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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G14345 ENODL21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.57555'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14345 ENODL21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.383323'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14345 ENODL21 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.32937'
Avg. embryo expression (LCM): '0'
AT5G14345 ENODL21 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14345 ENODL21 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14345 ENODL21 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14340 MYB40 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14340 MYB40 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.422235'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14340 MYB40 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G14340 MYB40 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14340 MYB40 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14340 MYB40 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.95856'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 2 0 0 66.67% 6 0 TAIR8 Avg. embryo expression (dissected): '7.66685'
Avg. embryo expression (LCM): '0'
AT5G14330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14320 EMB3137 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 3 4 2 75.00% 33.33% 12 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.409619'
Avg. expression score for this sample: '605.493'
Avg. expression score in LCM sample: '200.421'
Tissue used: 'pure endosperm, no chalazal'
AT5G14320 EMB3137 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.52437 x 10-1 26 11 42 60 70.27% 58.82% 37 102 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.409619'
Avg. expression score for this sample: '440.527'
Avg. expression score in LCM sample: '200.421'
Tissue used: 'full endosperm'
AT5G14320 EMB3137 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.25177 x 10-1 35 14 5 1 71.43% 16.67% 49 6 TAIR8 Avg. embryo expression (dissected): '1910.94'
Avg. embryo expression (LCM): '1691.5'
AT5G14320 EMB3137 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.39351 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14320 EMB3137 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.72447 x 10-1 19 9 67.86% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14320 EMB3137 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.89669 x 10-1 39 15 72.22% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14310 CXE16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '40.0418'
Avg. expression score in LCM sample: '37.4356'
Tissue used: 'pure endosperm, no chalazal'
AT5G14310 CXE16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 1 5 66.67% 83.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '53.6931'
Avg. expression score in LCM sample: '37.4356'
Tissue used: 'full endosperm'
AT5G14310 CXE16 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '38.6846'
Avg. embryo expression (LCM): '17.3811'
AT5G14310 CXE16 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14310 CXE16 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14310 CXE16 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.16484 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14300 PHB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14300 PHB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.949082'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14300 PHB5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.388131'
Avg. embryo expression (LCM): '0'
AT5G14300 PHB5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14300 PHB5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14300 PHB5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '13.2428'
Tissue used: 'pure endosperm, no chalazal'
AT5G14290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.6698'
Avg. expression score in LCM sample: '13.2428'
Tissue used: 'full endosperm'
AT5G14290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.84652'
Avg. embryo expression (LCM): '0'
AT5G14290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.7802 10 3 5 13 76.92% 72.22% 13 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.037072'
Avg. expression score for this sample: '315.145'
Avg. expression score in LCM sample: '41.9919'
Tissue used: 'pure endosperm, no chalazal'
AT5G14280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6057 x 10-2 15 7 1 33 68.18% 97.06% 22 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.037072'
Avg. expression score for this sample: '233.951'
Avg. expression score in LCM sample: '41.9919'
Tissue used: 'full endosperm'
AT5G14280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.49845 x 10-1 2 7 1 0 22.22% 0.00% 9 1 TAIR8 Avg. embryo expression (dissected): '350.535'
Avg. embryo expression (LCM): '183.066'
AT5G14280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.44153 x 10-1 14 4 77.78% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 76 17 81.72% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.78907 x 10-1 19 8 70.37% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14270 BET9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0653 78 29 22 78 72.90% 78.00% 107 100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000513'
Avg. expression score for this sample: '560.084'
Avg. expression score in LCM sample: '163.485'
Tissue used: 'pure endosperm, no chalazal'
AT5G14270 BET9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.875 x 10-3 108 33 41 143 76.60% 77.72% 141 184 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000513'
Avg. expression score for this sample: '529.281'
Avg. expression score in LCM sample: '163.485'
Tissue used: 'full endosperm'
AT5G14270 BET9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.9186 x 10-2 73 60 18 39 54.89% 68.42% 133 57 TAIR8 Avg. embryo expression (dissected): '569.419'
Avg. embryo expression (LCM): '319.402'
AT5G14270 BET9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 24 7 77.42% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14270 BET9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.28778 x 10-1 195 61 76.17% 256 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14270 BET9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.2 x 10-5 220 29 88.35% 249 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 3 0 100.00% 0.00% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.472548'
Avg. expression score for this sample: '54.3302'
Avg. expression score in LCM sample: '51.1781'
Tissue used: 'pure endosperm, no chalazal'
AT5G14260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 2 3 3 60.00% 50.00% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.472548'
Avg. expression score for this sample: '46.0506'
Avg. expression score in LCM sample: '51.1781'
Tissue used: 'full endosperm'
AT5G14260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 0 4 1 1 0.00% 50.00% 4 2 TAIR8 Avg. embryo expression (dissected): '226.677'
Avg. embryo expression (LCM): '132.38'
AT5G14260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.38346 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.16615 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14250 COP13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 2 6 5 84.62% 45.45% 13 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.296899'
Avg. expression score for this sample: '124.278'
Avg. expression score in LCM sample: '142.202'
Tissue used: 'pure endosperm, no chalazal'
AT5G14250 COP13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.31731 x 10-1 22 7 13 42 75.86% 76.36% 29 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.296899'
Avg. expression score for this sample: '145.496'
Avg. expression score in LCM sample: '142.202'
Tissue used: 'full endosperm'
AT5G14250 COP13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.6047 x 10-2 23 7 0 1 76.67% 100.00% 30 1 TAIR8 Avg. embryo expression (dissected): '179.965'
Avg. embryo expression (LCM): '197.446'
AT5G14250 COP13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.26214 x 10-1 8 7 53.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14250 COP13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5323 x 10-2 108 73 59.67% 181 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14250 COP13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.76768 x 10-1 107 42 71.81% 149 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '243.445'
Avg. expression score in LCM sample: '120.993'
Tissue used: 'pure endosperm, no chalazal'
AT5G14240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '283.467'
Avg. expression score in LCM sample: '120.993'
Tissue used: 'full endosperm'
AT5G14240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '188.279'
Avg. embryo expression (LCM): '205.684'
AT5G14240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.94197 x 10-1 78 54 48 115 59.09% 70.55% 132 163 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.587137'
Avg. expression score for this sample: '333.572'
Avg. expression score in LCM sample: '171.775'
Tissue used: 'pure endosperm, no chalazal'
AT5G14230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.31287 x 10-1 134 66 149 270 67.00% 64.44% 200 419 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.587137'
Avg. expression score for this sample: '235.16'
Avg. expression score in LCM sample: '171.775'
Tissue used: 'full endosperm'
AT5G14230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.50034 x 10-1 18 9 3 2 66.67% 40.00% 27 5 TAIR8 Avg. embryo expression (dissected): '73.071'
Avg. embryo expression (LCM): '49.5687'
AT5G14230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.65704 x 10-1 20 14 58.82% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.63339 x 10-1 7 7 50.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.70869 x 10-1 23 9 71.88% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14220 HEMG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '46.5209'
Avg. expression score in LCM sample: '17.9315'
Tissue used: 'pure endosperm, no chalazal'
AT5G14220 HEMG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '82.1143'
Avg. expression score in LCM sample: '17.9315'
Tissue used: 'full endosperm'
AT5G14220 HEMG2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '84.5936'
Avg. embryo expression (LCM): '56.388'
AT5G14220 HEMG2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14220 HEMG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14220 HEMG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.78551 x 10-1 4 9 2 12 30.77% 85.71% 13 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.863401'
Avg. expression score for this sample: '11.8113'
Avg. expression score in LCM sample: '14.9331'
Tissue used: 'pure endosperm, no chalazal'
AT5G14210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 11 13 3 20 45.83% 86.96% 24 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.863401'
Avg. expression score for this sample: '18.5967'
Avg. expression score in LCM sample: '14.9331'
Tissue used: 'full endosperm'
AT5G14210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.0759 x 10-2 12 22 9 1 35.29% 10.00% 34 10 TAIR8 Avg. embryo expression (dissected): '42.5672'
Avg. embryo expression (LCM): '37.3115'
AT5G14210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.78273 x 10-1 15 4 78.95% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.263 x 10-3 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14200 IMD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.54347'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14200 IMD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.54847'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14200 IMD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.44906'
Avg. embryo expression (LCM): '8.21331'
AT5G14200 IMD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14200 IMD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14200 IMD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14180 MPL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.55323 x 10-1 177 107 131 257 62.32% 66.24% 284 388 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.543423'
Avg. expression score for this sample: '625.992'
Avg. expression score in LCM sample: '211.768'
Tissue used: 'pure endosperm, no chalazal'
AT5G14180 MPL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 126 74 42 105 63.00% 71.43% 200 147 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.543423'
Avg. expression score for this sample: '321.249'
Avg. expression score in LCM sample: '211.768'
Tissue used: 'full endosperm'
AT5G14180 MPL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.96004 x 10-1 5 4 1 7 55.56% 87.50% 9 8 TAIR8 Avg. embryo expression (dissected): '26.1559'
Avg. embryo expression (LCM): '.891659'
AT5G14180 MPL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0526 36 9 80.00% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'