| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G10860 | CBSX3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.9143 x 10-2 | 44 | 73 | 4 | 5 | 37.61% | 55.56% | 117 | 9 | TAIR8 |
Avg. embryo expression (dissected): '1243.47' Avg. embryo expression (LCM): '729.603' |
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| AT5G10860 | CBSX3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.3 x 10-4 | 125 | 14 | 89.93% | 139 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G10860 | CBSX3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.0 x 10-9 | 112 | 3 | 97.39% | 115 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G10860 | CBSX3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.4998 x 10-2 | 73 | 11 | 86.90% | 84 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G10840 | EMP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.76466 x 10-1 | 13 | 13 | 2 | 26 | 50.00% | 92.86% | 26 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.329892' Avg. expression score for this sample: '261.058' Avg. expression score in LCM sample: '247.043' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10840 | EMP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.53659 x 10-1 | 24 | 17 | 12 | 52 | 58.54% | 81.25% | 41 | 64 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.329892' Avg. expression score for this sample: '319.805' Avg. expression score in LCM sample: '247.043' Tissue used: 'full endosperm' |
||||
| AT5G10840 | EMP1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.31799 x 10-1 | 8 | 21 | 3 | 4 | 27.59% | 57.14% | 29 | 7 | TAIR8 |
Avg. embryo expression (dissected): '298.182' Avg. embryo expression (LCM): '190.363' |
|||
| AT5G10840 | EMP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.9706 x 10-1 | 16 | 4 | 80.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G10840 | EMP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.4219 x 10-2 | 69 | 13 | 84.15% | 82 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G10840 | EMP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.1 x 10-8 | 70 | 0 | 100.00% | 70 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G10830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.54545 x 10-1 | 4 | 0 | 0 | 2 | 100.00% | 100.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.635117' Avg. expression score for this sample: '51.8996' Avg. expression score in LCM sample: '3.26294' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G10830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 1 | 3 | 0.00% | 75.00% | 1 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.635117' Avg. expression score for this sample: '105.296' Avg. expression score in LCM sample: '3.26294' Tissue used: 'full endosperm' |
|||||
| AT5G10830 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.37186 x 10-1 | 4 | 2 | 1 | 2 | 66.67% | 66.67% | 6 | 3 | TAIR8 |
Avg. embryo expression (dissected): '49.9921' Avg. embryo expression (LCM): '23.7232' |
||||
| AT5G10830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.23077 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.8538 x 10-1 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10830 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1828 x 10-1 | 20 | 0 | 100.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 6 | 1 | 3 | 5 | 85.71% | 62.50% | 7 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '110.468' Avg. expression score in LCM sample: '66.5669' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G10820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 6 | 7 | 1 | 10 | 46.15% | 90.91% | 13 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '115.059' Avg. expression score in LCM sample: '66.5669' Tissue used: 'full endosperm' |
|||||
| AT5G10820 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 3 | 0 | 0 | 50.00% | 6 | 0 | TAIR8 |
Avg. embryo expression (dissected): '100.571' Avg. embryo expression (LCM): '53.7507' |
|||||
| AT5G10820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.325 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.12528 x 10-1 | 14 | 3 | 82.35% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10820 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.983 x 10-3 | 25 | 0 | 100.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10810 | ER | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '66.5375' Avg. expression score in LCM sample: '53.1477' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT5G10810 | ER | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '115.819' Avg. expression score in LCM sample: '53.1477' Tissue used: 'full endosperm' |
||||||
| AT5G10810 | ER | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '67.1734' Avg. embryo expression (LCM): '197.459' |
|||||
| AT5G10810 | ER | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10810 | ER | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10810 | ER | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 1 | 0 | 1 | 75.00% | 100.00% | 4 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.665814' Avg. expression score for this sample: '46.8705' Avg. expression score in LCM sample: '5.74688' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.20169 x 10-1 | 13 | 7 | 6 | 19 | 65.00% | 76.00% | 20 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.665814' Avg. expression score for this sample: '40.4632' Avg. expression score in LCM sample: '5.74688' Tissue used: 'full endosperm' |
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| AT5G10800 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.81818 x 10-1 | 0 | 6 | 0 | 0 | 0.00% | 6 | 0 | TAIR8 |
Avg. embryo expression (dissected): '56.3226' Avg. embryo expression (LCM): '39.6725' |
|||||
| AT5G10800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.5732 | 2 | 2 | 50.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.6217 | 3 | 2 | 60.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10800 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 1 | 83.33% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10790 | UBP22 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '73.809' Avg. expression score in LCM sample: '39.846' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10790 | UBP22 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '58.561' Avg. expression score in LCM sample: '39.846' Tissue used: 'full endosperm' |
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| AT5G10790 | UBP22 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '96.9283' Avg. embryo expression (LCM): '81.0405' |
|||||
| AT5G10790 | UBP22 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10790 | UBP22 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10790 | UBP22 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 2 | 1 | 1 | 33.33% | 50.00% | 3 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.665814' Avg. expression score for this sample: '126.156' Avg. expression score in LCM sample: '133.486' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.85824 x 10-1 | 13 | 4 | 7 | 21 | 76.47% | 75.00% | 17 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.665814' Avg. expression score for this sample: '158.394' Avg. expression score in LCM sample: '133.486' Tissue used: 'full endosperm' |
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| AT5G10780 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.45455 x 10-1 | 4 | 1 | 0 | 1 | 80.00% | 100.00% | 5 | 1 | TAIR8 |
Avg. embryo expression (dissected): '146.631' Avg. embryo expression (LCM): '177.415' |
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| AT5G10780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.68481 x 10-1 | 50 | 12 | 80.65% | 62 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10780 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.99277 x 10-1 | 45 | 12 | 78.95% | 57 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000384' Avg. expression score for this sample: '9.23424' Avg. expression score in LCM sample: '.837781' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.823 x 10-3 | 22 | 0 | 0 | 6 | 100.00% | 100.00% | 22 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000384' Avg. expression score for this sample: '48.0843' Avg. expression score in LCM sample: '.837781' Tissue used: 'full endosperm' |
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| AT5G10770 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '14.6983' Avg. embryo expression (LCM): '3.56664' |
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| AT5G10770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10770 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 293 | 1 | 99.66% | 294 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.14536' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.615402' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G10760 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.164581' Avg. embryo expression (LCM): '0' |
||||||
| AT5G10760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G10760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G10760 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.15438 x 10-1 | 9 | 2 | 12 | 11 | 81.82% | 47.83% | 11 | 23 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '193.527' Avg. expression score in LCM sample: '26.8384' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.87875 x 10-1 | 7 | 2 | 7 | 16 | 77.78% | 69.57% | 9 | 23 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '96.1544' Avg. expression score in LCM sample: '26.8384' Tissue used: 'full endosperm' |
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| AT5G10750 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.37688 x 10-1 | 7 | 5 | 1 | 5 | 58.33% | 83.33% | 12 | 6 | TAIR8 |
Avg. embryo expression (dissected): '143.331' Avg. embryo expression (LCM): '68.7833' |
||||
| AT5G10750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 13 | 7 | 65.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10750 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.5595 x 10-2 | 30 | 5 | 85.71% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10745 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.30485 x 10-1 | 27 | 1 | 14 | 8 | 96.43% | 36.36% | 28 | 22 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.048314' Avg. expression score for this sample: '45.2623' Avg. expression score in LCM sample: '20.1214' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10745 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.0795 x 10-2 | 97 | 8 | 26 | 22 | 92.38% | 45.83% | 105 | 48 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.048314' Avg. expression score for this sample: '101.753' Avg. expression score in LCM sample: '20.1214' Tissue used: 'full endosperm' |
|||||
| AT5G10745 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.6047 x 10-2 | 24 | 3 | 4 | 0 | 88.89% | 0.00% | 27 | 4 | TAIR8 |
Avg. embryo expression (dissected): '32.3725' Avg. embryo expression (LCM): '38.0023' |
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| AT5G10745 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.7028 x 10-1 | 6 | 4 | 60.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10745 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.742 x 10-3 | 16 | 17 | 48.48% | 33 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10745 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.2 x 10-7 | 68 | 0 | 100.00% | 68 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '50.0654' Avg. expression score in LCM sample: '18.2695' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '102.574' Avg. expression score in LCM sample: '18.2695' Tissue used: 'full endosperm' |
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| AT5G10740 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '38.1227' Avg. embryo expression (LCM): '12.3325' |
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| AT5G10740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G10740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G10740 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G10730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '29.2221' Avg. expression score in LCM sample: '30.6892' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '32.9604' Avg. expression score in LCM sample: '30.6892' Tissue used: 'full endosperm' |
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| AT5G10730 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '36.4957' Avg. embryo expression (LCM): '33.9961' |
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| AT5G10730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G10730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 2 | 66.67% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10730 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10720 | HK5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.69644' Avg. expression score in LCM sample: '.896573' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10720 | HK5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 6 | 4 | 3 | 6 | 60.00% | 66.67% | 10 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '18.2026' Avg. expression score in LCM sample: '.896573' Tissue used: 'full endosperm' |
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| AT5G10720 | HK5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 4 | 4 | 1 | 2 | 50.00% | 66.67% | 8 | 3 | TAIR8 |
Avg. embryo expression (dissected): '38.7996' Avg. embryo expression (LCM): '34.8626' |
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| AT5G10720 | HK5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10720 | HK5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.09091 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G10720 | HK5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.2785 x 10-1 | 5 | 1 | 83.33% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G10710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.40405 x 10-1 | 0 | 2 | 0 | 10 | 0.00% | 100.00% | 2 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.050056' Avg. expression score for this sample: '29.3852' Avg. expression score in LCM sample: '16.3735' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.8117 x 10-2 | 19 | 6 | 4 | 29 | 76.00% | 87.88% | 25 | 33 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.050056' Avg. expression score for this sample: '32.6529' Avg. expression score in LCM sample: '16.3735' Tissue used: 'full endosperm' |
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| AT5G10710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.99792 x 10-1 | 2 | 12 | 0 | 4 | 14.29% | 100.00% | 14 | 4 | TAIR8 |
Avg. embryo expression (dissected): '36.1372' Avg. embryo expression (LCM): '20.9854' |
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| AT5G10710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.8149 x 10-1 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.78964 x 10-1 | 29 | 3 | 90.62% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.1872 x 10-1 | 28 | 10 | 73.68% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G10700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '30.14' Avg. expression score in LCM sample: '17.1525' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G10700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '87.5329' Avg. expression score in LCM sample: '17.1525' Tissue used: 'full endosperm' |
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| AT5G10700 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '40.8068' Avg. embryo expression (LCM): '35.5784' |
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| AT5G10700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G10700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G10700 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |