 0.00% | 100.00% | 24 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.63e-07' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: 'Mo17' |
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| GRMZM2G015441 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.26 x 10-12 | 0 | 63 | 0 | 96 | 0.00% | 100.00% | 63 | 96 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.07e-29' χ2 p-value for Mo17 x B73: '4.26e-12' Biased in favor of strain: 'Mo17' |
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| GRMZM2G015432 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.45 x 10-22 | 189 | 0 | 73 | 0 | 100.00% | 0.00% | 189 | 73 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.45e-22' χ2 p-value for Mo17 x B73: '1.30e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G015432 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 235 | 0 | 205 | 0 | 100.00% | 0.00% | 235 | 205 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G015419 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.04745 x 10-1 | 125 | 152 | 169 | 284 | 45.13% | 62.69% | 277 | 453 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.104745' χ2 p-value for Mo17 x B73: '6.55e-08' Biased in favor of strain: '' |
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| GRMZM2G015419 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G015409 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.458 x 10-4 | 207 | 62 | 161 | 141 | 76.95% | 46.69% | 269 | 302 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003458' χ2 p-value for Mo17 x B73: '1.77e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G015409 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.21679 x 10-2 | 134 | 54 | 101 | 71 | 71.28% | 41.28% | 188 | 172 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.39e-09' χ2 p-value for Mo17 x B73: '.0221679' Biased in favor of strain: 'B73' |
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| GRMZM2G015406 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.585 x 10-4 | 199 | 105 | 155 | 97 | 65.46% | 38.49% | 304 | 252 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.00e-08' χ2 p-value for Mo17 x B73: '.0002585' Biased in favor of strain: 'B73' |
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| GRMZM2G015406 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.61925 x 10-2 | 5 | 7 | 7 | 5 | 41.67% | 41.67% | 12 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0661893' χ2 p-value for Mo17 x B73: '.0661925' Biased in favor of strain: '' |
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| GRMZM2G015401 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.601 x 10-4 | 95 | 19 | 81 | 40 | 83.33% | 33.06% | 114 | 121 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001601' χ2 p-value for Mo17 x B73: '4.42e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G015401 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.16 x 10-17 | 403 | 198 | 388 | 147 | 67.05% | 27.48% | 601 | 535 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.16e-17' χ2 p-value for Mo17 x B73: '2.02e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G015395 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.82 x 10-6 | 9 | 42 | 4 | 43 | 17.65% | 91.49% | 51 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.82e-06' χ2 p-value for Mo17 x B73: '1.28e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G015395 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1 | 294 | 1 | 450 | 0.34% | 99.78% | 295 | 451 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM2G015368 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 2 | 0 | 100.00% | 0.00% | 6 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G015368 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G015364 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.87 x 10-12 | 9 | 91 | 7 | 68 | 9.00% | 90.67% | 100 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.40e-16' χ2 p-value for Mo17 x B73: '1.87e-12' Biased in favor of strain: 'Mo17' |
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| GRMZM2G015364 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 6 | 138 | 1 | 297 | 4.17% | 99.66% | 144 | 298 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.29e-33' Biased in favor of strain: 'Mo17' |
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| GRMZM2G015361 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.838938 x 10-1 | 11 | 4 | 12 | 8 | 73.33% | 40.00% | 15 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5838938' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: '' |
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| GRMZM2G015361 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.28402 x 10-2 | 70 | 48 | 59 | 28 | 59.32% | 32.18% | 118 | 87 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0428402' χ2 p-value for Mo17 x B73: '.0008888' Biased in favor of strain: 'B73' |
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| GRMZM2G015344 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.5224 x 10-3 | 111 | 74 | 108 | 63 | 60.00% | 36.84% | 185 | 171 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0065224' χ2 p-value for Mo17 x B73: '.0005791' Biased in favor of strain: 'B73' |
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| GRMZM2G015344 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.042 x 10-4 | 39 | 48 | 24 | 112 | 44.83% | 82.35% | 87 | 136 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000155' χ2 p-value for Mo17 x B73: '.0001042' Biased in favor of strain: 'Mo17' |
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| GRMZM2G015324 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 2 | 4 | 3 | 80.00% | 42.86% | 10 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3710998' χ2 p-value for Mo17 x B73: '.1814491' Biased in favor of strain: '' |
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| GRMZM2G015324 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0908 x 10-3 | 18 | 3 | 20 | 4 | 85.71% | 16.67% | 21 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0010631' χ2 p-value for Mo17 x B73: '.0010908' Biased in favor of strain: 'B73' |
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| GRMZM2G015314 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 6 | 3 | 4 | 50.00% | 57.14% | 12 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G015314 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G015295 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.359 x 10-4 | 1806 | 771 | 1162 | 1775 | 70.08% | 60.44% | 2577 | 2937 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002359' χ2 p-value for Mo17 x B73: '7.88e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G015295 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.349683 x 10-1 | 5550 | 5105 | 4909 | 5005 | 52.09% | 50.48% | 10655 | 9914 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000162' χ2 p-value for Mo17 x B73: '.3349683' Biased in favor of strain: '' |
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| GRMZM2G015291 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.23434 x 10-2 | 47 | 75 | 58 | 34 | 38.52% | 36.96% | 122 | 92 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0112447' χ2 p-value for Mo17 x B73: '.0123434' Biased in favor of strain: '' |
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| GRMZM2G015291 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.8978 x 10-3 | 77 | 20 | 46 | 51 | 79.38% | 52.58% | 97 | 97 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0078978' χ2 p-value for Mo17 x B73: '.0032439' Biased in favor of strain: 'B73' |
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| GRMZM2G015289 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.23379 x 10-2 | 155 | 97 | 130 | 172 | 61.51% | 56.95% | 252 | 302 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0823379' χ2 p-value for Mo17 x B73: '.0003427' Biased in favor of strain: '' |
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| GRMZM2G015289 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.918965 x 10-1 | 196 | 171 | 192 | 159 | 53.41% | 45.30% | 367 | 351 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1918965' χ2 p-value for Mo17 x B73: '.0781691' Biased in favor of strain: '' |
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| GRMZM2G015287 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 393 | 62 | 388 | 102 | 86.37% | 20.82% | 455 | 490 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.46e-38' Biased in favor of strain: 'B73' |
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| GRMZM2G015287 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 831 | 91 | 363 | 172 | 90.13% | 32.15% | 922 | 535 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G015285 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 2 | 3 | 100.00% | 60.00% | 4 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: '' |
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| GRMZM2G015285 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 2 | 1 | 1 | 66.67% | 50.00% | 6 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G015280 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 3 | 0.00% | 100.00% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G015280 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G015277 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.22135 x 10-2 | 85 | 24 | 98 | 78 | 77.98% | 44.32% | 109 | 176 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0122135' χ2 p-value for Mo17 x B73: '3.19e-10' Biased in favor of strain: '' |
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| GRMZM2G015277 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.34 x 10-9 | 367 | 225 | 317 | 173 | 61.99% | 35.31% | 592 | 490 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.34e-09' χ2 p-value for Mo17 x B73: '7.76e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G015267 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.43409 x 10-2 | 231 | 282 | 163 | 248 | 45.03% | 60.34% | 513 | 411 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0243409' χ2 p-value for Mo17 x B73: '.0000276' Biased in favor of strain: 'Mo17' |
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| GRMZM2G015267 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.34 x 10-16 | 88 | 129 | 57 | 369 | 40.55% | 86.62% | 217 | 426 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.34e-16' χ2 p-value for Mo17 x B73: '2.41e-18' Biased in favor of strain: 'Mo17' |
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| GRMZM2G015219 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.246915 x 10-1 | 143 | 88 | 75 | 227 | 61.90% | 75.17% | 231 | 302 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1246915' χ2 p-value for Mo17 x B73: '.0017298' Biased in favor of strain: '' |
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| GRMZM2G015219 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.2183 x 10-3 | 96 | 25 | 64 | 37 | 79.34% | 36.63% | 121 | 101 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.09e-10' χ2 p-value for Mo17 x B73: '.0072183' Biased in favor of strain: 'B73' |
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| GRMZM2G015200 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.68567 x 10-2 | 62 | 24 | 27 | 13 | 72.09% | 32.50% | 86 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000417' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: 'B73' |
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| GRMZM2G015200 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.91362 x 10-2 | 39 | 11 | 21 | 13 | 78.00% | 38.24% | 50 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0891362' χ2 p-value for Mo17 x B73: '.0004368' Biased in favor of strain: '' |
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| GRMZM2G015136 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 52 | 0 | 6 | 7.14% | 100.00% | 56 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.42e-21' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G015136 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.531604 x 10-1 | 7 | 16 | 17 | 12 | 30.43% | 41.38% | 23 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0605689' χ2 p-value for Mo17 x B73: '.3531604' Biased in favor of strain: '' |
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| GRMZM2G015132 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.37 x 10-20 | 1202 | 791 | 1108 | 678 | 60.31% | 37.96% | 1993 | 1786 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.37e-20' χ2 p-value for Mo17 x B73: '2.57e-24' Biased in favor of strain: 'B73' |
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| GRMZM2G015132 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.16 x 10-6 | 580 | 182 | 464 | 694 | 76.12% | 59.93% | 762 | 1158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.15e-08' χ2 p-value for Mo17 x B73: '1.16e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G015127 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 3 | 7 | 11 | 62.50% | 61.11% | 8 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8025764' χ2 p-value for Mo17 x B73: '.6170749' Biased in favor of strain: '' |
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| GRMZM2G015127 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630246 x 10-1 | 13 | 8 | 5 | 6 | 61.90% | 54.55% | 21 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2752335' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: '' |
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| GRMZM2G015126 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.275648 x 10-1 | 103 | 67 | 61 | 60 | 60.59% | 49.59% | 170 | 121 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0057612' χ2 p-value for Mo17 x B73: '.9275648' Biased in favor of strain: '' |
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| GRMZM2G015126 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.801856 x 10-1 | 15 | 7 | 18 | 12 | 68.18% | 40.00% | 22 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8801856' χ2 p-value for Mo17 x B73: '.0019458' Biased in favor of strain: '' |
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| GRMZM2G015100 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.57 x 10-17 | 1494 | 481 | 930 | 1149 | 75.65% | 55.27% | 1975 | 2079 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.57e-17' χ2 p-value for Mo17 x B73: '2.86e-28' Biased in favor of strain: 'B73' |
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| GRMZM2G015100 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.48 x 10-11 | 1204 | 679 | 881 | 624 | 63.94% | 41.46% | 1883 | 1505 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.07e-33' χ2 p-value for Mo17 x B73: '3.48e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G015080 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1051 | 432 | 1284 | 474 | 70.87% | 26.96% | 1483 | 1758 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G015080 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.680992 x 10-1 | 16 | 7 | 0 | 32 | 69.57% | 100.00% | 23 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7680992' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: '' |
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| GRMZM2G015073 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.22 x 10-12 | 1606 | 573 | 1111 | 1514 | 73.70% | 57.68% | 2179 | 2625 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.22e-12' χ2 p-value for Mo17 x B73: '1.49e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G015073 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2339 | 1551 | 2098 | 1358 | 60.13% | 39.29% | 3890 | 3456 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.37e-36' χ2 p-value for Mo17 x B73: '2.47e-36' Biased in favor of strain: 'B73' |
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| GRMZM2G015067 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.427817 x 10-1 | 24 | 16 | 23 | 17 | 60.00% | 42.50% | 40 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.3427817' Biased in favor of strain: '' |
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| GRMZM2G015067 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.99984 x 10-1 | 8 | 4 | 16 | 10 | 66.67% | 38.46% | 12 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999984' χ2 p-value for Mo17 x B73: '.0022819' Biased in favor of strain: '' |
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| GRMZM2G015049 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G015049 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.48085 x 10-2 | 10 | 0 | 9 | 2 | 100.00% | 18.18% | 10 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: 'B73' |