| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G028183 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.15 x 10-15 | 707 | 161 | 384 | 445 | 81.45% | 53.68% | 868 | 829 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.46e-20' χ2 p-value for Mo17 x B73: '2.15e-15' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028183 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.36 x 10-24 | 626 | 260 | 547 | 260 | 70.65% | 32.22% | 886 | 807 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.52e-35' χ2 p-value for Mo17 x B73: '5.36e-24' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028159 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.16 x 10-14 | 117 | 25 | 125 | 28 | 82.39% | 18.30% | 142 | 153 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.16e-14' χ2 p-value for Mo17 x B73: '4.43e-15' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028159 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.307386 x 10-1 | 29 | 8 | 31 | 12 | 78.38% | 27.91% | 37 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1307386' χ2 p-value for Mo17 x B73: '6.98e-08' Biased in favor of strain: '' |
||||
| GRMZM2G028151 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G028151 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.171851 x 10-1 | 28 | 11 | 21 | 12 | 71.79% | 36.36% | 39 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0064853' χ2 p-value for Mo17 x B73: '.1171851' Biased in favor of strain: '' |
||||
| GRMZM2G028139 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.0912 x 10-3 | 529 | 353 | 493 | 412 | 59.98% | 45.52% | 882 | 905 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.10e-09' χ2 p-value for Mo17 x B73: '.0070912' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028139 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.04 x 10-7 | 748 | 552 | 397 | 1076 | 57.54% | 73.05% | 1300 | 1473 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.91e-12' χ2 p-value for Mo17 x B73: '2.04e-07' Biased in favor of strain: 'Mo17' |
||||
| GRMZM2G028136 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.517162 x 10-1 | 39 | 29 | 33 | 80 | 57.35% | 70.80% | 68 | 113 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1032535' χ2 p-value for Mo17 x B73: '.3517162' Biased in favor of strain: '' |
||||
| GRMZM2G028136 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.850628 x 10-1 | 59 | 62 | 37 | 60 | 48.76% | 61.86% | 121 | 97 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7850628' χ2 p-value for Mo17 x B73: '.019528' Biased in favor of strain: '' |
||||
| GRMZM2G028129 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6998 x 10-3 | 14 | 2 | 4 | 49 | 87.50% | 92.45% | 16 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '6.36e-10' Biased in favor of strain: '' |
||||
| GRMZM2G028129 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 3 | 3 | 93 | 57.14% | 96.88% | 7 | 96 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5929702' χ2 p-value for Mo17 x B73: '3.41e-10' Biased in favor of strain: '' |
|||||
| GRMZM2G028110 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 11 | 0 | 8 | 15.38% | 100.00% | 13 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000877' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
|||||
| GRMZM2G028110 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1978 | 738 | 2975 | 970 | 72.83% | 24.59% | 2716 | 3945 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028108 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.254958 x 10-1 | 38 | 35 | 41 | 19 | 52.05% | 31.67% | 73 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7254958' χ2 p-value for Mo17 x B73: '.0045087' Biased in favor of strain: '' |
||||
| GRMZM2G028108 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.864874 x 10-1 | 18 | 6 | 13 | 5 | 75.00% | 27.78% | 24 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3864874' χ2 p-value for Mo17 x B73: '.0004653' Biased in favor of strain: '' |
||||
| GRMZM2G028096 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.21 x 10-11 | 195 | 27 | 93 | 56 | 87.84% | 37.58% | 222 | 149 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.21e-11' χ2 p-value for Mo17 x B73: '5.05e-14' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028096 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.84 x 10-6 | 130 | 48 | 130 | 66 | 73.03% | 33.67% | 178 | 196 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.94e-10' χ2 p-value for Mo17 x B73: '4.84e-06' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028054 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.477301 x 10-1 | 42 | 45 | 61 | 27 | 48.28% | 30.68% | 87 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7477301' χ2 p-value for Mo17 x B73: '.0002896' Biased in favor of strain: '' |
||||
| GRMZM2G028054 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.53 x 10-6 | 58 | 67 | 99 | 78 | 46.40% | 44.07% | 125 | 177 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.53e-06' χ2 p-value for Mo17 x B73: '1.79e-10' Biased in favor of strain: '' |
||||
| GRMZM2G028046 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G028046 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
||||||
| GRMZM2G028041 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.604578 x 10-1 | 124 | 115 | 166 | 117 | 51.88% | 41.34% | 239 | 283 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5604578' χ2 p-value for Mo17 x B73: '.0035826' Biased in favor of strain: '' |
||||
| GRMZM2G028041 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G028039 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.96785 x 10-2 | 112 | 83 | 39 | 107 | 57.44% | 73.29% | 195 | 146 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.006248' χ2 p-value for Mo17 x B73: '.0896785' Biased in favor of strain: '' |
||||
| GRMZM2G028039 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.643894 x 10-1 | 174 | 166 | 135 | 183 | 51.18% | 57.55% | 340 | 318 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6643894' χ2 p-value for Mo17 x B73: '.0071088' Biased in favor of strain: '' |
||||
| GRMZM2G028037 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.64 x 10-5 | 29 | 4 | 25 | 4 | 87.88% | 13.79% | 33 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000135' χ2 p-value for Mo17 x B73: '.0000964' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028037 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 18 | 0 | 25.00% | 0.00% | 4 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '1.97e-09' Biased in favor of strain: '' |
|||||
| GRMZM2G028036 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.17 x 10-14 | 209 | 77 | 195 | 72 | 73.08% | 26.97% | 286 | 267 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.93e-15' χ2 p-value for Mo17 x B73: '5.17e-14' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028036 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.32 x 10-11 | 125 | 9 | 86 | 51 | 93.28% | 37.23% | 134 | 137 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.32e-11' χ2 p-value for Mo17 x B73: '2.67e-13' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028014 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.635445 x 10-1 | 5 | 5 | 4 | 33 | 50.00% | 89.19% | 10 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2635445' χ2 p-value for Mo17 x B73: '.0036586' Biased in favor of strain: '' |
||||
| GRMZM2G028014 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.4 x 10-9 | 46 | 5 | 59 | 5 | 90.20% | 7.81% | 51 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.40e-09' χ2 p-value for Mo17 x B73: '1.48e-11' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028007 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.39629 x 10-1 | 141 | 115 | 96 | 113 | 55.08% | 54.07% | 256 | 209 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1041626' χ2 p-value for Mo17 x B73: '.239629' Biased in favor of strain: '' |
||||
| GRMZM2G028007 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.349504 x 10-1 | 92 | 50 | 86 | 64 | 64.79% | 42.67% | 142 | 150 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6349504' χ2 p-value for Mo17 x B73: '4.51e-10' Biased in favor of strain: '' |
||||
| GRMZM2G028005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.13 x 10-7 | 113 | 15 | 62 | 26 | 88.28% | 29.55% | 128 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.13e-07' χ2 p-value for Mo17 x B73: '1.50e-13' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.93 x 10-4 | 81 | 41 | 89 | 24 | 66.39% | 21.24% | 122 | 113 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000293' χ2 p-value for Mo17 x B73: '9.67e-10' Biased in favor of strain: 'B73' |
||||
| GRMZM2G028004 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 2 | 3 | 4 | 71.43% | 57.14% | 7 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
|||||
| GRMZM2G028004 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 4 | 3 | 42.86% | 0 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G027995 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 6519 | 1702 | 4045 | 5295 | 79.30% | 56.69% | 8221 | 9340 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027995 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2469 | 1075 | 1848 | 956 | 69.67% | 34.09% | 3544 | 2804 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027991 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.49 x 10-5 | 407 | 272 | 364 | 263 | 59.94% | 41.95% | 679 | 627 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.21e-07' χ2 p-value for Mo17 x B73: '.0000549' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027991 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.15 x 10-11 | 443 | 111 | 230 | 253 | 79.96% | 52.38% | 554 | 483 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.15e-11' χ2 p-value for Mo17 x B73: '2.74e-11' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027976 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 18 | 0 | 0 | 1 | 100.00% | 100.00% | 18 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026999' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
|||||
| GRMZM2G027976 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.97 x 10-20 | 197 | 52 | 234 | 42 | 79.12% | 15.22% | 249 | 276 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.97e-20' χ2 p-value for Mo17 x B73: '6.80e-31' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027972 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.456028 x 10-1 | 18 | 20 | 6 | 17 | 47.37% | 73.91% | 38 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7456028' χ2 p-value for Mo17 x B73: '.0218101' Biased in favor of strain: '' |
||||
| GRMZM2G027972 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.43429 x 10-1 | 78 | 2 | 6 | 15 | 97.50% | 71.43% | 80 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.91e-09' χ2 p-value for Mo17 x B73: '.643429' Biased in favor of strain: '' |
||||
| GRMZM2G027960 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 4 | 0 | 2 | 63.64% | 100.00% | 11 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8311576' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
|||||
| GRMZM2G027960 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 0 | 0 | 75.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G027958 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 5 | 8 | 3 | 44.44% | 27.27% | 9 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.131668' Biased in favor of strain: '' |
|||||
| GRMZM2G027958 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 2 | 5 | 33.33% | 71.43% | 6 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832614' χ2 p-value for Mo17 x B73: '.7892681' Biased in favor of strain: '' |
|||||
| GRMZM2G027955 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 7 | 7 | 100.00% | 50.00% | 3 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.1858767' Biased in favor of strain: '' |
|||||
| GRMZM2G027955 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.679208 x 10-1 | 43 | 50 | 58 | 26 | 46.24% | 30.95% | 93 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4679208' χ2 p-value for Mo17 x B73: '.0004803' Biased in favor of strain: '' |
||||
| GRMZM2G027932 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.853 x 10-4 | 600 | 385 | 522 | 408 | 60.91% | 43.87% | 985 | 930 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.36e-12' χ2 p-value for Mo17 x B73: '.0001853' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027932 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.070657 x 10-1 | 447 | 247 | 285 | 638 | 64.41% | 69.12% | 694 | 923 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2070657' χ2 p-value for Mo17 x B73: '.1134948' Biased in favor of strain: '' |
||||
| GRMZM2G027914 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 1 | 7 | 75.00% | 87.50% | 4 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.2112996' Biased in favor of strain: '' |
|||||
| GRMZM2G027914 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0585 x 10-3 | 247 | 127 | 285 | 212 | 66.04% | 42.66% | 374 | 497 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.47e-10' χ2 p-value for Mo17 x B73: '.0010585' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027891 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 3 | 1 | 25.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
||||||
| GRMZM2G027891 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.040357 x 10-1 | 13 | 2 | 11 | 17 | 86.67% | 60.71% | 15 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1003509' χ2 p-value for Mo17 x B73: '.5040357' Biased in favor of strain: '' |
||||
| GRMZM2G027886 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.937584 x 10-1 | 6 | 5 | 9 | 11 | 54.55% | 55.00% | 11 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3937584' χ2 p-value for Mo17 x B73: '.2683815' Biased in favor of strain: '' |
||||
| GRMZM2G027886 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 4 | 4 | 50.00% | 50.00% | 6 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
|||||
| GRMZM2G027875 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4767 | 3466 | 4226 | 2914 | 57.90% | 40.81% | 8233 | 7140 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027875 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 0.0 | 2955 | 2079 | 3005 | 3842 | 58.70% | 56.11% | 5034 | 6847 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.02e-33' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
||||
| GRMZM2G027860 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.366338 x 10-1 | 299 | 138 | 209 | 292 | 68.42% | 58.28% | 437 | 501 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4366338' χ2 p-value for Mo17 x B73: '.0000688' Biased in favor of strain: '' |
||||
| GRMZM2G027860 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.62946 x 10-2 | 429 | 257 | 412 | 359 | 62.54% | 46.56% | 686 | 771 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.13e-11' χ2 p-value for Mo17 x B73: '.0562946' Biased in favor of strain: '' |
||||
| GRMZM2G027857 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.467 x 10-4 | 88 | 24 | 60 | 28 | 78.57% | 31.82% | 112 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.47e-09' χ2 p-value for Mo17 x B73: '.0006467' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027857 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.074103 x 10-1 | 98 | 50 | 94 | 103 | 66.22% | 52.28% | 148 | 197 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9074103' χ2 p-value for Mo17 x B73: '.0000185' Biased in favor of strain: '' |
||||
| GRMZM2G027856 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.23 x 10-7 | 158 | 28 | 133 | 76 | 84.95% | 36.36% | 186 | 209 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.23e-07' χ2 p-value for Mo17 x B73: '1.50e-20' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027856 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.42 x 10-22 | 346 | 102 | 341 | 130 | 77.23% | 27.60% | 448 | 471 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.54e-31' χ2 p-value for Mo17 x B73: '2.42e-22' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027847 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 1 | 2 | 50.00% | 66.67% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
|||||
| GRMZM2G027847 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 3 | 0 | 100.00% | 0.00% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
|||||
| GRMZM2G027835 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.498521 x 10-1 | 120 | 57 | 86 | 95 | 67.80% | 52.49% | 177 | 181 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7498521' χ2 p-value for Mo17 x B73: '.0000519' Biased in favor of strain: '' |
||||
| GRMZM2G027835 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.21967 x 10-2 | 127 | 88 | 115 | 80 | 59.07% | 41.03% | 215 | 195 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0078192' χ2 p-value for Mo17 x B73: '.0121967' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027825 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.319977 x 10-1 | 87 | 63 | 40 | 30 | 58.00% | 42.86% | 150 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0500435' χ2 p-value for Mo17 x B73: '.2319977' Biased in favor of strain: '' |
||||
| GRMZM2G027825 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.85698 x 10-2 | 284 | 109 | 73 | 89 | 72.26% | 54.94% | 393 | 162 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0185698' χ2 p-value for Mo17 x B73: '.001542' Biased in favor of strain: '' |
||||
| GRMZM2G027821 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.8 x 10-29 | 624 | 100 | 317 | 218 | 86.19% | 40.75% | 724 | 535 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.80e-29' χ2 p-value for Mo17 x B73: '4.73e-37' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027821 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1128 | 327 | 930 | 285 | 77.53% | 23.46% | 1455 | 1215 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027794 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.94564 x 10-2 | 39 | 20 | 35 | 19 | 66.10% | 35.19% | 59 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0133763' χ2 p-value for Mo17 x B73: '.0294564' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027794 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.911817 x 10-1 | 13 | 4 | 22 | 10 | 76.47% | 31.25% | 17 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3911817' χ2 p-value for Mo17 x B73: '.0000214' Biased in favor of strain: '' |
||||
| GRMZM2G027756 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.581372 x 10-1 | 136 | 74 | 92 | 155 | 64.76% | 62.75% | 210 | 247 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5581372' χ2 p-value for Mo17 x B73: '.1919703' Biased in favor of strain: '' |
||||
| GRMZM2G027756 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.43776 x 10-1 | 307 | 253 | 208 | 204 | 54.82% | 49.51% | 560 | 412 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0224943' χ2 p-value for Mo17 x B73: '.843776' Biased in favor of strain: '' |
||||
| GRMZM2G027750 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.882 x 10-3 | 163 | 100 | 131 | 87 | 61.98% | 39.91% | 263 | 218 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001024' χ2 p-value for Mo17 x B73: '.002882' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027750 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 5.04 x 10-19 | 7 | 59 | 47 | 4 | 10.61% | 7.84% | 66 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.40e-22' χ2 p-value for Mo17 x B73: '5.04e-19' Biased in favor of strain: '' |
||||
| GRMZM2G027737 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.144 x 10-3 | 448 | 172 | 260 | 347 | 72.26% | 57.17% | 620 | 607 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.003144' χ2 p-value for Mo17 x B73: '6.86e-07' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027737 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.594 x 10-4 | 418 | 321 | 341 | 235 | 56.56% | 40.80% | 739 | 576 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003594' χ2 p-value for Mo17 x B73: '1.00e-05' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027726 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.824224 x 10-1 | 32 | 5 | 22 | 14 | 86.49% | 38.89% | 37 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.05e-06' χ2 p-value for Mo17 x B73: '.1824224' Biased in favor of strain: '' |
||||
| GRMZM2G027726 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.19 x 10-20 | 274 | 25 | 173 | 42 | 91.64% | 19.53% | 299 | 215 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.19e-20' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027723 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.7756 x 10-3 | 131 | 38 | 140 | 135 | 77.51% | 49.09% | 169 | 275 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0027756' χ2 p-value for Mo17 x B73: '6.30e-10' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027723 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.27 x 10-6 | 463 | 280 | 413 | 285 | 62.31% | 40.83% | 743 | 698 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.90e-11' χ2 p-value for Mo17 x B73: '1.27e-06' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027695 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.016996 x 10-1 | 34 | 26 | 31 | 14 | 56.67% | 31.11% | 60 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3016996' χ2 p-value for Mo17 x B73: '.0112701' Biased in favor of strain: '' |
||||
| GRMZM2G027695 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 0 | 4 | 2 | 100.00% | 33.33% | 11 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
|||||
| GRMZM2G027688 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G027688 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 1 | 0 | 0.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
|||||
| GRMZM2G027683 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.97 x 10-11 | 45 | 0 | 85 | 0 | 100.00% | 0.00% | 45 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.97e-11' χ2 p-value for Mo17 x B73: '2.98e-20' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027683 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G027665 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 7 | 8 | 0 | 30.00% | 0.00% | 10 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
|||||
| GRMZM2G027665 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G027663 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.62 x 10-9 | 235 | 46 | 311 | 30 | 83.63% | 8.80% | 281 | 341 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.62e-09' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027663 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.52 x 10-6 | 25 | 1 | 65 | 2 | 96.15% | 2.99% | 26 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.52e-06' χ2 p-value for Mo17 x B73: '1.40e-14' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027640 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.828 x 10-4 | 84 | 42 | 83 | 41 | 66.67% | 33.06% | 126 | 124 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0001621' Biased in favor of strain: 'B73' |
||||
| GRMZM2G027640 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.45314 x 10-1 | 171 | 77 | 87 | 125 | 68.95% | 58.96% | 248 | 212 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.445314' χ2 p-value for Mo17 x B73: '.017329' Biased in favor of strain: '' |