GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G029543	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.33 x 10^-13	951	291	555	623	76.57%	52.89%	1242	1178	RefGen V2	χ2 p-value for B73 x Mo17: '1.33e-13' χ2 p-value for Mo17 x B73: '1.09e-23' Biased in favor of strain: 'B73'
GRMZM2G029543	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3747	2164	3785	2172	63.39%	36.46%	5911	5957	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G029537	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	3	1	33.33%	25.00%	3	4	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G029537	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	1	4	15	87.50%	78.95%	8	19	RefGen V2	χ2 p-value for B73 x Mo17: '.2113029' χ2 p-value for Mo17 x B73: '.256145' Biased in favor of strain: ''
GRMZM2G029536	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.948864 x 10^-1	5	7	5	8	41.67%	61.54%	12	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0661893' χ2 p-value for Mo17 x B73: '.6948864' Biased in favor of strain: ''
GRMZM2G029536	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.068637 x 10^-1	43	65	26	39	39.81%	60.00%	108	65	RefGen V2	χ2 p-value for B73 x Mo17: '.034264' χ2 p-value for Mo17 x B73: '.1068637' Biased in favor of strain: ''
GRMZM2G029531	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.252529 x 10^-1	16	9	11	6	64.00%	35.29%	25	17	RefGen V2	χ2 p-value for B73 x Mo17: '.1615133' χ2 p-value for Mo17 x B73: '.2252529' Biased in favor of strain: ''
GRMZM2G029531	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.858767 x 10^-1	9	9	7	7	50.00%	50.00%	18	14	RefGen V2	χ2 p-value for B73 x Mo17: '.1336079' χ2 p-value for Mo17 x B73: '.1858767' Biased in favor of strain: ''
GRMZM2G029530	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.061544 x 10^-1	589	356	258	484	62.33%	65.23%	945	742	RefGen V2	χ2 p-value for B73 x Mo17: '.0046632' χ2 p-value for Mo17 x B73: '.4061544' Biased in favor of strain: ''
GRMZM2G029530	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.195384 x 10^-1	197	195	184	238	50.26%	56.40%	392	422	RefGen V2	χ2 p-value for B73 x Mo17: '.9195384' χ2 p-value for Mo17 x B73: '.0085717' Biased in favor of strain: ''
GRMZM2G029527	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.87817 x 10^-2	12	39	9	19	23.53%	67.86%	51	28	RefGen V2	χ2 p-value for B73 x Mo17: '.0001564' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: ''
GRMZM2G029527	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.710998 x 10^-1	8	2	10	13	80.00%	56.52%	10	23	RefGen V2	χ2 p-value for B73 x Mo17: '.3710998' χ2 p-value for Mo17 x B73: '.3020281' Biased in favor of strain: ''
GRMZM2G029518	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G029518	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.456858 x 10^-1	127	184	171	154	40.84%	47.38%	311	325	RefGen V2	χ2 p-value for B73 x Mo17: '.0012285' χ2 p-value for Mo17 x B73: '.3456858' Biased in favor of strain: ''
GRMZM2G029506	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.774686 x 10^-1	16	13	14	7	55.17%	33.33%	29	21	RefGen V2	χ2 p-value for B73 x Mo17: '.5774686' χ2 p-value for Mo17 x B73: '.1266305' Biased in favor of strain: ''
GRMZM2G029506	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G029496	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5654 x 10^-3	0	16	0	20	0.00%	100.00%	16	20	RefGen V2	χ2 p-value for B73 x Mo17: '1.54e-08' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: 'Mo17'
GRMZM2G029496	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.21 x 10^-13	0	55	0	58	0.00%	100.00%	55	58	RefGen V2	χ2 p-value for B73 x Mo17: '1.21e-13' χ2 p-value for Mo17 x B73: '2.62e-14' Biased in favor of strain: 'Mo17'
GRMZM2G029486	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	6	1	8	60.00%	88.89%	15	9	RefGen V2	χ2 p-value for B73 x Mo17: '.438578' χ2 p-value for Mo17 x B73: '.0196307' Biased in favor of strain: ''
GRMZM2G029486	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.083649 x 10^-1	16	13	12	22	55.17%	64.71%	29	34	RefGen V2	χ2 p-value for B73 x Mo17: '.1891512' χ2 p-value for Mo17 x B73: '.8083649' Biased in favor of strain: ''
GRMZM2G029479	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G029479	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.414372 x 10^-1	86	80	71	80	51.81%	52.98%	166	151	RefGen V2	χ2 p-value for B73 x Mo17: '.6414372' χ2 p-value for Mo17 x B73: '.4639186' Biased in favor of strain: ''
GRMZM2G029478	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2490	821	2126	836	75.20%	28.22%	3311	2962	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G029478	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1244	229	766	711	84.45%	48.14%	1473	1477	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G029455	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.170749 x 10^-1	13	1	7	11	92.86%	61.11%	14	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0376363' χ2 p-value for Mo17 x B73: '.6170749' Biased in favor of strain: ''
GRMZM2G029455	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.616799 x 10^-1	19	14	25	22	57.58%	46.81%	33	47	RefGen V2	χ2 p-value for B73 x Mo17: '.3840882' χ2 p-value for Mo17 x B73: '.6616799' Biased in favor of strain: ''
GRMZM2G029396	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.5308 x 10^-3	128	71	114	74	64.32%	39.36%	199	188	RefGen V2	χ2 p-value for B73 x Mo17: '.0000533' χ2 p-value for Mo17 x B73: '.0035308' Biased in favor of strain: 'B73'
GRMZM2G029396	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.15 x 10^-7	106	13	94	17	89.08%	15.32%	119	111	RefGen V2	χ2 p-value for B73 x Mo17: '2.15e-07' χ2 p-value for Mo17 x B73: '1.73e-30' Biased in favor of strain: 'B73'
GRMZM2G029385	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43 x 10^-7	163	147	138	487	52.58%	77.92%	310	625	RefGen V2	χ2 p-value for B73 x Mo17: '1.43e-07' χ2 p-value for Mo17 x B73: '2.40e-09' Biased in favor of strain: 'Mo17'
GRMZM2G029385	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.840857 x 10^-1	73	78	52	125	48.34%	70.62%	151	177	RefGen V2	χ2 p-value for B73 x Mo17: '.6840857' χ2 p-value for Mo17 x B73: '4.09e-08' Biased in favor of strain: ''
GRMZM2G029370	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.48 x 10^-7	595	343	611	448	63.43%	42.30%	938	1059	RefGen V2	χ2 p-value for B73 x Mo17: '1.90e-16' χ2 p-value for Mo17 x B73: '5.48e-07' Biased in favor of strain: 'B73'
GRMZM2G029370	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.57 x 10^-12	1084	359	582	788	75.12%	57.52%	1443	1370	RefGen V2	χ2 p-value for B73 x Mo17: '9.57e-12' χ2 p-value for Mo17 x B73: '6.81e-13' Biased in favor of strain: 'B73'
GRMZM2G029356	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.47 x 10^-21	181	1	183	0	99.45%	0.00%	182	183	RefGen V2	χ2 p-value for B73 x Mo17: '6.47e-21' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G029356	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	735	0	698	1	100.00%	0.14%	735	699	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G029323	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.752335 x 10^-1	47	37	21	33	55.95%	61.11%	84	54	RefGen V2	χ2 p-value for B73 x Mo17: '.2752335' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: ''
GRMZM2G029323	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.034796 x 10^-1	191	113	101	205	62.83%	66.99%	304	306	RefGen V2	χ2 p-value for B73 x Mo17: '.1557461' χ2 p-value for Mo17 x B73: '.9034796' Biased in favor of strain: ''
GRMZM2G029314	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.875554 x 10^-1	17	8	19	11	68.00%	36.67%	25	30	RefGen V2	χ2 p-value for B73 x Mo17: '.8875554' χ2 p-value for Mo17 x B73: '.0004909' Biased in favor of strain: ''
GRMZM2G029314	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	914	136	796	141	87.05%	15.05%	1050	937	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G029307	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.115282 x 10^-1	46	53	41	40	46.46%	49.38%	99	81	RefGen V2	χ2 p-value for B73 x Mo17: '.4817277' χ2 p-value for Mo17 x B73: '.9115282' Biased in favor of strain: ''
GRMZM2G029307	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.151714 x 10^-1	41	14	8	27	74.55%	77.14%	55	35	RefGen V2	χ2 p-value for B73 x Mo17: '.2151714' χ2 p-value for Mo17 x B73: '.1885935' Biased in favor of strain: ''
GRMZM2G029292	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	0	0	100.00%		6	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G029292	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		29	0	0	0	100.00%		29	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G029270	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	5	1	75.00%	16.67%	4	6	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: ''
GRMZM2G029270	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	1	3	100.00%	75.00%	3	4	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: ''
GRMZM2G029262	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1362	157	664	399	89.66%	37.54%	1519	1063	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G029262	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.17 x 10^-26	405	136	380	137	74.86%	26.50%	541	517	RefGen V2	χ2 p-value for B73 x Mo17: '6.18e-31' χ2 p-value for Mo17 x B73: '1.17e-26' Biased in favor of strain: 'B73'
GRMZM2G029243	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.3406 x 10^-3	1	13	3	50	7.14%	94.34%	14	53	RefGen V2	χ2 p-value for B73 x Mo17: '.0013406' χ2 p-value for Mo17 x B73: '1.08e-10' Biased in favor of strain: 'Mo17'
GRMZM2G029243	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.3 x 10^-12	53	83	18	275	38.97%	93.86%	136	293	RefGen V2	χ2 p-value for B73 x Mo17: '7.30e-12' χ2 p-value for Mo17 x B73: '5.45e-23' Biased in favor of strain: 'Mo17'
GRMZM2G029242	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.309232 x 10^-1	50	28	45	73	64.10%	61.86%	78	118	RefGen V2	χ2 p-value for B73 x Mo17: '.6309232' χ2 p-value for Mo17 x B73: '.2684642' Biased in favor of strain: ''
GRMZM2G029242	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.993432 x 10^-1	126	124	110	135	50.40%	55.10%	250	245	RefGen V2	χ2 p-value for B73 x Mo17: '.8993432' χ2 p-value for Mo17 x B73: '.110223' Biased in favor of strain: ''
GRMZM2G029223	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.3704 x 10^-3	116	67	103	65	63.39%	38.69%	183	168	RefGen V2	χ2 p-value for B73 x Mo17: '.0002921' χ2 p-value for Mo17 x B73: '.0033704' Biased in favor of strain: 'B73'
GRMZM2G029223	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.937141 x 10^-1	19	9	24	18	67.86%	42.86%	28	42	RefGen V2	χ2 p-value for B73 x Mo17: '.8937141' χ2 p-value for Mo17 x B73: '.0010631' Biased in favor of strain: ''
GRMZM2G029219	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	3	20	8	62.50%	28.57%	8	28	RefGen V2	χ2 p-value for B73 x Mo17: '.8025764' χ2 p-value for Mo17 x B73: '.000019' Biased in favor of strain: ''
GRMZM2G029219	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.78 x 10^-8	71	7	42	5	91.03%	10.64%	78	47	RefGen V2	χ2 p-value for B73 x Mo17: '4.27e-13' χ2 p-value for Mo17 x B73: '6.78e-08' Biased in favor of strain: 'B73'
GRMZM2G029194	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.00411 x 10^-2	88	57	101	40	60.69%	28.37%	145	141	RefGen V2	χ2 p-value for B73 x Mo17: '.0100411' χ2 p-value for Mo17 x B73: '2.79e-07' Biased in favor of strain: 'B73'
GRMZM2G029194	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.346806 x 10^-1	47	18	29	32	72.31%	52.46%	65	61	RefGen V2	χ2 p-value for B73 x Mo17: '.3346806' χ2 p-value for Mo17 x B73: '.0185761' Biased in favor of strain: ''
GRMZM2G029186	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3182	910	1980	1977	77.76%	49.96%	4092	3957	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G029186	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3673	2147	3470	1991	63.11%	36.46%	5820	5461	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G029153	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G029153	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	2	0	100.00%	0.00%	4	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G029135	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.83 x 10^-9	875	295	481	521	74.79%	52.00%	1170	1002	RefGen V2	χ2 p-value for B73 x Mo17: '3.83e-09' χ2 p-value for Mo17 x B73: '6.77e-23' Biased in favor of strain: 'B73'
GRMZM2G029135	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.803183 x 10^-1	281	153	200	197	64.75%	49.62%	434	397	RefGen V2	χ2 p-value for B73 x Mo17: '8.04e-10' χ2 p-value for Mo17 x B73: '.8803183' Biased in favor of strain: ''
GRMZM2G029113	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.6946 x 10^-3	603	481	617	516	55.63%	45.54%	1084	1133	RefGen V2	χ2 p-value for B73 x Mo17: '.000211' χ2 p-value for Mo17 x B73: '.0026946' Biased in favor of strain: 'B73'
GRMZM2G029113	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.645403 x 10^-1	285	145	171	374	66.28%	68.62%	430	545	RefGen V2	χ2 p-value for B73 x Mo17: '.8645403' χ2 p-value for Mo17 x B73: '.33242' Biased in favor of strain: ''
GRMZM2G029101	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.170749 x 10^-1	21	4	7	11	84.00%	61.11%	25	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0659946' χ2 p-value for Mo17 x B73: '.6170749' Biased in favor of strain: ''
GRMZM2G029101	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.73 x 10^-10	24	92	12	93	20.69%	88.57%	116	105	RefGen V2	χ2 p-value for B73 x Mo17: '2.73e-10' χ2 p-value for Mo17 x B73: '2.68e-15' Biased in favor of strain: 'Mo17'
GRMZM2G029096	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.63071 x 10^-1	43	32	49	42	57.33%	46.15%	75	91	RefGen V2	χ2 p-value for B73 x Mo17: '.2040239' χ2 p-value for Mo17 x B73: '.463071' Biased in favor of strain: ''
GRMZM2G029096	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G029087	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5530	557	2240	896	90.85%	28.57%	6087	3136	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G029087	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	558	18	308	28	96.88%	8.33%	576	336	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G029082	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.03263 x 10^-1	242	289	253	291	45.57%	53.49%	531	544	RefGen V2	χ2 p-value for B73 x Mo17: '.0413876' χ2 p-value for Mo17 x B73: '.103263' Biased in favor of strain: ''
GRMZM2G029082	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.4233 x 10^-3	202	255	135	366	44.20%	73.05%	457	501	RefGen V2	χ2 p-value for B73 x Mo17: '2.25e-24' χ2 p-value for Mo17 x B73: '.0024233' Biased in favor of strain: 'Mo17'
GRMZM2G029065	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.170598 x 10^-1	11	7	28	26	61.11%	48.15%	18	54	RefGen V2	χ2 p-value for B73 x Mo17: '.6170598' χ2 p-value for Mo17 x B73: '.0038924' Biased in favor of strain: ''
GRMZM2G029065	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	24	24	20	24	50.00%	54.55%	48	44	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5464936' Biased in favor of strain: ''
GRMZM2G029058	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.93 x 10^-6	345	171	310	204	66.86%	39.69%	516	514	RefGen V2	χ2 p-value for B73 x Mo17: '1.86e-14' χ2 p-value for Mo17 x B73: '2.93e-06' Biased in favor of strain: 'B73'
GRMZM2G029058	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	3.22 x 10^-5	135	138	104	120	49.45%	53.57%	273	224	RefGen V2	χ2 p-value for B73 x Mo17: '1.60e-09' χ2 p-value for Mo17 x B73: '.0000322' Biased in favor of strain: ''
GRMZM2G029055	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.377593 x 10^-1	49	24	27	55	67.12%	67.07%	73	82	RefGen V2	χ2 p-value for B73 x Mo17: '.9340739' χ2 p-value for Mo17 x B73: '.9377593' Biased in favor of strain: ''
GRMZM2G029055	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.463882 x 10^-1	60	77	45	64	43.80%	58.72%	137	109	RefGen V2	χ2 p-value for B73 x Mo17: '.1463882' χ2 p-value for Mo17 x B73: '.0687788' Biased in favor of strain: ''
GRMZM2G029048	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.547764 x 10^-1	98	73	84	80	57.31%	48.78%	171	164	RefGen V2	χ2 p-value for B73 x Mo17: '.0559021' χ2 p-value for Mo17 x B73: '.7547764' Biased in favor of strain: ''
GRMZM2G029048	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.43 x 10^-7	124	20	89	60	86.11%	40.27%	144	149	RefGen V2	χ2 p-value for B73 x Mo17: '7.43e-07' χ2 p-value for Mo17 x B73: '8.17e-12' Biased in favor of strain: 'B73'
GRMZM2G029039	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.369788 x 10^-1	102	41	70	103	71.33%	59.54%	143	173	RefGen V2	χ2 p-value for B73 x Mo17: '.2369788' χ2 p-value for Mo17 x B73: '.0466865' Biased in favor of strain: ''
GRMZM2G029039	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.029434 x 10^-1	80	102	115	145	43.96%	55.77%	182	260	RefGen V2	χ2 p-value for B73 x Mo17: '.1029434' χ2 p-value for Mo17 x B73: '.0628119' Biased in favor of strain: ''
GRMZM2G029029	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.95 x 10^-5	821	362	539	415	69.40%	43.50%	1183	954	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0000595' Biased in favor of strain: 'B73'
GRMZM2G029029	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3640	625	2205	1908	85.35%	46.39%	4265	4113	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G029027	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.73529 x 10^-2	76	25	52	44	75.25%	45.83%	101	96	RefGen V2	χ2 p-value for B73 x Mo17: '.0673529' χ2 p-value for Mo17 x B73: '.0000149' Biased in favor of strain: ''
GRMZM2G029027	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.51 x 10^-5	71	30	61	22	70.30%	26.51%	101	83	RefGen V2	χ2 p-value for B73 x Mo17: '.0000451' χ2 p-value for Mo17 x B73: '.0000186' Biased in favor of strain: 'B73'
GRMZM2G029001	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.25815 x 10^-2	199	137	209	161	59.23%	43.51%	336	370	RefGen V2	χ2 p-value for B73 x Mo17: '.0007186' χ2 p-value for Mo17 x B73: '.0125815' Biased in favor of strain: 'B73'
GRMZM2G029001	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.206702 x 10^-1	219	130	160	206	62.75%	56.28%	349	366	RefGen V2	χ2 p-value for B73 x Mo17: '.1206702' χ2 p-value for Mo17 x B73: '.0000251' Biased in favor of strain: ''
GRMZM2G029000	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	22	2	100.00%	8.33%	3	24	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '1.34e-09' Biased in favor of strain: ''
GRMZM2G029000	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.3 x 10^-6	29	3	35	4	90.62%	10.26%	32	39	RefGen V2	χ2 p-value for B73 x Mo17: '4.30e-06' χ2 p-value for Mo17 x B73: '6.91e-07' Biased in favor of strain: 'B73'
GRMZM2G028986	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	5	3	1	37.50%	25.00%	8	4	RefGen V2	χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G028986	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	5	0.00%	100.00%	3	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM2G028945	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G028945	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	4	12	2	55.56%	14.29%	9	14	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.0075263' Biased in favor of strain: ''
GRMZM2G028929	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.710934 x 10^-1	44	36	41	32	55.00%	43.84%	80	73	RefGen V2	χ2 p-value for B73 x Mo17: '.3710934' χ2 p-value for Mo17 x B73: '.2921713' Biased in favor of strain: ''
GRMZM2G028929	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.64172 x 10^-2	57	18	47	48	76.00%	50.53%	75	95	RefGen V2	χ2 p-value for B73 x Mo17: '.0864172' χ2 p-value for Mo17 x B73: '.0008463' Biased in favor of strain: ''
GRMZM2G028926	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	1	6	1	90.91%	14.29%	11	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0880834' χ2 p-value for Mo17 x B73: '.0032835' Biased in favor of strain: ''
GRMZM2G028926	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.97 x 10^-9	139	23	108	36	85.80%	25.00%	162	144	RefGen V2	χ2 p-value for B73 x Mo17: '7.95e-20' χ2 p-value for Mo17 x B73: '1.97e-09' Biased in favor of strain: 'B73'
GRMZM2G028921	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.97 x 10^-13	156	48	144	45	76.47%	23.81%	204	189	RefGen V2	χ2 p-value for B73 x Mo17: '3.98e-14' χ2 p-value for Mo17 x B73: '5.97e-13' Biased in favor of strain: 'B73'
GRMZM2G028921	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.9107 x 10^-3	123	34	85	76	78.34%	47.20%	157	161	RefGen V2	χ2 p-value for B73 x Mo17: '.0019107' χ2 p-value for Mo17 x B73: '1.62e-07' Biased in favor of strain: 'B73'

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