GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G026956	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.538987 x 10^-1	1234	748	1640	3249	62.26%	66.46%	1982	4889	RefGen V2	χ2 p-value for B73 x Mo17: '.0000316' χ2 p-value for Mo17 x B73: '.7538987' Biased in favor of strain: ''
GRMZM2G026956	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.1722 x 10^-3	125	81	260	471	60.68%	64.43%	206	731	RefGen V2	χ2 p-value for B73 x Mo17: '.0021722' χ2 p-value for Mo17 x B73: '5.99e-15' Biased in favor of strain: ''
GRMZM2G026939	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.027459 x 10^-1	780	765	278	1585	50.49%	85.08%	1545	1863	RefGen V2	χ2 p-value for B73 x Mo17: '.7027459' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G026939	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	maternally biased	1.65 x 10^-6	6999	3158	1621	7762	68.91%	82.72%	10157	9383	RefGen V2	χ2 p-value for B73 x Mo17: '1.65e-06' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G026930	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		31	0	0	4	100.00%	100.00%	31	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0000825' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G026930	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.657867 x 10^-1	26	37	17	36	41.27%	67.92%	63	53	RefGen V2	χ2 p-value for B73 x Mo17: '.1657867' χ2 p-value for Mo17 x B73: '.0090582' Biased in favor of strain: ''
GRMZM2G026927	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.229856 x 10^-1	53	54	79	72	49.53%	47.68%	107	151	RefGen V2	χ2 p-value for B73 x Mo17: '.9229856' χ2 p-value for Mo17 x B73: '.5689138' Biased in favor of strain: ''
GRMZM2G026927	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.03 x 10^-23	166	223	310	168	42.67%	35.15%	389	478	RefGen V2	χ2 p-value for B73 x Mo17: '1.03e-23' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G026922	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.21 x 10^-8	136	18	70	35	88.31%	33.33%	154	105	RefGen V2	χ2 p-value for B73 x Mo17: '1.21e-08' χ2 p-value for Mo17 x B73: '4.30e-13' Biased in favor of strain: 'B73'
GRMZM2G026922	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.39245 x 10^-1	115	108	103	94	51.57%	47.72%	223	197	RefGen V2	χ2 p-value for B73 x Mo17: '.639245' χ2 p-value for Mo17 x B73: '.5213775' Biased in favor of strain: ''
GRMZM2G026918	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	5	7	1	54.55%	12.50%	11	8	RefGen V2	χ2 p-value for B73 x Mo17: '.7630246' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: ''
GRMZM2G026918	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	3	6	71.43%	66.67%	7	9	RefGen V2	χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G026911	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G026911	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G026900	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.87596 x 10^-1	59	48	57	36	55.14%	38.71%	107	93	RefGen V2	χ2 p-value for B73 x Mo17: '.287596' χ2 p-value for Mo17 x B73: '.0294359' Biased in favor of strain: ''
GRMZM2G026900	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.24234 x 10^-1	52	23	39	61	69.33%	61.00%	75	100	RefGen V2	χ2 p-value for B73 x Mo17: '.624234' χ2 p-value for Mo17 x B73: '.2293317' Biased in favor of strain: ''
GRMZM2G026892	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.650053 x 10^-1	77	4	9	15	95.06%	62.50%	81	24	RefGen V2	χ2 p-value for B73 x Mo17: '5.92e-08' χ2 p-value for Mo17 x B73: '.6650053' Biased in favor of strain: ''
GRMZM2G026892	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.56 x 10^-28	477	144	340	106	76.81%	23.77%	621	446	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.56e-28' Biased in favor of strain: 'B73'
GRMZM2G026881	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.38274 x 10^-2	668	581	796	590	53.48%	42.57%	1249	1386	RefGen V2	χ2 p-value for B73 x Mo17: '.0138274' χ2 p-value for Mo17 x B73: '3.14e-08' Biased in favor of strain: 'B73'
GRMZM2G026881	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.18 x 10^-5	319	74	128	155	81.17%	54.77%	393	283	RefGen V2	χ2 p-value for B73 x Mo17: '1.07e-09' χ2 p-value for Mo17 x B73: '.0000218' Biased in favor of strain: 'B73'
GRMZM2G026869	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.402516 x 10^-1	45	25	30	59	64.29%	66.29%	70	89	RefGen V2	χ2 p-value for B73 x Mo17: '.6725739' χ2 p-value for Mo17 x B73: '.9402516' Biased in favor of strain: ''
GRMZM2G026869	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.547208 x 10^-1	65	59	65	60	52.42%	48.00%	124	125	RefGen V2	χ2 p-value for B73 x Mo17: '.5900139' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G026868	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.44 x 10^-20	672	340	691	390	66.40%	36.08%	1012	1081	RefGen V2	χ2 p-value for B73 x Mo17: '1.69e-25' χ2 p-value for Mo17 x B73: '5.44e-20' Biased in favor of strain: 'B73'
GRMZM2G026868	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.26 x 10^-17	545	117	304	208	82.33%	40.62%	662	512	RefGen V2	χ2 p-value for B73 x Mo17: '1.26e-17' χ2 p-value for Mo17 x B73: '7.46e-36' Biased in favor of strain: 'B73'
GRMZM2G026807	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.3443 x 10^-2	556	209	257	430	72.68%	62.59%	765	687	RefGen V2	χ2 p-value for B73 x Mo17: '.0004188' χ2 p-value for Mo17 x B73: '.023443' Biased in favor of strain: ''
GRMZM2G026807	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.75036 x 10^-2	111	75	91	126	59.68%	58.06%	186	217	RefGen V2	χ2 p-value for B73 x Mo17: '.0082992' χ2 p-value for Mo17 x B73: '.0175036' Biased in favor of strain: ''
GRMZM2G026802	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05152 x 10^-2	56	32	58	33	63.64%	36.26%	88	91	RefGen V2	χ2 p-value for B73 x Mo17: '.0105152' χ2 p-value for Mo17 x B73: '.0087746' Biased in favor of strain: 'B73'
GRMZM2G026802	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.317075 x 10^-1	74	30	50	80	71.15%	61.54%	104	130	RefGen V2	χ2 p-value for B73 x Mo17: '.3317075' χ2 p-value for Mo17 x B73: '.2148467' Biased in favor of strain: ''
GRMZM2G026793	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G026793	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	1	2	100.00%	66.67%	4	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G026783	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	8	4	75.00%	33.33%	4	12	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: ''
GRMZM2G026783	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.170598 x 10^-1	11	7	3	9	61.11%	75.00%	18	12	RefGen V2	χ2 p-value for B73 x Mo17: '.6170598' χ2 p-value for Mo17 x B73: '.5402915' Biased in favor of strain: ''
GRMZM2G026780	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.997408 x 10^-1	2110	1055	1108	1961	66.67%	63.90%	3165	3069	RefGen V2	χ2 p-value for B73 x Mo17: '.9997408' χ2 p-value for Mo17 x B73: '.0011346' Biased in favor of strain: ''
GRMZM2G026780	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.3 x 10^-29	2491	1539	1077	617	61.81%	36.42%	4030	1694	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.32e-29' Biased in favor of strain: 'B73'
GRMZM2G026767	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.616799 x 10^-1	119	94	97	91	55.87%	48.40%	213	188	RefGen V2	χ2 p-value for B73 x Mo17: '.0867177' χ2 p-value for Mo17 x B73: '.6616799' Biased in favor of strain: ''
GRMZM2G026767	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.443077 x 10^-1	123	48	101	150	71.93%	59.76%	171	251	RefGen V2	χ2 p-value for B73 x Mo17: '.1443077' χ2 p-value for Mo17 x B73: '.0202936' Biased in favor of strain: ''
GRMZM2G026746	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	1	1	50.00%	50.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G026746	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	7	0	3	22.22%	100.00%	9	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0955807' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G026742	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.06 x 10^-8	186	73	140	62	71.81%	30.69%	259	202	RefGen V2	χ2 p-value for B73 x Mo17: '2.20e-12' χ2 p-value for Mo17 x B73: '4.06e-08' Biased in favor of strain: 'B73'
GRMZM2G026742	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.09 x 10^-6	151	31	102	43	82.97%	29.66%	182	145	RefGen V2	χ2 p-value for B73 x Mo17: '3.09e-06' χ2 p-value for Mo17 x B73: '3.25e-21' Biased in favor of strain: 'B73'
GRMZM2G026703	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	9	0	1	10.00%	100.00%	10	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0001439' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G026703	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	867	8454	901	7143	9.30%	88.80%	9321	8044	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G026676	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	1	3	25.00%	75.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G026676	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	3		100.00%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G026672	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.61 x 10^-10	155	16	64	39	90.64%	37.86%	171	103	RefGen V2	χ2 p-value for B73 x Mo17: '2.91e-11' χ2 p-value for Mo17 x B73: '5.61e-10' Biased in favor of strain: 'B73'
GRMZM2G026672	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.36 x 10^-24	213	47	159	22	81.92%	12.15%	260	181	RefGen V2	χ2 p-value for B73 x Mo17: '7.43e-25' χ2 p-value for Mo17 x B73: '2.36e-24' Biased in favor of strain: 'B73'
GRMZM2G026654	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.393165 x 10^-1	12	20	10	16	37.50%	61.54%	32	26	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.2393165' Biased in favor of strain: ''
GRMZM2G026654	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999997 x 10^-1	8	9	15	30	47.06%	66.67%	17	45	RefGen V2	χ2 p-value for B73 x Mo17: '.0863432' χ2 p-value for Mo17 x B73: '.9999997' Biased in favor of strain: ''
GRMZM2G026643	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.897067 x 10^-1	14	5	9	17	73.68%	65.38%	19	26	RefGen V2	χ2 p-value for B73 x Mo17: '.5164242' χ2 p-value for Mo17 x B73: '.8897067' Biased in favor of strain: ''
GRMZM2G026643	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.51337 x 10^-1	538	536	436	399	50.09%	47.78%	1074	835	RefGen V2	χ2 p-value for B73 x Mo17: '.951337' χ2 p-value for Mo17 x B73: '.2003912' Biased in favor of strain: ''
GRMZM2G026639	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.572992 x 10^-1	20	12	12	5	62.50%	29.41%	32	17	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0895551' Biased in favor of strain: ''
GRMZM2G026639	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	3	1	1	62.50%	50.00%	8	2	RefGen V2	χ2 p-value for B73 x Mo17: '.8025764' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G026614	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.443997 x 10^-1	78	9	20	26	89.66%	56.52%	87	46	RefGen V2	χ2 p-value for B73 x Mo17: '5.40e-06' χ2 p-value for Mo17 x B73: '.1443997' Biased in favor of strain: ''
GRMZM2G026614	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.621255 x 10^-1	42	29	33	26	59.15%	44.07%	71	59	RefGen V2	χ2 p-value for B73 x Mo17: '.1228754' χ2 p-value for Mo17 x B73: '.3621255' Biased in favor of strain: ''
GRMZM2G026580	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.48 x 10^-8	222	120	188	90	64.91%	32.37%	342	278	RefGen V2	χ2 p-value for B73 x Mo17: '3.48e-08' χ2 p-value for Mo17 x B73: '4.16e-09' Biased in favor of strain: 'B73'
GRMZM2G026580	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	4	11	80.00%	73.33%	5	15	RefGen V2	χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.5838825' Biased in favor of strain: ''
GRMZM2G026556	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G026556	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.09 x 10^-8	37	2	57	6	94.87%	9.52%	39	63	RefGen V2	χ2 p-value for B73 x Mo17: '2.09e-08' χ2 p-value for Mo17 x B73: '1.32e-10' Biased in favor of strain: 'B73'
GRMZM2G026532	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.559844 x 10^-1	169	180	247	202	48.42%	44.99%	349	449	RefGen V2	χ2 p-value for B73 x Mo17: '.5559844' χ2 p-value for Mo17 x B73: '.0336968' Biased in favor of strain: ''
GRMZM2G026532	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		25	0	1	0	100.00%	0.00%	25	1	RefGen V2	χ2 p-value for B73 x Mo17: '.000407' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G026523	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	0	11	100.00%	100.00%	7	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.0190165' Biased in favor of strain: ''
GRMZM2G026523	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.66 x 10^-6	494	724	781	975	40.56%	55.52%	1218	1756	RefGen V2	χ2 p-value for B73 x Mo17: '4.39e-11' χ2 p-value for Mo17 x B73: '3.66e-06' Biased in favor of strain: 'Mo17'
GRMZM2G026490	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.110798 x 10^-1	174	159	226	191	52.25%	45.80%	333	417	RefGen V2	χ2 p-value for B73 x Mo17: '.4110798' χ2 p-value for Mo17 x B73: '.0865366' Biased in favor of strain: ''
GRMZM2G026490	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.589863 x 10^-1	188	84	91	196	69.12%	68.29%	272	287	RefGen V2	χ2 p-value for B73 x Mo17: '.3912141' χ2 p-value for Mo17 x B73: '.5589863' Biased in favor of strain: ''
GRMZM2G026470	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.65 x 10^-8	232	51	128	55	81.98%	30.05%	283	183	RefGen V2	χ2 p-value for B73 x Mo17: '4.65e-08' χ2 p-value for Mo17 x B73: '8.07e-26' Biased in favor of strain: 'B73'
GRMZM2G026470	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.112612 x 10^-1	44	35	19	44	55.70%	69.84%	79	63	RefGen V2	χ2 p-value for B73 x Mo17: '.3112612' χ2 p-value for Mo17 x B73: '.0016344' Biased in favor of strain: ''
GRMZM2G026459	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.830914 x 10^-1	11	13	7	9	45.83%	56.25%	24	16	RefGen V2	χ2 p-value for B73 x Mo17: '.6830914' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: ''
GRMZM2G026459	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	5	0	0	28.57%		7	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G026447	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.10841 x 10^-2	14	17	2	47	45.16%	95.92%	31	49	RefGen V2	χ2 p-value for B73 x Mo17: '.0110841' χ2 p-value for Mo17 x B73: '.000014' Biased in favor of strain: ''
GRMZM2G026447	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0908 x 10^-3	20	4	13	0	83.33%	0.00%	24	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0010908' χ2 p-value for Mo17 x B73: '.0003115' Biased in favor of strain: 'B73'
GRMZM2G026442	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.0536 x 10^-3	331	254	244	188	56.58%	43.52%	585	432	RefGen V2	χ2 p-value for B73 x Mo17: '.0014548' χ2 p-value for Mo17 x B73: '.0070536' Biased in favor of strain: 'B73'
GRMZM2G026442	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.877196 x 10^-1	419	207	235	358	66.93%	60.37%	626	593	RefGen V2	χ2 p-value for B73 x Mo17: '.8877196' χ2 p-value for Mo17 x B73: '.0011452' Biased in favor of strain: ''
GRMZM2G026417	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.81053 x 10^-2	129	86	52	173	60.00%	76.89%	215	225	RefGen V2	χ2 p-value for B73 x Mo17: '.0381053' χ2 p-value for Mo17 x B73: '.0011432' Biased in favor of strain: ''
GRMZM2G026417	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.28182 x 10^-2	175	215	175	241	44.87%	57.93%	390	416	RefGen V2	χ2 p-value for B73 x Mo17: '.0428182' χ2 p-value for Mo17 x B73: '.0012125' Biased in favor of strain: 'Mo17'
GRMZM2G026391	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.9 x 10^-29	755	380	1476	731	66.52%	33.12%	1135	2207	RefGen V2	χ2 p-value for B73 x Mo17: '8.87e-29' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G026391	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.735807 x 10^-1	49	12	27	52	80.33%	65.82%	61	79	RefGen V2	χ2 p-value for B73 x Mo17: '.0236132' χ2 p-value for Mo17 x B73: '.8735807' Biased in favor of strain: ''
GRMZM2G026355	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		23	0	0	0	100.00%		23	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G026355	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G026309	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.526837 x 10^-1	353	313	234	230	53.00%	49.57%	666	464	RefGen V2	χ2 p-value for B73 x Mo17: '.1211491' χ2 p-value for Mo17 x B73: '.8526837' Biased in favor of strain: ''
GRMZM2G026309	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.029948 x 10^-1	334	161	233	372	67.47%	61.49%	495	605	RefGen V2	χ2 p-value for B73 x Mo17: '.7029948' χ2 p-value for Mo17 x B73: '.0068859' Biased in favor of strain: ''
GRMZM2G026301	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	PEG	0.0	8	213	488	53	3.62%	9.80%	221	541	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G026301	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.42 x 10^-7	850	650	987	574	56.67%	36.77%	1500	1561	RefGen V2	χ2 p-value for B73 x Mo17: '2.42e-07' χ2 p-value for Mo17 x B73: '1.42e-25' Biased in favor of strain: 'B73'
GRMZM2G026231	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1142	537	901	411	68.02%	31.33%	1679	1312	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G026231	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4 x 10^-29	805	155	437	369	83.85%	45.78%	960	806	RefGen V2	χ2 p-value for B73 x Mo17: '1.36e-29' χ2 p-value for Mo17 x B73: '2.79e-36' Biased in favor of strain: 'B73'
GRMZM2G026223	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	0	0	100.00%		5	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G026223	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G026218	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.39 x 10^-8	481	309	434	287	60.89%	39.81%	790	721	RefGen V2	χ2 p-value for B73 x Mo17: '9.39e-10' χ2 p-value for Mo17 x B73: '4.39e-08' Biased in favor of strain: 'B73'
GRMZM2G026218	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.32 x 10^-7	533	109	254	328	83.02%	56.36%	642	582	RefGen V2	χ2 p-value for B73 x Mo17: '1.49e-18' χ2 p-value for Mo17 x B73: '1.32e-07' Biased in favor of strain: 'B73'
GRMZM2G026216	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	9067	2563	4083	5384	77.96%	56.87%	11630	9467	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G026216	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	6897	2856	5308	3206	70.72%	37.66%	9753	8514	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G026203	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	27	20	10	15	57.45%	60.00%	47	25	RefGen V2	χ2 p-value for B73 x Mo17: '.3072284' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G026203	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	3	6		66.67%	0	9	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G026188	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.0403 x 10^-3	9	19	3	29	32.14%	90.62%	28	32	RefGen V2	χ2 p-value for B73 x Mo17: '.0001065' χ2 p-value for Mo17 x B73: '.0040403' Biased in favor of strain: 'Mo17'
GRMZM2G026188	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	2	1	4	77.78%	80.00%	9	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0955807' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G026182	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	15	0	100.00%	0.00%	5	15	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0001075' Biased in favor of strain: ''
GRMZM2G026182	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.90169 x 10^-2	11	0	15	0	100.00%	0.00%	11	15	RefGen V2	χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '4.32e-08' Biased in favor of strain: ''
GRMZM2G026174	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.76363 x 10^-2	13	1	11	0	92.86%	0.00%	14	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0376363' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: ''
GRMZM2G026174	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	5	0	100.00%	0.00%	8	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G026151	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.322497 x 10^-1	159	187	82	169	45.95%	67.33%	346	251	RefGen V2	χ2 p-value for B73 x Mo17: '.1322497' χ2 p-value for Mo17 x B73: '3.99e-08' Biased in favor of strain: ''
GRMZM2G026151	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	4	5	100.00%	55.56%	2	9	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.4795' Biased in favor of strain: ''

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