| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G11770 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1003.69' Avg. embryo expression (LCM): '610.297' |
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| AT5G11770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11770 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.10234 x 10-1 | 33 | 5 | 19 | 6 | 86.84% | 24.00% | 38 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.64058' Avg. expression score for this sample: '111.402' Avg. expression score in LCM sample: '52.6185' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 14 | 0 | 10 | 3 | 100.00% | 23.08% | 14 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.64058' Avg. expression score for this sample: '159.202' Avg. expression score in LCM sample: '52.6185' Tissue used: 'full endosperm' |
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| AT5G11760 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.32107 x 10-1 | 42 | 14 | 18 | 3 | 75.00% | 14.29% | 56 | 21 | TAIR8 |
Avg. embryo expression (dissected): '155.423' Avg. embryo expression (LCM): '148.367' |
||||
| AT5G11760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 3 | 62.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.3981 x 10-2 | 12 | 21 | 36.36% | 33 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11760 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.26 x 10-4 | 20 | 0 | 100.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '67.7334' Avg. expression score in LCM sample: '35.2603' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 0 | 0 | 1 | 100.00% | 100.00% | 2 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '83.6533' Avg. expression score in LCM sample: '35.2603' Tissue used: 'full endosperm' |
|||||
| AT5G11750 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '141.914' Avg. embryo expression (LCM): '186.52' |
||||||
| AT5G11750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.4 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11750 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11740 | AGP15 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0096 x 10-2 | 204 | 54 | 74 | 166 | 79.07% | 69.17% | 258 | 240 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '9466.03' Avg. expression score in LCM sample: '2553.79' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT5G11740 | AGP15 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 1746 | 226 | 552 | 4551 | 88.54% | 89.18% | 1972 | 5103 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '15426.9' Avg. expression score in LCM sample: '2553.79' Tissue used: 'full endosperm' |
||||
| AT5G11740 | AGP15 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.11763 x 10-1 | 68 | 57 | 11 | 5 | 54.40% | 31.25% | 125 | 16 | TAIR8 |
Avg. embryo expression (dissected): '4265.35' Avg. embryo expression (LCM): '2523.32' |
|||
| AT5G11740 | AGP15 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.86452 x 10-1 | 270 | 34 | 88.82% | 304 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G11740 | AGP15 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 2019 | 71 | 96.60% | 2090 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G11740 | AGP15 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 3202 | 93 | 97.18% | 3295 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G11730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '70.5612' Avg. expression score in LCM sample: '50.164' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '82.0306' Avg. expression score in LCM sample: '50.164' Tissue used: 'full endosperm' |
|||||||
| AT5G11730 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 1 | 0 | 1 | 66.67% | 100.00% | 3 | 1 | TAIR8 |
Avg. embryo expression (dissected): '83.0918' Avg. embryo expression (LCM): '36.131' |
||||
| AT5G11730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11730 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '120.003' Avg. expression score in LCM sample: '61.8929' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '92.3132' Avg. expression score in LCM sample: '61.8929' Tissue used: 'full endosperm' |
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| AT5G11720 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '115.859' Avg. embryo expression (LCM): '83.728' |
||||||
| AT5G11720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.33333 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11720 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.51262 x 10-1 | 49 | 36 | 19 | 76 | 57.65% | 80.00% | 85 | 95 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.36117' Avg. expression score for this sample: '328.673' Avg. expression score in LCM sample: '164.44' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.38537 x 10-1 | 33 | 10 | 17 | 38 | 76.74% | 69.09% | 43 | 55 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.36117' Avg. expression score for this sample: '259.688' Avg. expression score in LCM sample: '164.44' Tissue used: 'full endosperm' |
|||||
| AT5G11710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 36 | 40 | 18 | 22 | 47.37% | 55.00% | 76 | 40 | TAIR8 |
Avg. embryo expression (dissected): '289.301' Avg. embryo expression (LCM): '154.897' |
||||
| AT5G11710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.78781 x 10-1 | 14 | 8 | 63.64% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.08604 x 10-1 | 84 | 25 | 77.06% | 109 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.04 x 10-4 | 115 | 16 | 87.79% | 131 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.29079 x 10-1 | 54 | 15 | 16 | 43 | 78.26% | 72.88% | 69 | 59 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.201279' Avg. expression score for this sample: '281.475' Avg. expression score in LCM sample: '181.343' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.24643 x 10-1 | 84 | 49 | 25 | 81 | 63.16% | 76.42% | 133 | 106 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.201279' Avg. expression score for this sample: '294.113' Avg. expression score in LCM sample: '181.343' Tissue used: 'full endosperm' |
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| AT5G11700 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.77287 x 10-1 | 31 | 39 | 13 | 16 | 44.29% | 55.17% | 70 | 29 | TAIR8 |
Avg. embryo expression (dissected): '310.575' Avg. embryo expression (LCM): '140.543' |
||||
| AT5G11700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 24 | 10 | 70.59% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.17767 x 10-1 | 85 | 36 | 70.25% | 121 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11700 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.1 x 10-6 | 145 | 17 | 89.51% | 162 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11690 | TIM17-3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '26.0276' Avg. expression score in LCM sample: '20.6506' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11690 | TIM17-3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 7 | 4 | 1 | 3 | 63.64% | 75.00% | 11 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '33.2224' Avg. expression score in LCM sample: '20.6506' Tissue used: 'full endosperm' |
||||
| AT5G11690 | TIM17-3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 1 | 0 | 1 | 66.67% | 100.00% | 3 | 1 | TAIR8 |
Avg. embryo expression (dissected): '68.3664' Avg. embryo expression (LCM): '79.4079' |
|||
| AT5G11690 | TIM17-3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11690 | TIM17-3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.89891 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G11690 | TIM17-3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.23715 x 10-1 | 7 | 1 | 87.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G11680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 12 | 8 | 4 | 12 | 60.00% | 75.00% | 20 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.333968' Avg. expression score for this sample: '324.688' Avg. expression score in LCM sample: '101.019' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.04728 x 10-1 | 16 | 5 | 7 | 28 | 76.19% | 80.00% | 21 | 35 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.333968' Avg. expression score for this sample: '390.921' Avg. expression score in LCM sample: '101.019' Tissue used: 'full endosperm' |
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| AT5G11680 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.1591 x 10-1 | 14 | 4 | 1 | 3 | 77.78% | 75.00% | 18 | 4 | TAIR8 |
Avg. embryo expression (dissected): '151.905' Avg. embryo expression (LCM): '29.1736' |
||||
| AT5G11680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.36808 x 10-1 | 31 | 12 | 72.09% | 43 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11680 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.5425 x 10-2 | 66 | 11 | 85.71% | 77 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11670 | NADP-ME2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.94389 x 10-1 | 8 | 2 | 0 | 6 | 80.00% | 100.00% | 10 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00156' Avg. expression score for this sample: '18.917' Avg. expression score in LCM sample: '37.4797' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT5G11670 | NADP-ME2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.699 x 10-3 | 11 | 0 | 0 | 15 | 100.00% | 100.00% | 11 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00156' Avg. expression score for this sample: '41.7421' Avg. expression score in LCM sample: '37.4797' Tissue used: 'full endosperm' |
||||
| AT5G11670 | NADP-ME2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 6 | 3 | 1 | 0 | 66.67% | 0.00% | 9 | 1 | TAIR8 |
Avg. embryo expression (dissected): '12.3104' Avg. embryo expression (LCM): '9.89616' |
|||
| AT5G11670 | NADP-ME2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G11670 | NADP-ME2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.41667 x 10-1 | 22 | 0 | 100.00% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G11670 | NADP-ME2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.07717 x 10-1 | 44 | 1 | 97.78% | 45 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G11660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.53402' Avg. expression score in LCM sample: '1.58737' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.377502' Avg. expression score in LCM sample: '1.58737' Tissue used: 'full endosperm' |
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| AT5G11660 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.1223' Avg. embryo expression (LCM): '0' |
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| AT5G11660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11660 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.61032 x 10-1 | 90 | 40 | 55 | 74 | 69.23% | 57.36% | 130 | 129 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.090636' Avg. expression score for this sample: '337.133' Avg. expression score in LCM sample: '95.8598' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0848 x 10-2 | 247 | 107 | 75 | 249 | 69.77% | 76.85% | 354 | 324 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.090636' Avg. expression score for this sample: '456.993' Avg. expression score in LCM sample: '95.8598' Tissue used: 'full endosperm' |
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| AT5G11650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.88408 x 10-1 | 49 | 45 | 7 | 11 | 52.13% | 61.11% | 94 | 18 | TAIR8 |
Avg. embryo expression (dissected): '253.008' Avg. embryo expression (LCM): '124.455' |
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| AT5G11650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.85765 x 10-1 | 51 | 19 | 72.86% | 70 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.319 x 10-3 | 99 | 20 | 83.19% | 119 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.29357 x 10-1 | 55 | 14 | 79.71% | 69 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '55.3409' Avg. expression score in LCM sample: '33.8787' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '65.522' Avg. expression score in LCM sample: '33.8787' Tissue used: 'full endosperm' |
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| AT5G11640 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '82.3158' Avg. embryo expression (LCM): '50.6739' |
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| AT5G11640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11640 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11630 | NOXY2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.56279' Avg. expression score in LCM sample: '4.52696' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11630 | NOXY2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '7.65936' Avg. expression score in LCM sample: '4.52696' Tissue used: 'full endosperm' |
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| AT5G11630 | NOXY2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.49845 x 10-1 | 1 | 6 | 2 | 1 | 14.29% | 33.33% | 7 | 3 | TAIR8 |
Avg. embryo expression (dissected): '31.2107' Avg. embryo expression (LCM): '34.8375' |
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| AT5G11630 | NOXY2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G11630 | NOXY2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.33333 x 10-1 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G11630 | NOXY2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 5 | 50.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G11620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.14163' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.74407' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G11620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.965591' Avg. embryo expression (LCM): '0' |
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| AT5G11620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G11610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.452316' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G11610 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '.653046' |
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| AT5G11610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G11610 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |