Displaying data sets 32801 - 32900 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G11010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G11010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G11000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 218 186 175 502 53.96% 74.15% 404 677 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.195194'
Avg. expression score for this sample: '397.545'
Avg. expression score in LCM sample: '352.706'
Tissue used: 'pure endosperm, no chalazal'
AT5G11000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2434 x 10-2 304 187 102 397 61.91% 79.56% 491 499 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.195194'
Avg. expression score for this sample: '277.996'
Avg. expression score in LCM sample: '352.706'
Tissue used: 'full endosperm'
AT5G11000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.1877 x 10-2 45 94 19 30 32.37% 61.22% 139 49 TAIR8 Avg. embryo expression (dissected): '127.566'
Avg. embryo expression (LCM): '133.146'
AT5G11000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.2 x 10-5 109 20 84.50% 129 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G11000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.123 x 10-3 49 9 84.48% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G11000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4061 x 10-2 87 22 79.82% 109 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 0 1 50.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.78806'
Avg. expression score in LCM sample: '16.9908'
Tissue used: 'pure endosperm, no chalazal'
AT5G10990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.02987'
Avg. expression score in LCM sample: '16.9908'
Tissue used: 'full endosperm'
AT5G10990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '2.90103'
AT5G10990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '731.192'
Avg. expression score in LCM sample: '452.725'
Tissue used: 'pure endosperm, no chalazal'
AT5G10980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '955.067'
Avg. expression score in LCM sample: '452.725'
Tissue used: 'full endosperm'
AT5G10980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1070.21'
Avg. embryo expression (LCM): '1358.31'
AT5G10980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.52772'
Avg. expression score in LCM sample: '1.79315'
Tissue used: 'pure endosperm, no chalazal'
AT5G10970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.64668'
Avg. expression score in LCM sample: '1.79315'
Tissue used: 'full endosperm'
AT5G10970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '18.3285'
Avg. embryo expression (LCM): '4.609'
AT5G10970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.37057 x 10-1 892 364 480 951 71.02% 66.46% 1256 1431 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-15'
Avg. expression score for this sample: '1498.49'
Avg. expression score in LCM sample: '1397.07'
Tissue used: 'pure endosperm, no chalazal'
AT5G10960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2 x 10-18 1308 468 624 2000 73.65% 76.22% 1776 2624 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-15'
Avg. expression score for this sample: '1847.69'
Avg. expression score in LCM sample: '1397.07'
Tissue used: 'full endosperm'
AT5G10960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.69336 x 10-1 407 383 125 128 51.52% 50.59% 790 253 TAIR8 Avg. embryo expression (dissected): '941.235'
Avg. embryo expression (LCM): '762.419'
AT5G10960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.49 x 10-4 561 147 79.24% 708 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.0 x 10-5 1516 447 77.23% 1963 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1584 236 87.03% 1820 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.0 x 10-6 15 27 37 17 35.71% 31.48% 42 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-06'
Avg. expression score for this sample: '173.2'
Avg. expression score in LCM sample: '38.4497'
Tissue used: 'pure endosperm, no chalazal'
AT5G10950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4638 x 10-2 44 27 45 36 61.97% 44.44% 71 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-06'
Avg. expression score for this sample: '254.488'
Avg. expression score in LCM sample: '38.4497'
Tissue used: 'full endosperm'
AT5G10950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.65928 x 10-1 24 35 12 8 40.68% 40.00% 59 20 TAIR8 Avg. embryo expression (dissected): '221.959'
Avg. embryo expression (LCM): '209.176'
AT5G10950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.97933 x 10-1 8 8 50.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1 x 10-6 586 369 61.36% 955 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9602 x 10-2 135 237 36.29% 372 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10946 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.286131'
Avg. expression score for this sample: '4.24909'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G10946 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2381 x 10-1 1 3 1 0 25.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.286131'
Avg. expression score for this sample: '17.439'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G10946 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G10946 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10946 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10946 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10945 MIR156D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G10945 MIR156D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G10945 MIR156D embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G10945 MIR156D endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10945 MIR156D endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10945 MIR156D endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10940 ASG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.10411 x 10-1 46 16 23 49 74.19% 68.06% 62 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020883'
Avg. expression score for this sample: '82.7925'
Avg. expression score in LCM sample: '51.7514'
Tissue used: 'pure endosperm, no chalazal'
AT5G10940 ASG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6278 x 10-2 245 87 162 384 73.80% 70.33% 332 546 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020883'
Avg. expression score for this sample: '160.897'
Avg. expression score in LCM sample: '51.7514'
Tissue used: 'full endosperm'
AT5G10940 ASG2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 49 44 14 9 52.69% 39.13% 93 23 TAIR8 Avg. embryo expression (dissected): '94.5017'
Avg. embryo expression (LCM): '89.392'
AT5G10940 ASG2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.5094 x 10-2 37 7 84.09% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10940 ASG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.907 x 10-3 234 56 80.69% 290 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10940 ASG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.6 x 10-11 242 27 89.96% 269 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10930 CIPK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.4856'
Avg. expression score in LCM sample: '8.40721'
Tissue used: 'pure endosperm, no chalazal'
AT5G10930 CIPK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.5146'
Avg. expression score in LCM sample: '8.40721'
Tissue used: 'full endosperm'
AT5G10930 CIPK5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.1908'
Avg. embryo expression (LCM): '5.75183'
AT5G10930 CIPK5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10930 CIPK5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10930 CIPK5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 73 43 29 68 62.93% 70.10% 116 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.940297'
Avg. expression score for this sample: '71.1101'
Avg. expression score in LCM sample: '34.9222'
Tissue used: 'pure endosperm, no chalazal'
AT5G10920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.26488 x 10-1 49 24 36 81 67.12% 69.23% 73 117 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.940297'
Avg. expression score for this sample: '55.3946'
Avg. expression score in LCM sample: '34.9222'
Tissue used: 'full endosperm'
AT5G10920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.13555 x 10-1 226 205 37 34 52.44% 47.89% 431 71 TAIR8 Avg. embryo expression (dissected): '242.118'
Avg. embryo expression (LCM): '266.493'
AT5G10920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.7674 x 10-2 19 19 50.00% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.59326 x 10-1 79 27 74.53% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8 x 10-8 116 12 90.62% 128 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.04753 x 10-1 18 10 11 10 64.29% 47.62% 28 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.650353'
Avg. expression score for this sample: '80.9155'
Avg. expression score in LCM sample: '13.6544'
Tissue used: 'pure endosperm, no chalazal'
AT5G10910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.63711 x 10-1 27 4 5 13 87.10% 72.22% 31 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.650353'
Avg. expression score for this sample: '67.0069'
Avg. expression score in LCM sample: '13.6544'
Tissue used: 'full endosperm'
AT5G10910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.52647 x 10-1 64 36 21 6 64.00% 22.22% 100 27 TAIR8 Avg. embryo expression (dissected): '253.556'
Avg. embryo expression (LCM): '162.37'
AT5G10910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.24783 x 10-1 39 20 66.10% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.55113 x 10-1 30 18 62.50% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.42424 x 10-1 0 4 1 1 0.00% 50.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733222'
Avg. expression score for this sample: '19.7547'
Avg. expression score in LCM sample: '18.0784'
Tissue used: 'pure endosperm, no chalazal'
AT5G10900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 3 0 8 25.00% 100.00% 4 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733222'
Avg. expression score for this sample: '21.8899'
Avg. expression score in LCM sample: '18.0784'
Tissue used: 'full endosperm'
AT5G10900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.865 x 10-2 1 8 2 0 11.11% 0.00% 9 2 TAIR8 Avg. embryo expression (dissected): '25.8558'
Avg. embryo expression (LCM): '34.2472'
AT5G10900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.1285 11 2 84.62% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.07522 x 10-1 5 9 35.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '16.5793'
Avg. expression score in LCM sample: '23.2227'
Tissue used: 'pure endosperm, no chalazal'
AT5G10890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 4 100.00% 0 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '10.9857'
Avg. expression score in LCM sample: '23.2227'
Tissue used: 'full endosperm'
AT5G10890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 2 1 0 60.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '36.776'
Avg. embryo expression (LCM): '4.25736'
AT5G10890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.835 x 10-3 25 33 43.10% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.71644 x 10-1 31 5 86.11% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.50711'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G10880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.25845'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G10880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 1 0 66.67% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '12.9209'
Avg. embryo expression (LCM): '0'
AT5G10880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10870 CM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 4 4 10 63.64% 71.43% 11 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.008327'
Avg. expression score for this sample: '106.262'
Avg. expression score in LCM sample: '39.7579'
Tissue used: 'pure endosperm, no chalazal'
AT5G10870 CM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.067 x 10-3 59 19 27 113 75.64% 80.71% 78 140 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.008327'
Avg. expression score for this sample: '213.56'
Avg. expression score in LCM sample: '39.7579'
Tissue used: 'full endosperm'
AT5G10870 CM2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.40541 x 10-1 9 16 8 4 36.00% 33.33% 25 12 TAIR8 Avg. embryo expression (dissected): '160.321'
Avg. embryo expression (LCM): '112.851'
AT5G10870 CM2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.15756 x 10-1 22 4 84.62% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10870 CM2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.31 x 10-4 150 14 91.46% 164 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10870 CM2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.4 x 10-6 206 17 92.38% 223 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G10860 CBSX3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.17783 x 10-1 47 26 10 46 64.38% 82.14% 73 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00017'
Avg. expression score for this sample: '1239.73'
Avg. expression score in LCM sample: '289.916'
Tissue used: 'pure endosperm, no chalazal'
AT5G10860 CBSX3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.63 x 10-4 115 46 55 244 71.43% 81.61% 161 299 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00017'
Avg. expression score for this sample: '1510.26'
Avg. expression score in LCM sample: '289.916'
Tissue used: 'full endosperm'