Displaying data sets 33301 - 33400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G10250 DOT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G10250 DOT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G10250 DOT3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G10250 DOT3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10250 DOT3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10250 DOT3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10240 ASN3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 5 3 10 50.00% 76.92% 10 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.248952'
Avg. expression score for this sample: '36.9512'
Avg. expression score in LCM sample: '16.0354'
Tissue used: 'pure endosperm, no chalazal'
AT5G10240 ASN3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.32494 x 10-1 22 8 6 27 73.33% 81.82% 30 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.248952'
Avg. expression score for this sample: '49.9635'
Avg. expression score in LCM sample: '16.0354'
Tissue used: 'full endosperm'
AT5G10240 ASN3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.11392 x 10-1 9 20 1 2 31.03% 66.67% 29 3 TAIR8 Avg. embryo expression (dissected): '119.488'
Avg. embryo expression (LCM): '148.882'
AT5G10240 ASN3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.68505 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10240 ASN3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.87921 x 10-1 25 13 65.79% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10240 ASN3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1836 x 10-2 11 12 47.83% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10235 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G10235 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G10235 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G10235 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10235 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10235 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10230 ANNAT7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.94684 x 10-1 51 35 11 27 59.30% 71.05% 86 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.48537'
Avg. expression score for this sample: '106.439'
Avg. expression score in LCM sample: '512.928'
Tissue used: 'pure endosperm, no chalazal'
AT5G10230 ANNAT7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.29563 x 10-1 0 4 11 22 0.00% 66.67% 4 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.48537'
Avg. expression score for this sample: '26.0228'
Avg. expression score in LCM sample: '512.928'
Tissue used: 'full endosperm'
AT5G10230 ANNAT7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '6.58033'
Avg. embryo expression (LCM): '15.0075'
AT5G10230 ANNAT7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.82716 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10230 ANNAT7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2732 x 10-2 2493 2301 52.00% 4794 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10230 ANNAT7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.8 x 10-6 1422 388 78.56% 1810 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10220 ANN6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 51 24 46 92 68.00% 66.67% 75 138 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.881763'
Avg. expression score for this sample: '615.249'
Avg. expression score in LCM sample: '613.961'
Tissue used: 'pure endosperm, no chalazal'
AT5G10220 ANN6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.46937 x 10-1 38 10 58 85 79.17% 59.44% 48 143 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.881763'
Avg. expression score for this sample: '220.578'
Avg. expression score in LCM sample: '613.961'
Tissue used: 'full endosperm'
AT5G10220 ANN6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 2 1 0 60.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '30.8069'
Avg. embryo expression (LCM): '1.13027'
AT5G10220 ANN6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.55234 x 10-1 12 2 85.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10220 ANN6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.07622 x 10-1 1280 709 64.35% 1989 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10220 ANN6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.89254 x 10-1 774 340 69.48% 1114 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '254.809'
Avg. expression score in LCM sample: '208.078'
Tissue used: 'pure endosperm, no chalazal'
AT5G10210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '80.961'
Avg. expression score in LCM sample: '208.078'
Tissue used: 'full endosperm'
AT5G10210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '10.2769'
Avg. embryo expression (LCM): '1.25586'
AT5G10210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.42174 x 10-1 102 70 74 180 59.30% 70.87% 172 254 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '766.161'
Avg. expression score in LCM sample: '204.036'
Tissue used: 'pure endosperm, no chalazal'
AT5G10200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.47735 x 10-1 140 85 88 212 62.22% 70.67% 225 300 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '432.297'
Avg. expression score in LCM sample: '204.036'
Tissue used: 'full endosperm'
AT5G10200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.81221 x 10-1 81 84 9 35 49.09% 79.55% 165 44 TAIR8 Avg. embryo expression (dissected): '425.263'
Avg. embryo expression (LCM): '210.306'
AT5G10200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.61227 x 10-1 12 2 85.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.22787 x 10-1 22 7 75.86% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.251 x 10-3 70 16 81.40% 86 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.30769 x 10-1 4 0 0 3 100.00% 100.00% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.022609'
Avg. expression score for this sample: '2.34864'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G10190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.5449 x 10-2 7 1 0 9 87.50% 100.00% 8 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.022609'
Avg. expression score for this sample: '7.40146'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G10190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.69286'
Avg. embryo expression (LCM): '0'
AT5G10190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.21 x 10-4 11 11 50.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 26 2 92.86% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10180 SULTR2;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.8 x 10-11 85 0 0 4 100.00% 100.00% 85 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.7e-25'
Avg. expression score for this sample: '9.91226'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G10180 SULTR2;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.7 x 10-15 133 3 0 27 97.79% 100.00% 136 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.7e-25'
Avg. expression score for this sample: '15.4112'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G10180 SULTR2;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 2.14286 x 10-1 4 0 0 0 100.00% 4 0 TAIR8 Avg. embryo expression (dissected): '.48246'
Avg. embryo expression (LCM): '2.08472'
AT5G10180 SULTR2;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 37 0 100.00% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10180 SULTR2;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 64 1 98.46% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10180 SULTR2;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.5903 x 10-1 1931 22 98.87% 1953 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10170 MIPS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 3 0 2 40.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.778716'
Avg. expression score for this sample: '8.4163'
Avg. expression score in LCM sample: '19.607'
Tissue used: 'pure endosperm, no chalazal'
AT5G10170 MIPS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.13633 x 10-1 4 5 0 14 44.44% 100.00% 9 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.778716'
Avg. expression score for this sample: '12.556'
Avg. expression score in LCM sample: '19.607'
Tissue used: 'full endosperm'
AT5G10170 MIPS3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.15524 x 10-1 26 6 11 4 81.25% 26.67% 32 15 TAIR8 Avg. embryo expression (dissected): '52.944'
Avg. embryo expression (LCM): '87.7845'
AT5G10170 MIPS3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.50317 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10170 MIPS3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.54888 x 10-1 532 266 66.67% 798 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10170 MIPS3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.39289 x 10-1 855 484 63.85% 1339 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.50223 x 10-1 553 309 226 478 64.15% 67.90% 862 704 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153232'
Avg. expression score for this sample: '1633.35'
Avg. expression score in LCM sample: '588.255'
Tissue used: 'pure endosperm, no chalazal'
AT5G10160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.28921 x 10-1 411 196 383 620 67.71% 61.81% 607 1003 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153232'
Avg. expression score for this sample: '880.55'
Avg. expression score in LCM sample: '588.255'
Tissue used: 'full endosperm'
AT5G10160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.88636 x 10-1 1162 1253 158 183 48.12% 53.67% 2415 341 TAIR8 Avg. embryo expression (dissected): '3545.59'
Avg. embryo expression (LCM): '3115.44'
AT5G10160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.2867 x 10-1 92 51 64.34% 143 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7194 x 10-2 111 38 74.50% 149 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.7 x 10-9 127 19 86.99% 146 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.635117'
Avg. expression score for this sample: '3.16381'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G10150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.23077 x 10-1 2 0 1 5 100.00% 83.33% 2 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.635117'
Avg. expression score for this sample: '3.34831'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G10150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.36531 x 10-1 11 15 5 4 42.31% 44.44% 26 9 TAIR8 Avg. embryo expression (dissected): '40.3434'
Avg. embryo expression (LCM): '69.4866'
AT5G10150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10140 FLC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 4 0 100.00% 0.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.577234'
Avg. expression score for this sample: '71.4551'
Avg. expression score in LCM sample: '14.3746'
Tissue used: 'pure endosperm, no chalazal'
AT5G10140 FLC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.37428 x 10-1 8 2 6 3 80.00% 33.33% 10 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.577234'
Avg. expression score for this sample: '71.8813'
Avg. expression score in LCM sample: '14.3746'
Tissue used: 'full endosperm'
AT5G10140 FLC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.82051 x 10-1 1 2 4 0 33.33% 0.00% 3 4 TAIR8 Avg. embryo expression (dissected): '68.1558'
Avg. embryo expression (LCM): '10.926'
AT5G10140 FLC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.64286 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10140 FLC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.64286 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10140 FLC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.49889'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G10130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 1 1 0 75.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.86986'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G10130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.4223'
Avg. embryo expression (LCM): '4.45829'
AT5G10130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 5 0 1 2 100.00% 66.67% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.671812'
Avg. expression score for this sample: '8.23835'
Avg. expression score in LCM sample: '4.15951'
Tissue used: 'pure endosperm, no chalazal'
AT5G10120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.5879 x 10-1 12 5 13 10 70.59% 43.48% 17 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.671812'
Avg. expression score for this sample: '32.4602'
Avg. expression score in LCM sample: '4.15951'
Tissue used: 'full endosperm'
AT5G10120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.526104'
Avg. embryo expression (LCM): '0'
AT5G10120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 5 61.54% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1388 x 10-2 49 5 90.74% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.33684 x 10-1 18 6 5 13 75.00% 72.22% 24 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.425376'
Avg. expression score for this sample: '101.032'
Avg. expression score in LCM sample: '73.5925'
Tissue used: 'pure endosperm, no chalazal'
AT5G10110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.68502 x 10-1 15 2 12 23 88.24% 65.71% 17 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.425376'
Avg. expression score for this sample: '135.174'
Avg. expression score in LCM sample: '73.5925'
Tissue used: 'full endosperm'
AT5G10110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.58973 x 10-1 20 18 6 16 52.63% 72.73% 38 22 TAIR8 Avg. embryo expression (dissected): '128.922'
Avg. embryo expression (LCM): '116.393'
AT5G10110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33307 x 10-1 25 5 83.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10100 TPPI endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10100 TPPI endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.1481'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G10100 TPPI endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.6858'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G10100 TPPI embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '10.6707'
Avg. embryo expression (LCM): '8.90403'