| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G475897 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.316006 x 10-1 | 12 | 26 | 18 | 16 | 31.58% | 47.06% | 38 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0231409' χ2 p-value for Mo17 x B73: '.7316006' Biased in favor of strain: '' |
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| GRMZM2G475897 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 4 | 4 | 40.00% | 50.00% | 5 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2058979' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: '' |
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| GRMZM2G475882 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.082937 x 10-1 | 94 | 121 | 75 | 96 | 43.72% | 56.14% | 215 | 171 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0655652' χ2 p-value for Mo17 x B73: '.1082937' Biased in favor of strain: '' |
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| GRMZM2G475882 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.206715 x 10-1 | 16 | 37 | 20 | 55 | 30.19% | 73.33% | 53 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.77e-08' χ2 p-value for Mo17 x B73: '.2206715' Biased in favor of strain: '' |
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| GRMZM2G475702 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.16 x 10-4 | 140 | 77 | 124 | 77 | 64.52% | 38.31% | 217 | 201 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000019' χ2 p-value for Mo17 x B73: '.000916' Biased in favor of strain: 'B73' |
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| GRMZM2G475702 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.43429 x 10-1 | 6 | 7 | 6 | 15 | 46.15% | 71.43% | 13 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1166593' χ2 p-value for Mo17 x B73: '.643429' Biased in favor of strain: '' |
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| GRMZM2G475673 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 3 | 0 | 33.33% | 0.00% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G475673 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G475647 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.049851 x 10-1 | 26 | 17 | 20 | 16 | 60.47% | 44.44% | 43 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1699118' χ2 p-value for Mo17 x B73: '.5049851' Biased in favor of strain: '' |
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| GRMZM2G475647 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.070257 x 10-1 | 6 | 10 | 9 | 29 | 37.50% | 76.32% | 16 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0133273' χ2 p-value for Mo17 x B73: '.2070257' Biased in favor of strain: '' |
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| GRMZM2G475504 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.630244 x 10-1 | 69 | 45 | 43 | 31 | 60.53% | 41.89% | 114 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0245886' χ2 p-value for Mo17 x B73: '.1630244' Biased in favor of strain: '' |
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| GRMZM2G475504 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.026055 x 10-1 | 65 | 24 | 34 | 50 | 73.03% | 59.52% | 89 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2026055' χ2 p-value for Mo17 x B73: '.1649147' Biased in favor of strain: '' |
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| GRMZM2G475495 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.882425 x 10-1 | 331 | 298 | 363 | 302 | 52.62% | 45.41% | 629 | 665 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1882425' χ2 p-value for Mo17 x B73: '.0180068' Biased in favor of strain: '' |
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| GRMZM2G475495 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.96683 x 10-2 | 384 | 255 | 283 | 481 | 60.09% | 62.96% | 639 | 764 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000424' χ2 p-value for Mo17 x B73: '.0296683' Biased in favor of strain: '' |
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| GRMZM2G475380 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.219908 x 10-1 | 538 | 506 | 333 | 232 | 51.53% | 41.06% | 1044 | 565 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3219908' χ2 p-value for Mo17 x B73: '.0000215' Biased in favor of strain: '' |
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| GRMZM2G475380 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.373743 x 10-1 | 169 | 99 | 58 | 99 | 63.06% | 63.06% | 268 | 157 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2103182' χ2 p-value for Mo17 x B73: '.3373743' Biased in favor of strain: '' |
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| GRMZM2G475362 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.97 x 10-18 | 138 | 12 | 93 | 7 | 92.00% | 7.00% | 150 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.99e-25' χ2 p-value for Mo17 x B73: '7.97e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G475362 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 1 | 5 | 0 | 87.50% | 0.00% | 8 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2113029' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G475360 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.28 x 10-18 | 662 | 358 | 625 | 350 | 64.90% | 35.90% | 1020 | 975 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.76e-21' χ2 p-value for Mo17 x B73: '1.28e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G475360 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.608 x 10-4 | 866 | 348 | 401 | 558 | 71.33% | 58.19% | 1214 | 959 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005608' χ2 p-value for Mo17 x B73: '2.53e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G475305 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.06 x 10-6 | 287 | 189 | 347 | 201 | 60.29% | 36.68% | 476 | 548 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.06e-06' χ2 p-value for Mo17 x B73: '4.47e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G475305 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 5.82 x 10-27 | 30 | 125 | 128 | 52 | 19.35% | 28.89% | 155 | 180 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.92e-36' χ2 p-value for Mo17 x B73: '5.82e-27' Biased in favor of strain: '' |
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| GRMZM2G475296 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G475296 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G475293 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.47 x 10-12 | 842 | 1151 | 623 | 1215 | 42.25% | 66.10% | 1993 | 1838 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.47e-12' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM2G475293 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0508 x 10-3 | 3057 | 1359 | 1421 | 2550 | 69.23% | 64.22% | 4416 | 3971 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003099' χ2 p-value for Mo17 x B73: '.0010508' Biased in favor of strain: 'B73' |
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| GRMZM2G475289 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 3 | 0 | 50.00% | 0.00% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G475289 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G475265 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 0 | 196 | 0 | 135 | 0.00% | 100.00% | 196 | 135 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.30e-31' Biased in favor of strain: 'Mo17' |
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| GRMZM2G475265 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.17 x 10-7 | 0 | 50 | 1 | 61 | 0.00% | 98.39% | 50 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.52e-23' χ2 p-value for Mo17 x B73: '1.17e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G475263 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.024639 x 10-1 | 686 | 429 | 388 | 395 | 61.52% | 50.45% | 1115 | 783 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.40e-14' χ2 p-value for Mo17 x B73: '.8024639' Biased in favor of strain: '' |
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| GRMZM2G475263 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.08 x 10-9 | 2027 | 796 | 1139 | 1576 | 71.80% | 58.05% | 2823 | 2715 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.08e-09' χ2 p-value for Mo17 x B73: '1.63e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G475197 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 3 | 2 | 100.00% | 40.00% | 2 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G475197 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G475148 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.482131 x 10-1 | 8 | 4 | 14 | 1 | 66.67% | 6.67% | 12 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2482131' χ2 p-value for Mo17 x B73: '.0007891' Biased in favor of strain: '' |
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| GRMZM2G475148 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 0 | 0 | 33.33% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G475059 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.43059 x 10-2 | 31 | 7 | 36 | 18 | 81.58% | 33.33% | 38 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000989' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: 'B73' |
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| GRMZM2G475059 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.272724 x 10-1 | 64 | 22 | 163 | 212 | 74.42% | 56.53% | 86 | 375 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1272724' χ2 p-value for Mo17 x B73: '.0000315' Biased in favor of strain: '' |
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| GRMZM2G475017 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.130677 x 10-1 | 48 | 61 | 44 | 67 | 44.04% | 60.36% | 109 | 111 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2130677' χ2 p-value for Mo17 x B73: '.0290311' Biased in favor of strain: '' |
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| GRMZM2G475017 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.903647 x 10-1 | 23 | 25 | 31 | 51 | 47.92% | 62.20% | 48 | 82 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0058563' χ2 p-value for Mo17 x B73: '.3903647' Biased in favor of strain: '' |
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| GRMZM2G474798 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.41556 x 10-2 | 306 | 210 | 228 | 187 | 59.30% | 45.06% | 516 | 415 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000238' χ2 p-value for Mo17 x B73: '.0441556' Biased in favor of strain: 'B73' |
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| GRMZM2G474798 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.41 x 10-11 | 456 | 118 | 350 | 394 | 79.44% | 52.96% | 574 | 744 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.41e-11' χ2 p-value for Mo17 x B73: '2.14e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G474783 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 2 | 0 | 0.00% | 0.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G474783 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 6 | 100.00% | 85.71% | 2 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: '' |
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| GRMZM2G474777 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 15 | 0 | 3 | 0 | 100.00% | 0.00% | 15 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G474777 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G474755 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.104047 x 10-1 | 95 | 90 | 137 | 141 | 51.35% | 50.72% | 185 | 278 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7131661' χ2 p-value for Mo17 x B73: '.8104047' Biased in favor of strain: '' |
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| GRMZM2G474755 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G474726 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.00973 x 10-2 | 83 | 53 | 91 | 33 | 61.03% | 26.61% | 136 | 124 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0100973' χ2 p-value for Mo17 x B73: '1.90e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G474726 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.394979 x 10-1 | 128 | 32 | 31 | 54 | 80.00% | 63.53% | 160 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003467' χ2 p-value for Mo17 x B73: '.5394979' Biased in favor of strain: '' |
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| GRMZM2G474685 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 58 | 61 | 78 | 78 | 48.74% | 50.00% | 119 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7833089' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G474685 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.157353 x 10-1 | 21 | 15 | 17 | 41 | 58.33% | 70.69% | 36 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2888298' χ2 p-value for Mo17 x B73: '.5157353' Biased in favor of strain: '' |
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| GRMZM2G474658 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.07011 x 10-2 | 4 | 13 | 11 | 4 | 23.53% | 26.67% | 17 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.029049' χ2 p-value for Mo17 x B73: '.0707011' Biased in favor of strain: '' |
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| GRMZM2G474658 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999998 x 10-1 | 9 | 2 | 4 | 8 | 81.82% | 66.67% | 11 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2864275' χ2 p-value for Mo17 x B73: '.9999998' Biased in favor of strain: '' |
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| GRMZM2G474656 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 5 | 0.00% | 100.00% | 3 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G474656 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 11 | 0.00% | 100.00% | 3 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.0190165' Biased in favor of strain: '' |
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| GRMZM2G474651 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 5 | 10 | 2 | 37.50% | 16.67% | 8 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.0209213' Biased in favor of strain: '' |
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| GRMZM2G474651 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G474575 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.68 x 10-15 | 41 | 149 | 57 | 261 | 21.58% | 82.08% | 190 | 318 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.68e-15' χ2 p-value for Mo17 x B73: '2.65e-30' Biased in favor of strain: 'Mo17' |
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| GRMZM2G474575 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.29066 x 10-2 | 297 | 727 | 679 | 1523 | 29.00% | 69.16% | 1024 | 2202 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0129066' Biased in favor of strain: '' |
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| GRMZM2G474555 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.691714 x 10-1 | 7 | 14 | 13 | 18 | 33.33% | 58.06% | 21 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1266305' χ2 p-value for Mo17 x B73: '.3691714' Biased in favor of strain: '' |
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| GRMZM2G474555 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 1 | 5 | 66.67% | 83.33% | 3 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.3864763' Biased in favor of strain: '' |
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| GRMZM2G474546 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 404 | 99 | 342 | 95 | 80.32% | 21.74% | 503 | 437 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.24e-32' Biased in favor of strain: 'B73' |
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| GRMZM2G474546 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.54 x 10-25 | 333 | 27 | 136 | 36 | 92.50% | 20.93% | 360 | 172 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.54e-25' χ2 p-value for Mo17 x B73: '4.34e-37' Biased in favor of strain: 'B73' |
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| GRMZM2G474537 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.88145 x 10-2 | 56 | 37 | 54 | 32 | 60.22% | 37.21% | 93 | 86 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0488145' χ2 p-value for Mo17 x B73: '.0176767' Biased in favor of strain: 'B73' |
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| GRMZM2G474537 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.880878 x 10-1 | 19 | 7 | 6 | 7 | 73.08% | 53.85% | 26 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4880878' χ2 p-value for Mo17 x B73: '.3267995' Biased in favor of strain: '' |
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| GRMZM2G474531 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.560402 x 10-1 | 181 | 139 | 132 | 127 | 56.56% | 49.03% | 320 | 259 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.018881' χ2 p-value for Mo17 x B73: '.7560402' Biased in favor of strain: '' |
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| GRMZM2G474531 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.42 x 10-19 | 416 | 69 | 260 | 153 | 85.77% | 37.05% | 485 | 413 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.42e-19' χ2 p-value for Mo17 x B73: '2.43e-37' Biased in favor of strain: 'B73' |
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| GRMZM2G474462 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.9049 x 10-2 | 13 | 4 | 13 | 3 | 76.47% | 18.75% | 17 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.029049' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: 'B73' |
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| GRMZM2G474462 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 2 | 2 | 100.00% | 50.00% | 10 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G474407 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.07 x 10-14 | 76 | 6 | 99 | 6 | 92.68% | 5.71% | 82 | 105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.07e-14' χ2 p-value for Mo17 x B73: '1.13e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G474407 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G474326 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 5 | 7 | 4 | 16.67% | 36.36% | 6 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: '' |
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| GRMZM2G474326 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 1 | 100.00% | 33.33% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM2G474258 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630246 x 10-1 | 6 | 8 | 6 | 5 | 42.86% | 45.45% | 14 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: '' |
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| GRMZM2G474258 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 2 | 0 | 4 | 85.71% | 100.00% | 14 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1305732' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G474236 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.2543 x 10-3 | 115 | 71 | 110 | 66 | 61.83% | 37.50% | 186 | 176 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0012543' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: 'B73' |
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| GRMZM2G474236 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.767882 x 10-1 | 101 | 43 | 89 | 58 | 70.14% | 39.46% | 144 | 147 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3767882' χ2 p-value for Mo17 x B73: '2.59e-12' Biased in favor of strain: '' |
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| GRMZM2G474194 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.55 x 10-21 | 1226 | 756 | 1307 | 863 | 61.86% | 39.77% | 1982 | 2170 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.71e-26' χ2 p-value for Mo17 x B73: '1.55e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G474194 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 9.4442 x 10-3 | 111 | 0 | 1 | 18 | 100.00% | 94.74% | 111 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.35e-14' χ2 p-value for Mo17 x B73: '.0094442' Biased in favor of strain: '' |
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| GRMZM2G474119 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0 x 10-5 | 143 | 35 | 236 | 152 | 80.34% | 39.18% | 178 | 388 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.73e-16' χ2 p-value for Mo17 x B73: '.00002' Biased in favor of strain: 'B73' |
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| GRMZM2G474119 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.94 x 10-10 | 235 | 45 | 166 | 142 | 83.93% | 46.10% | 280 | 308 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.94e-10' χ2 p-value for Mo17 x B73: '1.93e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G474113 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 17 | 0 | 0 | 1 | 100.00% | 100.00% | 17 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000374' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G474113 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.0405 x 10-3 | 29 | 3 | 20 | 5 | 90.62% | 20.00% | 32 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0040405' χ2 p-value for Mo17 x B73: '7.43e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G474088 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 8 | 0 | 100.00% | 0.00% | 6 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G474088 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 4 | 6 | 0 | 75.00% | 0.00% | 16 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795104' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM2G474039 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 8 | 6 | 5 | 0.00% | 45.45% | 8 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: '' |
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| GRMZM2G474039 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.864275 x 10-1 | 9 | 2 | 3 | 17 | 81.82% | 85.00% | 11 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2864275' χ2 p-value for Mo17 x B73: '.0819903' Biased in favor of strain: '' |
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| GRMZM2G473925 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 2 | 0 | 50.00% | 0.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G473925 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G473906 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.2705 x 10-2 | 186 | 145 | 171 | 137 | 56.19% | 44.48% | 331 | 308 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0242236' χ2 p-value for Mo17 x B73: '.052705' Biased in favor of strain: '' |
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| GRMZM2G473906 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.088093 x 10-1 | 25 | 6 | 27 | 36 | 80.65% | 57.14% | 31 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0987425' χ2 p-value for Mo17 x B73: '.1088093' Biased in favor of strain: '' |
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| GRMZM2G473788 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2541 | 1272 | 2501 | 1320 | 66.64% | 34.55% | 3813 | 3821 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G473788 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.09 x 10-17 | 1253 | 387 | 663 | 687 | 76.40% | 50.89% | 1640 | 1350 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.09e-17' χ2 p-value for Mo17 x B73: '9.33e-35' Biased in favor of strain: 'B73' |
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| GRMZM2G473743 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 3 | 7 | 0.00% | 70.00% | 2 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM2G473743 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 2 | 2 | 15 | 66.67% | 88.24% | 6 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999887' χ2 p-value for Mo17 x B73: '.0592297' Biased in favor of strain: '' |
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| GRMZM2G473711 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G473711 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G473709 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G473709 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 3 | 60.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |