| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G022629 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.26 x 10-12 | 53 | 1 | 48 | 0 | 98.15% | 0.00% | 54 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.48e-12' χ2 p-value for Mo17 x B73: '4.26e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G022629 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5655 x 10-3 | 20 | 0 | 12 | 1 | 100.00% | 7.69% | 20 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015655' χ2 p-value for Mo17 x B73: '6.46e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G022627 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G022627 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 3 | 100.00% | 50.00% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G022625 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.9627 x 10-3 | 278 | 207 | 304 | 241 | 57.32% | 44.22% | 485 | 545 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0012644' χ2 p-value for Mo17 x B73: '.0069627' Biased in favor of strain: 'B73' |
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| GRMZM2G022625 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.12943 x 10-2 | 441 | 176 | 144 | 208 | 71.47% | 59.09% | 617 | 352 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0112943' χ2 p-value for Mo17 x B73: '.0025688' Biased in favor of strain: '' |
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| GRMZM2G022619 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 8803 | 2352 | 4175 | 4472 | 78.92% | 51.72% | 11155 | 8647 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G022619 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 11373 | 3746 | 9798 | 4084 | 75.22% | 29.42% | 15119 | 13882 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G022611 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.886635 x 10-1 | 59 | 50 | 63 | 43 | 54.13% | 40.57% | 109 | 106 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3886635' χ2 p-value for Mo17 x B73: '.0520679' Biased in favor of strain: '' |
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| GRMZM2G022611 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.929798 x 10-1 | 42 | 29 | 23 | 40 | 59.15% | 63.49% | 71 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1793579' χ2 p-value for Mo17 x B73: '.5929798' Biased in favor of strain: '' |
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| GRMZM2G022558 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.04303 x 10-2 | 129 | 43 | 98 | 85 | 75.00% | 46.45% | 172 | 183 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0204303' χ2 p-value for Mo17 x B73: '6.55e-09' Biased in favor of strain: '' |
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| GRMZM2G022558 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.952101 x 10-1 | 880 | 801 | 770 | 720 | 52.35% | 48.32% | 1681 | 1490 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0540009' χ2 p-value for Mo17 x B73: '.1952101' Biased in favor of strain: '' |
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| GRMZM2G022547 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 2 | 0 | 50.00% | 0.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G022547 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G022506 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.85 x 10-15 | 261 | 36 | 172 | 20 | 87.88% | 10.42% | 297 | 192 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.85e-15' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G022506 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 617 | 135 | 678 | 119 | 82.05% | 14.93% | 752 | 797 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G022499 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.00827 x 10-1 | 210 | 130 | 139 | 128 | 61.76% | 47.94% | 340 | 267 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000143' χ2 p-value for Mo17 x B73: '.500827' Biased in favor of strain: '' |
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| GRMZM2G022499 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.789455 x 10-1 | 68 | 77 | 66 | 107 | 46.90% | 61.85% | 145 | 173 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.41e-07' χ2 p-value for Mo17 x B73: '.1789455' Biased in favor of strain: '' |
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| GRMZM2G022453 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 8 | 14 | 83.33% | 63.64% | 6 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.7630244' Biased in favor of strain: '' |
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| GRMZM2G022453 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.618044 x 10-1 | 23 | 25 | 16 | 17 | 47.92% | 51.52% | 48 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.77283' χ2 p-value for Mo17 x B73: '.8618044' Biased in favor of strain: '' |
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| GRMZM2G022442 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 6 | 3 | 60.00% | 33.33% | 5 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G022442 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G022437 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.402792 x 10-1 | 7 | 5 | 16 | 51 | 58.33% | 76.12% | 12 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5402792' χ2 p-value for Mo17 x B73: '.1007249' Biased in favor of strain: '' |
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| GRMZM2G022437 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.574625 x 10-1 | 0 | 15 | 15 | 16 | 0.00% | 51.61% | 15 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '.8574625' Biased in favor of strain: '' |
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| GRMZM2G022413 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.153 x 10-4 | 318 | 222 | 423 | 322 | 58.89% | 43.22% | 540 | 745 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000361' χ2 p-value for Mo17 x B73: '.0002153' Biased in favor of strain: 'B73' |
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| GRMZM2G022413 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.06573 x 10-2 | 56 | 13 | 39 | 39 | 81.16% | 50.00% | 69 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0106573' χ2 p-value for Mo17 x B73: '.0017932' Biased in favor of strain: '' |
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| GRMZM2G022403 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.89081 x 10-2 | 311 | 121 | 137 | 167 | 71.99% | 54.93% | 432 | 304 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0189081' χ2 p-value for Mo17 x B73: '.0000143' Biased in favor of strain: '' |
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| GRMZM2G022403 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.88 x 10-5 | 203 | 129 | 217 | 113 | 61.14% | 34.24% | 332 | 330 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000488' χ2 p-value for Mo17 x B73: '1.03e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G022383 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.789 x 10-4 | 185 | 108 | 110 | 61 | 63.14% | 35.67% | 293 | 171 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.85e-06' χ2 p-value for Mo17 x B73: '.0001789' Biased in favor of strain: 'B73' |
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| GRMZM2G022383 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.19117 x 10-2 | 218 | 84 | 174 | 202 | 72.19% | 53.72% | 302 | 376 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0419117' χ2 p-value for Mo17 x B73: '1.01e-07' Biased in favor of strain: '' |
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| GRMZM2G022359 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 0.0 | 39 | 209 | 201 | 35 | 15.73% | 14.83% | 248 | 236 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G022359 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.13 x 10-6 | 409 | 275 | 304 | 204 | 59.80% | 40.16% | 684 | 508 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.00e-07' χ2 p-value for Mo17 x B73: '9.13e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G022318 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.0104 x 10-3 | 3129 | 2618 | 3936 | 3696 | 54.45% | 48.43% | 5747 | 7632 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.58e-11' χ2 p-value for Mo17 x B73: '.0060104' Biased in favor of strain: 'B73' |
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| GRMZM2G022318 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 x 10-30 | 369 | 23 | 309 | 67 | 94.13% | 17.82% | 392 | 376 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.72e-31' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G022313 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.155203 x 10-1 | 119 | 75 | 137 | 124 | 61.34% | 47.51% | 194 | 261 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1155203' χ2 p-value for Mo17 x B73: '5.19e-11' Biased in favor of strain: '' |
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| GRMZM2G022313 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.041263 x 10-1 | 80 | 45 | 49 | 44 | 64.00% | 47.31% | 125 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017451' χ2 p-value for Mo17 x B73: '.6041263' Biased in favor of strain: '' |
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| GRMZM2G022311 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G022311 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G022308 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.285795 x 10-1 | 65 | 37 | 21 | 55 | 63.73% | 72.37% | 102 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5285795' χ2 p-value for Mo17 x B73: '.291682' Biased in favor of strain: '' |
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| GRMZM2G022308 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.2775 x 10-2 | 93 | 62 | 48 | 78 | 60.00% | 61.90% | 155 | 126 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.012775' χ2 p-value for Mo17 x B73: '.0075263' Biased in favor of strain: '' |
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| GRMZM2G022298 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.4786 x 10-3 | 35 | 4 | 30 | 12 | 89.74% | 28.57% | 39 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.91e-07' χ2 p-value for Mo17 x B73: '.0054786' Biased in favor of strain: 'B73' |
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| GRMZM2G022298 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1433 x 10-3 | 82 | 18 | 42 | 35 | 82.00% | 45.45% | 100 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011433' χ2 p-value for Mo17 x B73: '.0000786' Biased in favor of strain: 'B73' |
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| GRMZM2G022293 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G022293 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 5 | 0 | 100.00% | 0.00% | 8 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G022283 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 3 | 2 | 100.00% | 40.00% | 1 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G022283 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 1 | 0 | 33.33% | 0.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G022275 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.504428 x 10-1 | 848 | 416 | 367 | 681 | 67.09% | 64.98% | 1264 | 1048 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7504428' χ2 p-value for Mo17 x B73: '.247003' Biased in favor of strain: '' |
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| GRMZM2G022275 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.095628 x 10-1 | 777 | 570 | 555 | 547 | 57.68% | 49.64% | 1347 | 1102 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.70e-08' χ2 p-value for Mo17 x B73: '.8095628' Biased in favor of strain: '' |
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| GRMZM2G022269 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.199444 x 10-1 | 50 | 49 | 19 | 29 | 50.51% | 60.42% | 99 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9199444' χ2 p-value for Mo17 x B73: '.1489147' Biased in favor of strain: '' |
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| GRMZM2G022269 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.624038 x 10-1 | 17 | 14 | 26 | 25 | 54.84% | 49.02% | 31 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1624038' χ2 p-value for Mo17 x B73: '.0075087' Biased in favor of strain: '' |
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| GRMZM2G022266 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.305732 x 10-1 | 12 | 2 | 16 | 4 | 85.71% | 20.00% | 14 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1305732' χ2 p-value for Mo17 x B73: '9.55e-06' Biased in favor of strain: '' |
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| GRMZM2G022266 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.024704 x 10-1 | 20 | 9 | 33 | 21 | 68.97% | 38.89% | 29 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0410872' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |
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| GRMZM2G022258 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.7763 x 10-3 | 570 | 353 | 345 | 273 | 61.76% | 44.17% | 923 | 618 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.16e-13' χ2 p-value for Mo17 x B73: '.0037763' Biased in favor of strain: 'B73' |
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| GRMZM2G022258 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.500399 x 10-1 | 205 | 110 | 160 | 159 | 65.08% | 49.84% | 315 | 319 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5500399' χ2 p-value for Mo17 x B73: '1.84e-10' Biased in favor of strain: '' |
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| GRMZM2G022255 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G022255 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.779317 x 10-1 | 21 | 3 | 17 | 10 | 87.50% | 37.04% | 24 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002386' χ2 p-value for Mo17 x B73: '.1779317' Biased in favor of strain: '' |
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| GRMZM2G022252 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 0 | 0 | 60.00% | 5 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G022252 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G022248 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.23 x 10-6 | 358 | 103 | 139 | 167 | 77.66% | 54.58% | 461 | 306 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.56e-07' χ2 p-value for Mo17 x B73: '7.23e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G022248 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.84 x 10-7 | 271 | 165 | 257 | 131 | 62.16% | 33.76% | 436 | 388 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.84e-07' χ2 p-value for Mo17 x B73: '1.59e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G022242 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.858304 x 10-1 | 28 | 16 | 26 | 29 | 63.64% | 52.73% | 44 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0704404' χ2 p-value for Mo17 x B73: '.6858304' Biased in favor of strain: '' |
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| GRMZM2G022242 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G022229 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.3091 x 10-3 | 332 | 105 | 163 | 249 | 75.97% | 60.44% | 437 | 412 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000368' χ2 p-value for Mo17 x B73: '.0073091' Biased in favor of strain: 'B73' |
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| GRMZM2G022229 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.44 x 10-13 | 466 | 223 | 353 | 182 | 67.63% | 34.02% | 689 | 535 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.09e-20' χ2 p-value for Mo17 x B73: '1.44e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G022213 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.52 x 10-6 | 765 | 516 | 870 | 687 | 59.72% | 44.12% | 1281 | 1557 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.47e-12' χ2 p-value for Mo17 x B73: '3.52e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G022213 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.6 x 10-20 | 442 | 74 | 318 | 127 | 85.66% | 28.54% | 516 | 445 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.60e-20' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G022206 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.16 x 10-8 | 41 | 75 | 74 | 56 | 35.34% | 43.08% | 116 | 130 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.29e-13' χ2 p-value for Mo17 x B73: '1.16e-08' Biased in favor of strain: '' |
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| GRMZM2G022206 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.66 x 10-6 | 90 | 209 | 95 | 167 | 30.10% | 63.74% | 299 | 262 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.90e-12' χ2 p-value for Mo17 x B73: '8.66e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G022180 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 7797 | 3829 | 7478 | 3811 | 67.07% | 33.76% | 11626 | 11289 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G022180 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 5430 | 1448 | 3036 | 2932 | 78.95% | 49.13% | 6878 | 5968 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G022175 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.37 x 10-15 | 912 | 266 | 552 | 712 | 77.42% | 56.33% | 1178 | 1264 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.93e-15' χ2 p-value for Mo17 x B73: '6.37e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G022175 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.16 x 10-5 | 363 | 222 | 376 | 265 | 62.05% | 41.34% | 585 | 641 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.55e-09' χ2 p-value for Mo17 x B73: '.0000116' Biased in favor of strain: 'B73' |
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| GRMZM2G022162 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 4 | 0 | 50.00% | 0.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G022162 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G022130 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.4 x 10-16 | 388 | 45 | 111 | 69 | 89.61% | 38.33% | 433 | 180 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.22e-24' χ2 p-value for Mo17 x B73: '7.40e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G022130 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.24 x 10-21 | 253 | 76 | 279 | 97 | 76.90% | 25.80% | 329 | 376 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.70e-22' χ2 p-value for Mo17 x B73: '6.24e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G022120 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.07 x 10-4 | 337 | 159 | 231 | 161 | 67.94% | 41.07% | 496 | 392 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.32e-15' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: 'B73' |
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| GRMZM2G022120 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | maternally biased | 3.52 x 10-8 | 598 | 58 | 62 | 265 | 91.16% | 81.04% | 656 | 327 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.52e-08' Biased in favor of strain: '' |
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| GRMZM2G022107 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.538276 x 10-1 | 543 | 253 | 356 | 447 | 68.22% | 55.67% | 796 | 803 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3538276' χ2 p-value for Mo17 x B73: '3.78e-11' Biased in favor of strain: '' |
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| GRMZM2G022107 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.24 x 10-15 | 747 | 414 | 524 | 301 | 64.34% | 36.48% | 1161 | 825 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.47e-22' χ2 p-value for Mo17 x B73: '8.24e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G022088 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.01964 x 10-2 | 1255 | 900 | 1115 | 1028 | 58.24% | 47.97% | 2155 | 2143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.05e-14' χ2 p-value for Mo17 x B73: '.0601964' Biased in favor of strain: '' |
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| GRMZM2G022088 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.8 x 10-7 | 1617 | 617 | 900 | 1448 | 72.38% | 61.67% | 2234 | 2348 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.01e-08' χ2 p-value for Mo17 x B73: '2.80e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G022061 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.266232 x 10-1 | 39 | 20 | 21 | 82 | 66.10% | 79.61% | 59 | 103 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9266232' χ2 p-value for Mo17 x B73: '.005321' Biased in favor of strain: '' |
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| GRMZM2G022061 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.242061 x 10-1 | 72 | 78 | 29 | 56 | 48.00% | 65.88% | 150 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6242061' χ2 p-value for Mo17 x B73: '.0034053' Biased in favor of strain: '' |
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| GRMZM2G022054 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.42 x 10-26 | 148 | 14 | 147 | 13 | 91.36% | 8.12% | 162 | 160 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.42e-26' χ2 p-value for Mo17 x B73: '3.19e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G022054 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999643 x 10-1 | 40 | 20 | 12 | 14 | 66.67% | 53.85% | 60 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999643' χ2 p-value for Mo17 x B73: '.1655178' Biased in favor of strain: '' |
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| GRMZM2G022052 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 0 | 1 | 40.00% | 100.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2058979' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G022052 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 2 | 2 | 0.00% | 50.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G022041 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.45 x 10-5 | 8 | 33 | 0 | 22 | 19.51% | 100.00% | 41 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000945' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G022041 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.828 x 10-4 | 2 | 12 | 0 | 28 | 14.29% | 100.00% | 14 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000322' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: 'Mo17' |
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| GRMZM2G022032 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.94 x 10-27 | 2135 | 663 | 1404 | 1075 | 76.30% | 43.36% | 2798 | 2479 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.94e-27' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G022032 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1884 | 743 | 1423 | 714 | 71.72% | 33.41% | 2627 | 2137 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G022019 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1691 | 561 | 1154 | 568 | 75.09% | 32.98% | 2252 | 1722 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G022019 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1079 | 207 | 691 | 418 | 83.90% | 37.69% | 1286 | 1109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G022014 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.953269 x 10-1 | 140 | 81 | 90 | 154 | 63.35% | 63.11% | 221 | 244 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2953269' χ2 p-value for Mo17 x B73: '.2392093' Biased in favor of strain: '' |
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| GRMZM2G022014 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.381475 x 10-1 | 130 | 156 | 143 | 119 | 45.45% | 45.42% | 286 | 262 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1241924' χ2 p-value for Mo17 x B73: '.1381475' Biased in favor of strain: '' |
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| GRMZM2G021921 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 11 | 13 | 5 | 5 | 45.83% | 50.00% | 24 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6830914' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G021921 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.236585 x 10-1 | 10 | 6 | 4 | 10 | 62.50% | 71.43% | 16 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236585' χ2 p-value for Mo17 x B73: '.7054571' Biased in favor of strain: '' |
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| GRMZM2G021912 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170598 x 10-1 | 11 | 7 | 8 | 8 | 61.11% | 50.00% | 18 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170598' χ2 p-value for Mo17 x B73: '.1572991' Biased in favor of strain: '' |
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| GRMZM2G021912 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.710934 x 10-1 | 12 | 8 | 9 | 2 | 60.00% | 18.18% | 20 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3710934' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: '' |