| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G030902 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.019999 x 10-1 | 123 | 72 | 92 | 165 | 63.08% | 64.20% | 195 | 257 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2875797' χ2 p-value for Mo17 x B73: '.4019999' Biased in favor of strain: '' |
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| GRMZM2G030902 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.884858 x 10-1 | 345 | 295 | 307 | 286 | 53.91% | 48.23% | 640 | 593 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0481068' χ2 p-value for Mo17 x B73: '.3884858' Biased in favor of strain: '' |
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| GRMZM2G030882 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.885 x 10-4 | 37 | 13 | 53 | 4 | 74.00% | 7.02% | 50 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006885' χ2 p-value for Mo17 x B73: '8.57e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G030882 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 3 | 6 | 25.00% | 66.67% | 4 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G030880 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.694417 x 10-1 | 24 | 17 | 51 | 23 | 58.54% | 31.08% | 41 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2694417' χ2 p-value for Mo17 x B73: '8.37e-11' Biased in favor of strain: '' |
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| GRMZM2G030880 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.26064 x 10-2 | 54 | 31 | 46 | 20 | 63.53% | 30.30% | 85 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0126064' χ2 p-value for Mo17 x B73: '.0013725' Biased in favor of strain: 'B73' |
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| GRMZM2G030877 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173105 x 10-1 | 9 | 15 | 21 | 15 | 37.50% | 41.67% | 24 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206714' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G030877 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G030862 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G030862 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.348797 x 10-1 | 13 | 27 | 18 | 23 | 32.50% | 56.10% | 40 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0268567' χ2 p-value for Mo17 x B73: '.4348797' Biased in favor of strain: '' |
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| GRMZM2G030858 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.004111 x 10-1 | 386 | 310 | 271 | 242 | 55.46% | 47.17% | 696 | 513 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.003967' χ2 p-value for Mo17 x B73: '.2004111' Biased in favor of strain: '' |
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| GRMZM2G030858 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.36549 x 10-2 | 259 | 101 | 183 | 87 | 71.94% | 32.22% | 360 | 270 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0336549' χ2 p-value for Mo17 x B73: '3.29e-33' Biased in favor of strain: '' |
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| GRMZM2G030839 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.214546 x 10-1 | 106 | 51 | 74 | 93 | 67.52% | 55.69% | 157 | 167 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8214546' χ2 p-value for Mo17 x B73: '.0026171' Biased in favor of strain: '' |
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| GRMZM2G030839 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.6403 x 10-3 | 497 | 593 | 473 | 673 | 45.60% | 58.73% | 1090 | 1146 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0036403' χ2 p-value for Mo17 x B73: '3.46e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM2G030831 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.28175 x 10-1 | 905 | 957 | 852 | 932 | 48.60% | 52.24% | 1862 | 1784 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.228175' χ2 p-value for Mo17 x B73: '.0582177' Biased in favor of strain: '' |
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| GRMZM2G030831 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.711697 x 10-1 | 27 | 10 | 29 | 49 | 72.97% | 62.82% | 37 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4158126' χ2 p-value for Mo17 x B73: '.4711697' Biased in favor of strain: '' |
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| GRMZM2G030823 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.1555 x 10-2 | 130 | 48 | 65 | 58 | 73.03% | 47.15% | 178 | 123 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.071555' χ2 p-value for Mo17 x B73: '4.42e-06' Biased in favor of strain: '' |
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| GRMZM2G030823 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.083444 x 10-1 | 94 | 83 | 101 | 85 | 53.11% | 45.70% | 177 | 186 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4083444' χ2 p-value for Mo17 x B73: '.2407249' Biased in favor of strain: '' |
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| GRMZM2G030809 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.055766 x 10-1 | 23 | 31 | 28 | 32 | 42.59% | 53.33% | 54 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2763029' χ2 p-value for Mo17 x B73: '.6055766' Biased in favor of strain: '' |
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| GRMZM2G030809 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.27089 x 10-1 | 13 | 14 | 17 | 28 | 48.15% | 62.22% | 27 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0412237' χ2 p-value for Mo17 x B73: '.527089' Biased in favor of strain: '' |
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| GRMZM2G030805 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.13 x 10-7 | 289 | 76 | 208 | 265 | 79.18% | 56.03% | 365 | 473 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.97e-07' χ2 p-value for Mo17 x B73: '9.13e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G030805 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.53 x 10-6 | 488 | 356 | 396 | 273 | 57.82% | 40.81% | 844 | 669 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.53e-06' χ2 p-value for Mo17 x B73: '1.98e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G030794 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.4155 x 10-3 | 74 | 31 | 66 | 39 | 70.48% | 37.14% | 105 | 105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000271' χ2 p-value for Mo17 x B73: '.0084155' Biased in favor of strain: 'B73' |
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| GRMZM2G030794 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.14216 x 10-1 | 22 | 7 | 11 | 16 | 75.86% | 59.26% | 29 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2935207' χ2 p-value for Mo17 x B73: '.414216' Biased in favor of strain: '' |
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| GRMZM2G030768 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.9754 x 10-3 | 99 | 28 | 84 | 67 | 77.95% | 44.37% | 127 | 151 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0069754' χ2 p-value for Mo17 x B73: '6.18e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G030768 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.33 x 10-9 | 490 | 320 | 422 | 224 | 60.49% | 34.67% | 810 | 646 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.33e-09' χ2 p-value for Mo17 x B73: '6.69e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G030762 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.272594 x 10-1 | 96 | 93 | 78 | 100 | 50.79% | 56.18% | 189 | 178 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8272594' χ2 p-value for Mo17 x B73: '.0991538' Biased in favor of strain: '' |
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| GRMZM2G030762 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.612296 x 10-1 | 141 | 70 | 93 | 130 | 66.82% | 58.30% | 211 | 223 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9612296' χ2 p-value for Mo17 x B73: '.0080093' Biased in favor of strain: '' |
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| GRMZM2G030744 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.9776 x 10-3 | 31 | 4 | 17 | 12 | 88.57% | 41.38% | 35 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0059776' χ2 p-value for Mo17 x B73: '.0038679' Biased in favor of strain: 'B73' |
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| GRMZM2G030744 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.206 x 10-3 | 146 | 102 | 127 | 77 | 58.87% | 37.75% | 248 | 204 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.005206' χ2 p-value for Mo17 x B73: '.000464' Biased in favor of strain: 'B73' |
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| GRMZM2G030731 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.2904 x 10-3 | 22 | 0 | 16 | 4 | 100.00% | 20.00% | 22 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.73e-06' χ2 p-value for Mo17 x B73: '.0072904' Biased in favor of strain: 'B73' |
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| GRMZM2G030731 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.5516 x 10-3 | 17 | 0 | 17 | 1 | 100.00% | 5.56% | 17 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0035516' χ2 p-value for Mo17 x B73: '3.80e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G030727 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 3 | 0.00% | 100.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G030727 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G030717 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.461884 x 10-1 | 6384 | 6278 | 11327 | 13693 | 50.42% | 54.73% | 12662 | 25020 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3461884' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G030717 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | maternally biased | 9.51 x 10-5 | 5692 | 2574 | 1283 | 2924 | 68.86% | 69.50% | 8266 | 4207 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000233' χ2 p-value for Mo17 x B73: '.0000951' Biased in favor of strain: '' |
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| GRMZM2G030688 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.830723 x 10-1 | 17 | 10 | 10 | 16 | 62.96% | 61.54% | 27 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6830723' χ2 p-value for Mo17 x B73: '.5790995' Biased in favor of strain: '' |
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| GRMZM2G030688 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.46 x 10-5 | 2 | 22 | 1 | 20 | 8.33% | 95.24% | 24 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000446' χ2 p-value for Mo17 x B73: '.0000338' Biased in favor of strain: 'Mo17' |
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| GRMZM2G030673 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5 x 10-7 | 261 | 154 | 268 | 117 | 62.89% | 30.39% | 415 | 385 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.50e-07' χ2 p-value for Mo17 x B73: '1.41e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G030673 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.27089 x 10-1 | 12 | 3 | 17 | 28 | 80.00% | 62.22% | 15 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2733281' χ2 p-value for Mo17 x B73: '.527089' Biased in favor of strain: '' |
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| GRMZM2G030646 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 9 | 0 | 14 | 0.00% | 100.00% | 9 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G030646 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.73 x 10-6 | 0 | 23 | 0 | 22 | 0.00% | 100.00% | 23 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.62e-06' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G030636 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.787937 x 10-1 | 22 | 21 | 8 | 12 | 51.16% | 60.00% | 43 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8787937' χ2 p-value for Mo17 x B73: '.3710934' Biased in favor of strain: '' |
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| GRMZM2G030636 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G030628 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 2 | 6 | 2 | 71.43% | 25.00% | 7 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: '' |
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| GRMZM2G030628 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1412 x 10-2 | 30 | 7 | 28 | 12 | 81.08% | 30.00% | 37 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001561' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: 'B73' |
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| GRMZM2G030606 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.463552 x 10-1 | 36 | 40 | 46 | 71 | 47.37% | 60.68% | 76 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6463552' χ2 p-value for Mo17 x B73: '.020819' Biased in favor of strain: '' |
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| GRMZM2G030606 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.359941 x 10-1 | 80 | 21 | 36 | 69 | 79.21% | 65.71% | 101 | 105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0075035' χ2 p-value for Mo17 x B73: '.8359941' Biased in favor of strain: '' |
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| GRMZM2G030598 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 1 | 2 | 50.00% | 66.67% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G030598 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 5 | 4 | 3 | 61.54% | 42.86% | 13 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G030596 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.22 x 10-18 | 1466 | 910 | 1184 | 801 | 61.70% | 40.35% | 2376 | 1985 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.88e-30' χ2 p-value for Mo17 x B73: '8.22e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G030596 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.1174 x 10-3 | 1785 | 792 | 1549 | 1811 | 69.27% | 53.90% | 2577 | 3360 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0051174' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G030594 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.600666 x 10-1 | 43 | 14 | 26 | 34 | 75.44% | 56.67% | 57 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1600666' χ2 p-value for Mo17 x B73: '.1003482' Biased in favor of strain: '' |
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| GRMZM2G030594 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.171851 x 10-1 | 75 | 57 | 63 | 34 | 56.82% | 35.05% | 132 | 97 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1171851' χ2 p-value for Mo17 x B73: '.0032347' Biased in favor of strain: '' |
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| GRMZM2G030578 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1931 | 873 | 1403 | 818 | 68.87% | 36.83% | 2804 | 2221 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.22e-35' Biased in favor of strain: 'B73' |
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| GRMZM2G030578 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 6729 | 1299 | 4355 | 3321 | 83.82% | 43.26% | 8028 | 7676 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G030571 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 4 | 13 | 100.00% | 76.47% | 2 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.3911726' Biased in favor of strain: '' |
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| GRMZM2G030571 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.82 x 10-6 | 38 | 7 | 171 | 28 | 84.44% | 14.07% | 45 | 199 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.82e-06' χ2 p-value for Mo17 x B73: '3.79e-24' Biased in favor of strain: 'B73' |
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| GRMZM2G030567 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630246 x 10-1 | 17 | 19 | 23 | 21 | 47.22% | 47.73% | 36 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: '' |
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| GRMZM2G030567 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G030542 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.11 x 10-10 | 175 | 25 | 114 | 59 | 87.50% | 34.10% | 200 | 173 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.11e-10' χ2 p-value for Mo17 x B73: '1.03e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G030542 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.65 x 10-13 | 127 | 33 | 108 | 24 | 79.38% | 18.18% | 160 | 132 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.07e-13' χ2 p-value for Mo17 x B73: '2.65e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G030529 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.694171 x 10-1 | 33 | 24 | 19 | 18 | 57.89% | 48.65% | 57 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2332302' χ2 p-value for Mo17 x B73: '.8694171' Biased in favor of strain: '' |
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| GRMZM2G030529 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 6.466 x 10-4 | 50 | 49 | 65 | 24 | 50.51% | 26.97% | 99 | 89 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006466' χ2 p-value for Mo17 x B73: '1.94e-15' Biased in favor of strain: '' |
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| GRMZM2G030523 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.86 x 10-25 | 858 | 180 | 647 | 744 | 82.66% | 53.49% | 1038 | 1391 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.31e-28' χ2 p-value for Mo17 x B73: '1.86e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G030523 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.37 x 10-17 | 1809 | 1046 | 1155 | 788 | 63.36% | 40.56% | 2855 | 1943 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '8.37e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G030494 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.850494 x 10-1 | 14 | 6 | 9 | 5 | 70.00% | 35.71% | 20 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0736383' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: '' |
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| GRMZM2G030494 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.876799 x 10-1 | 48 | 19 | 18 | 17 | 71.64% | 48.57% | 67 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3876799' χ2 p-value for Mo17 x B73: '.0231509' Biased in favor of strain: '' |
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| GRMZM2G030465 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.359941 x 10-1 | 45 | 21 | 36 | 69 | 68.18% | 65.71% | 66 | 105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7940317' χ2 p-value for Mo17 x B73: '.8359941' Biased in favor of strain: '' |
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| GRMZM2G030465 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.90495 x 10-2 | 150 | 182 | 40 | 87 | 45.18% | 68.50% | 332 | 127 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0790495' χ2 p-value for Mo17 x B73: '.0000304' Biased in favor of strain: '' |
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| GRMZM2G030463 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 781 | 322 | 762 | 316 | 70.81% | 29.31% | 1103 | 1078 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G030463 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.654 x 10-3 | 413 | 124 | 226 | 350 | 76.91% | 60.76% | 537 | 576 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.79e-07' χ2 p-value for Mo17 x B73: '.002654' Biased in favor of strain: 'B73' |
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| GRMZM2G030436 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.52 x 10-14 | 207 | 2 | 35 | 3 | 99.04% | 7.89% | 209 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.11e-23' χ2 p-value for Mo17 x B73: '1.52e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G030436 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 11 | 0 | 100.00% | 0.00% | 2 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: '' |
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| GRMZM2G030422 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G030422 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 1 | 100.00% | 50.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G030408 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.735 x 10-4 | 723 | 280 | 342 | 417 | 72.08% | 54.94% | 1003 | 759 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002735' χ2 p-value for Mo17 x B73: '7.24e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G030408 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.835305 x 10-1 | 362 | 331 | 428 | 420 | 52.24% | 49.53% | 693 | 848 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2389591' χ2 p-value for Mo17 x B73: '.7835305' Biased in favor of strain: '' |
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| GRMZM2G030402 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1768 | 636 | 1349 | 671 | 73.54% | 33.22% | 2404 | 2020 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G030402 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1859 | 215 | 1094 | 418 | 89.63% | 27.65% | 2074 | 1512 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G030384 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.77 x 10-7 | 79 | 6 | 44 | 22 | 92.94% | 33.33% | 85 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.77e-07' χ2 p-value for Mo17 x B73: '9.22e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G030384 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.11 x 10-10 | 72 | 14 | 46 | 3 | 83.72% | 6.12% | 86 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.99e-10' χ2 p-value for Mo17 x B73: '8.11e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G030350 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.675027 x 10-1 | 99 | 84 | 107 | 187 | 54.10% | 63.61% | 183 | 294 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2675027' χ2 p-value for Mo17 x B73: '3.08e-06' Biased in favor of strain: '' |
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| GRMZM2G030350 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 152 | 278 | 133 | 957 | 35.35% | 87.80% | 430 | 1090 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM2G030312 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.465 x 10-4 | 181 | 185 | 130 | 365 | 49.45% | 73.74% | 366 | 495 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.83e-12' χ2 p-value for Mo17 x B73: '.0008465' Biased in favor of strain: 'Mo17' |
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| GRMZM2G030312 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.800694 x 10-1 | 359 | 381 | 360 | 375 | 48.51% | 51.02% | 740 | 735 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.418667' χ2 p-value for Mo17 x B73: '.5800694' Biased in favor of strain: '' |
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| GRMZM2G030305 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.690428 x 10-1 | 686 | 597 | 611 | 580 | 53.47% | 48.70% | 1283 | 1191 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0129655' χ2 p-value for Mo17 x B73: '.3690428' Biased in favor of strain: '' |
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| GRMZM2G030305 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.198541 x 10-1 | 207 | 108 | 180 | 277 | 65.71% | 60.61% | 315 | 457 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7198541' χ2 p-value for Mo17 x B73: '.0060438' Biased in favor of strain: '' |
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| GRMZM2G030299 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.2 x 10-6 | 273 | 51 | 104 | 108 | 84.26% | 50.94% | 324 | 212 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.85e-11' χ2 p-value for Mo17 x B73: '1.20e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G030299 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.85 x 10-9 | 347 | 141 | 267 | 145 | 71.11% | 35.19% | 488 | 412 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.11e-20' χ2 p-value for Mo17 x B73: '1.85e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G030293 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.158515 x 10-1 | 71 | 30 | 53 | 38 | 70.30% | 41.76% | 101 | 91 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000451' χ2 p-value for Mo17 x B73: '.1158515' Biased in favor of strain: '' |
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| GRMZM2G030293 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.0888 x 10-3 | 74 | 18 | 53 | 58 | 80.43% | 52.25% | 92 | 111 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0050888' χ2 p-value for Mo17 x B73: '.001275' Biased in favor of strain: 'B73' |
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| GRMZM2G030280 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.278156 x 10-1 | 64 | 24 | 43 | 43 | 72.73% | 50.00% | 88 | 86 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2278156' χ2 p-value for Mo17 x B73: '.0010428' Biased in favor of strain: '' |
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| GRMZM2G030280 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.582394 x 10-1 | 72 | 35 | 46 | 49 | 67.29% | 51.58% | 107 | 95 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003477' χ2 p-value for Mo17 x B73: '.7582394' Biased in favor of strain: '' |
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| GRMZM2G030275 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.82221 x 10-2 | 266 | 206 | 219 | 255 | 56.36% | 53.80% | 472 | 474 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0057497' χ2 p-value for Mo17 x B73: '.0982221' Biased in favor of strain: '' |
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| GRMZM2G030275 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.12402 x 10-2 | 824 | 498 | 377 | 869 | 62.33% | 69.74% | 1322 | 1246 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008222' χ2 p-value for Mo17 x B73: '.0212402' Biased in favor of strain: '' |
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| GRMZM2G030272 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G030272 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.6608 x 10-3 | 36 | 8 | 26 | 10 | 81.82% | 27.78% | 44 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000243' χ2 p-value for Mo17 x B73: '.0076608' Biased in favor of strain: 'B73' |
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| GRMZM2G030263 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.049851 x 10-1 | 16 | 24 | 16 | 20 | 40.00% | 55.56% | 40 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.5049851' Biased in favor of strain: '' |
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| GRMZM2G030263 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.928492 x 10-1 | 8 | 12 | 9 | 20 | 40.00% | 68.97% | 20 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0114111' χ2 p-value for Mo17 x B73: '.7928492' Biased in favor of strain: '' |