GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G031607	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.96 x 10^-16	141	29	89	8	82.94%	8.25%	170	97	RefGen V2	χ2 p-value for B73 x Mo17: '8.70e-18' χ2 p-value for Mo17 x B73: '1.96e-16' Biased in favor of strain: 'B73'
GRMZM2G031607	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.11 x 10^-9	86	4	59	22	95.56%	27.16%	90	81	RefGen V2	χ2 p-value for B73 x Mo17: '6.11e-09' χ2 p-value for Mo17 x B73: '4.61e-14' Biased in favor of strain: 'B73'
GRMZM2G031591	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	0.0	60	150	172	79	28.57%	31.47%	210	251	RefGen V2	χ2 p-value for B73 x Mo17: '1.12e-31' χ2 p-value for Mo17 x B73: '2.81e-32' Biased in favor of strain: ''
GRMZM2G031591	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.485063 x 10^-1	108	117	127	103	48.00%	44.78%	225	230	RefGen V2	χ2 p-value for B73 x Mo17: '.5485063' χ2 p-value for Mo17 x B73: '.1135325' Biased in favor of strain: ''
GRMZM2G031588	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.48 x 10^-13	177	58	180	67	75.32%	27.13%	235	247	RefGen V2	χ2 p-value for B73 x Mo17: '8.31e-15' χ2 p-value for Mo17 x B73: '6.48e-13' Biased in favor of strain: 'B73'
GRMZM2G031588	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.21 x 10^-10	171	23	110	49	88.14%	30.82%	194	159	RefGen V2	χ2 p-value for B73 x Mo17: '2.21e-10' χ2 p-value for Mo17 x B73: '8.88e-22' Biased in favor of strain: 'B73'
GRMZM2G031586	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	12415	4254	6213	7403	74.48%	54.37%	16669	13616	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G031586	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.27 x 10^-18	3125	1984	2269	1717	61.17%	43.08%	5109	3986	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.27e-18' Biased in favor of strain: 'B73'
GRMZM2G031580	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.62 x 10^-17	343	155	323	108	68.88%	25.06%	498	431	RefGen V2	χ2 p-value for B73 x Mo17: '3.62e-17' χ2 p-value for Mo17 x B73: '3.92e-25' Biased in favor of strain: 'B73'
GRMZM2G031580	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.52 x 10^-6	35	46	26	135	43.21%	83.85%	81	161	RefGen V2	χ2 p-value for B73 x Mo17: '7.52e-06' χ2 p-value for Mo17 x B73: '3.74e-06' Biased in favor of strain: 'Mo17'
GRMZM2G031572	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	2.52 x 10^-27	652	632	433	419	50.78%	49.18%	1284	852	RefGen V2	χ2 p-value for B73 x Mo17: '1.40e-33' χ2 p-value for Mo17 x B73: '2.52e-27' Biased in favor of strain: ''
GRMZM2G031572	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.01542 x 10^-1	266	247	256	183	51.85%	41.69%	513	439	RefGen V2	χ2 p-value for B73 x Mo17: '.401542' χ2 p-value for Mo17 x B73: '.0004938' Biased in favor of strain: ''
GRMZM2G031568	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	19	19	23	23	50.00%	50.00%	38	46	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G031568	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.483426 x 10^-1	69	24	25	43	74.19%	63.24%	93	68	RefGen V2	χ2 p-value for B73 x Mo17: '.1236203' χ2 p-value for Mo17 x B73: '.5483426' Biased in favor of strain: ''
GRMZM2G031545	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	49100	19783	21974	32668	71.28%	59.79%	68883	54642	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G031545	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	20790	12090	18781	14608	63.23%	43.75%	32880	33389	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G031536	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.63 x 10^-16	86	0	68	0	100.00%	0.00%	86	68	RefGen V2	χ2 p-value for B73 x Mo17: '1.80e-20' χ2 p-value for Mo17 x B73: '1.63e-16' Biased in favor of strain: 'B73'
GRMZM2G031536	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.99 x 10^-8	63	0	27	0	100.00%	0.00%	63	27	RefGen V2	χ2 p-value for B73 x Mo17: '1.99e-08' χ2 p-value for Mo17 x B73: '2.00e-13' Biased in favor of strain: 'B73'
GRMZM2G031529	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.09 x 10^-6	864	233	545	834	78.76%	60.48%	1097	1379	RefGen V2	χ2 p-value for B73 x Mo17: '1.95e-17' χ2 p-value for Mo17 x B73: '1.09e-06' Biased in favor of strain: 'B73'
GRMZM2G031529	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.58 x 10^-14	773	492	636	393	61.11%	38.19%	1265	1029	RefGen V2	χ2 p-value for B73 x Mo17: '2.78e-15' χ2 p-value for Mo17 x B73: '3.58e-14' Biased in favor of strain: 'B73'
GRMZM2G031523	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.969058 x 10^-1	67	58	42	36	53.60%	46.15%	125	78	RefGen V2	χ2 p-value for B73 x Mo17: '.4208286' χ2 p-value for Mo17 x B73: '.4969058' Biased in favor of strain: ''
GRMZM2G031523	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.911494 x 10^-1	42	26	16	22	61.76%	57.89%	68	38	RefGen V2	χ2 p-value for B73 x Mo17: '.3911494' χ2 p-value for Mo17 x B73: '.251349' Biased in favor of strain: ''
GRMZM2G031501	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.54 x 10^-25	888	202	736	565	81.47%	43.43%	1090	1301	RefGen V2	χ2 p-value for B73 x Mo17: '3.54e-25' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G031501	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1262	357	941	299	77.95%	24.11%	1619	1240	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G031496	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3682	2238	3225	2310	62.20%	41.73%	5920	5535	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '9.19e-35' Biased in favor of strain: 'B73'
GRMZM2G031496	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4515	1269	2243	2238	78.06%	49.94%	5784	4481	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G031461	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.99984 x 10^-1	8	4	8	5	66.67%	38.46%	12	13	RefGen V2	χ2 p-value for B73 x Mo17: '.999984' χ2 p-value for Mo17 x B73: '.030984' Biased in favor of strain: ''
GRMZM2G031461	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.513491 x 10^-1	12	7	13	2	63.16%	13.33%	19	15	RefGen V2	χ2 p-value for B73 x Mo17: '.2513491' χ2 p-value for Mo17 x B73: '.0045087' Biased in favor of strain: ''
GRMZM2G031447	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.02 x 10^-5	96	18	34	8	84.21%	19.05%	114	42	RefGen V2	χ2 p-value for B73 x Mo17: '2.77e-13' χ2 p-value for Mo17 x B73: '.0000602' Biased in favor of strain: 'B73'
GRMZM2G031447	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.7435 x 10^-1	13	7	6	9	65.00%	60.00%	20	15	RefGen V2	χ2 p-value for B73 x Mo17: '.87435' χ2 p-value for Mo17 x B73: '.5838823' Biased in favor of strain: ''
GRMZM2G031435	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.885934 x 10^-1	171	106	151	129	61.73%	46.07%	277	280	RefGen V2	χ2 p-value for B73 x Mo17: '.000094' χ2 p-value for Mo17 x B73: '.1885934' Biased in favor of strain: ''
GRMZM2G031435	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.3149 x 10^-3	265	74	145	205	78.17%	58.57%	339	350	RefGen V2	χ2 p-value for B73 x Mo17: '7.01e-06' χ2 p-value for Mo17 x B73: '.0013149' Biased in favor of strain: 'B73'
GRMZM2G031420	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.45 x 10^-5	371	272	400	195	57.70%	32.77%	643	595	RefGen V2	χ2 p-value for B73 x Mo17: '.0000945' χ2 p-value for Mo17 x B73: '4.31e-17' Biased in favor of strain: 'B73'
GRMZM2G031420	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.810012 x 10^-1	319	234	171	329	57.69%	65.80%	553	500	RefGen V2	χ2 p-value for B73 x Mo17: '7.45e-06' χ2 p-value for Mo17 x B73: '.6810012' Biased in favor of strain: ''
GRMZM2G031398	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.95 x 10^-8	608	194	398	402	75.81%	50.25%	802	800	RefGen V2	χ2 p-value for B73 x Mo17: '3.95e-08' χ2 p-value for Mo17 x B73: '6.85e-23' Biased in favor of strain: 'B73'
GRMZM2G031398	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1769 x 10^-3	887	534	744	624	62.42%	45.61%	1421	1368	RefGen V2	χ2 p-value for B73 x Mo17: '7.65e-21' χ2 p-value for Mo17 x B73: '.0011769' Biased in favor of strain: 'B73'
GRMZM2G031370	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.082937 x 10^-1	49	25	45	31	66.22%	40.79%	74	76	RefGen V2	χ2 p-value for B73 x Mo17: '.0052717' χ2 p-value for Mo17 x B73: '.1082937' Biased in favor of strain: ''
GRMZM2G031370	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.26009 x 10^-2	63	9	25	31	87.50%	55.36%	72	56	RefGen V2	χ2 p-value for B73 x Mo17: '.0001769' χ2 p-value for Mo17 x B73: '.0726009' Biased in favor of strain: ''
GRMZM2G031360	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	1	0.00%	100.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G031360	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G031354	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		58	0	0	0	100.00%		58	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G031354	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.3406 x 10^-3	19	3	1	13	86.36%	92.86%	22	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0006467' χ2 p-value for Mo17 x B73: '.0013406' Biased in favor of strain: ''
GRMZM2G031352	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1938 x 10^-3	1483	1182	1299	1153	55.65%	47.02%	2665	2452	RefGen V2	χ2 p-value for B73 x Mo17: '5.52e-09' χ2 p-value for Mo17 x B73: '.0031938' Biased in favor of strain: 'B73'
GRMZM2G031352	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.95 x 10^-6	1402	527	837	1375	72.68%	62.16%	1929	2212	RefGen V2	χ2 p-value for B73 x Mo17: '2.11e-08' χ2 p-value for Mo17 x B73: '6.95e-06' Biased in favor of strain: 'B73'
GRMZM2G031329	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.815113 x 10^-1	4	9	7	6	30.77%	46.15%	13	13	RefGen V2	χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: ''
GRMZM2G031329	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G031326	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.33012 x 10^-2	889	505	390	895	63.77%	69.65%	1394	1285	RefGen V2	χ2 p-value for B73 x Mo17: '.021918' χ2 p-value for Mo17 x B73: '.0233012' Biased in favor of strain: ''
GRMZM2G031326	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.458 x 10^-4	642	525	639	524	55.01%	45.06%	1167	1163	RefGen V2	χ2 p-value for B73 x Mo17: '.000615' χ2 p-value for Mo17 x B73: '.0007458' Biased in favor of strain: 'B73'
GRMZM2G031323	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	4	0	100.00%	0.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G031323	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G031317	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	0	100.00%	0.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G031317	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.9 x 10^-29	194	28	222	36	87.39%	13.95%	222	258	RefGen V2	χ2 p-value for B73 x Mo17: '7.91e-29' χ2 p-value for Mo17 x B73: '5.21e-31' Biased in favor of strain: 'B73'
GRMZM2G031311	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	2	2	0.00%	50.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G031311	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G031280	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.316724 x 10^-1	18	4	17	8	81.82%	32.00%	22	25	RefGen V2	χ2 p-value for B73 x Mo17: '.1316724' χ2 p-value for Mo17 x B73: '.000236' Biased in favor of strain: ''
GRMZM2G031280	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.774686 x 10^-1	16	13	26	4	55.17%	13.33%	29	30	RefGen V2	χ2 p-value for B73 x Mo17: '.5774686' χ2 p-value for Mo17 x B73: '.000059' Biased in favor of strain: ''
GRMZM2G031278	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	9	9	4	10	50.00%	71.43%	18	14	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1088094' Biased in favor of strain: ''
GRMZM2G031278	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G031257	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43065 x 10^-2	24	3	12	4	88.89%	25.00%	27	16	RefGen V2	χ2 p-value for B73 x Mo17: '.0143065' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: ''
GRMZM2G031257	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.572992 x 10^-1	14	4	12	6	77.78%	33.33%	18	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0184221' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G031239	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.2243 x 10^-3	209	138	178	122	60.23%	40.67%	347	300	RefGen V2	χ2 p-value for B73 x Mo17: '.0001381' χ2 p-value for Mo17 x B73: '.0012243' Biased in favor of strain: 'B73'
GRMZM2G031239	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.602934 x 10^-1	188	101	75	94	65.05%	55.62%	289	169	RefGen V2	χ2 p-value for B73 x Mo17: '.5602934' χ2 p-value for Mo17 x B73: '.0023191' Biased in favor of strain: ''
GRMZM2G031210	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.8924 x 10^-3	290	195	132	354	59.79%	72.84%	485	486	RefGen V2	χ2 p-value for B73 x Mo17: '.0013231' χ2 p-value for Mo17 x B73: '.0038924' Biased in favor of strain: 'Mo17'
GRMZM2G031210	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.9142 x 10^-3	481	393	467	357	55.03%	43.33%	874	824	RefGen V2	χ2 p-value for B73 x Mo17: '.0029142' χ2 p-value for Mo17 x B73: '.0001271' Biased in favor of strain: 'B73'
GRMZM2G031204	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4	241	2	207	1.63%	99.04%	245	209	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G031204	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5	118	1	317	4.07%	99.69%	123	318	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '8.41e-36' Biased in favor of strain: 'Mo17'
GRMZM2G031200	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.85 x 10^-6	253	69	67	44	78.57%	39.64%	322	111	RefGen V2	χ2 p-value for B73 x Mo17: '5.85e-06' χ2 p-value for Mo17 x B73: '1.54e-09' Biased in favor of strain: 'B73'
GRMZM2G031200	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	3	0	0	62.50%		8	0	RefGen V2	χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G031169	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.14681 x 10^-2	45	24	36	15	65.22%	29.41%	69	51	RefGen V2	χ2 p-value for B73 x Mo17: '.0114681' χ2 p-value for Mo17 x B73: '.0032759' Biased in favor of strain: 'B73'
GRMZM2G031169	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		25	4	5	4	86.21%	44.44%	29	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0256023' χ2 p-value for Mo17 x B73: '.1572991' Biased in favor of strain: ''
GRMZM2G031156	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	3	6	100.00%	66.67%	4	9	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G031156	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	2	3	100.00%	60.00%	3	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G031138	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.11 x 10^-5	43	166	64	122	20.57%	65.59%	209	186	RefGen V2	χ2 p-value for B73 x Mo17: '1.77e-17' χ2 p-value for Mo17 x B73: '.0000211' Biased in favor of strain: 'Mo17'
GRMZM2G031138	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	2.738 x 10^-4	54	60	45	42	47.37%	48.28%	114	87	RefGen V2	χ2 p-value for B73 x Mo17: '.0000124' χ2 p-value for Mo17 x B73: '.0002738' Biased in favor of strain: ''
GRMZM2G031125	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.3867 x 10^-3	89	24	62	53	78.76%	46.09%	113	115	RefGen V2	χ2 p-value for B73 x Mo17: '.0063867' χ2 p-value for Mo17 x B73: '2.85e-06' Biased in favor of strain: 'B73'
GRMZM2G031125	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.9266 x 10^-3	39	16	47	12	70.91%	20.34%	55	59	RefGen V2	χ2 p-value for B73 x Mo17: '.0019266' χ2 p-value for Mo17 x B73: '5.20e-06' Biased in favor of strain: 'B73'
GRMZM2G031107	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.34 x 10^-20	604	321	505	214	65.30%	29.76%	925	719	RefGen V2	χ2 p-value for B73 x Mo17: '1.34e-20' χ2 p-value for Mo17 x B73: '1.94e-27' Biased in favor of strain: 'B73'
GRMZM2G031107	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.43654 x 10^-2	492	204	355	463	70.69%	56.60%	696	818	RefGen V2	χ2 p-value for B73 x Mo17: '.0243654' χ2 p-value for Mo17 x B73: '1.02e-09' Biased in favor of strain: ''
GRMZM2G031065	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.442465 x 10^-1	86	37	22	75	69.92%	77.32%	123	97	RefGen V2	χ2 p-value for B73 x Mo17: '.4442465' χ2 p-value for Mo17 x B73: '.0260363' Biased in favor of strain: ''
GRMZM2G031065	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.172452 x 10^-1	82	44	59	63	65.08%	51.64%	126	122	RefGen V2	χ2 p-value for B73 x Mo17: '.000711' χ2 p-value for Mo17 x B73: '.7172452' Biased in favor of strain: ''
GRMZM2G031062	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	1	0	100.00%	0.00%	5	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G031062	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G031057	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.34 x 10^-15	296	28	79	38	91.36%	32.48%	324	117	RefGen V2	χ2 p-value for B73 x Mo17: '4.18e-21' χ2 p-value for Mo17 x B73: '4.34e-15' Biased in favor of strain: 'B73'
GRMZM2G031057	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.710934 x 10^-1	38	6	8	12	86.36%	60.00%	44	20	RefGen V2	χ2 p-value for B73 x Mo17: '1.41e-06' χ2 p-value for Mo17 x B73: '.3710934' Biased in favor of strain: ''
GRMZM2G031053	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.08 x 10^-13	418	229	412	217	64.61%	34.50%	647	629	RefGen V2	χ2 p-value for B73 x Mo17: '1.08e-13' χ2 p-value for Mo17 x B73: '7.54e-15' Biased in favor of strain: 'B73'
GRMZM2G031053	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.165293 x 10^-1	383	145	223	391	72.54%	63.68%	528	614	RefGen V2	χ2 p-value for B73 x Mo17: '.0042127' χ2 p-value for Mo17 x B73: '.1165293' Biased in favor of strain: ''
GRMZM2G031043	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.041816 x 10^-1	111	71	135	174	60.99%	56.31%	182	309	RefGen V2	χ2 p-value for B73 x Mo17: '.1041816' χ2 p-value for Mo17 x B73: '.0001126' Biased in favor of strain: ''
GRMZM2G031043	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6676 x 10^-2	213	115	145	107	64.94%	42.46%	328	252	RefGen V2	χ2 p-value for B73 x Mo17: '6.26e-08' χ2 p-value for Mo17 x B73: '.016676' Biased in favor of strain: 'B73'
GRMZM2G031033	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.49 x 10^-9	48	5	83	4	90.57%	4.60%	53	87	RefGen V2	χ2 p-value for B73 x Mo17: '3.49e-09' χ2 p-value for Mo17 x B73: '2.46e-17' Biased in favor of strain: 'B73'
GRMZM2G031033	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6492 x 10^-1	17	4	12	1	80.95%	7.69%	21	13	RefGen V2	χ2 p-value for B73 x Mo17: '.16492' χ2 p-value for Mo17 x B73: '6.46e-06' Biased in favor of strain: ''
GRMZM2G031028	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6 x 10^-19	18	165	14	226	9.84%	94.17%	183	240	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.60e-19' Biased in favor of strain: 'Mo17'
GRMZM2G031028	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.82 x 10^-14	154	321	72	289	32.42%	80.06%	475	361	RefGen V2	χ2 p-value for B73 x Mo17: '1.82e-14' χ2 p-value for Mo17 x B73: '3.28e-30' Biased in favor of strain: 'Mo17'
GRMZM2G031022	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.157067 x 10^-1	481	271	259	433	63.96%	62.57%	752	692	RefGen V2	χ2 p-value for B73 x Mo17: '.1157067' χ2 p-value for Mo17 x B73: '.0223236' Biased in favor of strain: ''
GRMZM2G031022	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0891 x 10^-3	263	197	283	199	57.17%	41.29%	460	482	RefGen V2	χ2 p-value for B73 x Mo17: '.0020891' χ2 p-value for Mo17 x B73: '.0001302' Biased in favor of strain: 'B73'
GRMZM2G031001	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.2801 x 10^-3	162	48	120	97	77.14%	44.70%	210	217	RefGen V2	χ2 p-value for B73 x Mo17: '.0012801' χ2 p-value for Mo17 x B73: '6.69e-12' Biased in favor of strain: 'B73'
GRMZM2G031001	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.486792 x 10^-1	73	55	57	70	57.03%	55.12%	128	127	RefGen V2	χ2 p-value for B73 x Mo17: '.1116118' χ2 p-value for Mo17 x B73: '.2486792' Biased in favor of strain: ''
GRMZM2G030955	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.88869 x 10^-2	190	150	204	172	55.88%	45.74%	340	376	RefGen V2	χ2 p-value for B73 x Mo17: '.0300596' χ2 p-value for Mo17 x B73: '.0988869' Biased in favor of strain: ''
GRMZM2G030955	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.072287 x 10^-1	81	58	45	66	58.27%	59.46%	139	111	RefGen V2	χ2 p-value for B73 x Mo17: '.0357972' χ2 p-value for Mo17 x B73: '.1072287' Biased in favor of strain: ''
GRMZM2G030945	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.795001 x 10^-1	15	3	18	14	83.33%	43.75%	18	32	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G030945	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	0		0.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''

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