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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G14510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.42452'
Avg. embryo expression (LCM): '1.10515'
AT5G14510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 37 0 100.00% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '97.362'
Avg. expression score in LCM sample: '24.5014'
Tissue used: 'pure endosperm, no chalazal'
AT5G14500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '187.015'
Avg. expression score in LCM sample: '24.5014'
Tissue used: 'full endosperm'
AT5G14500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '115.143'
Avg. embryo expression (LCM): '98.949'
AT5G14500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14495 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14495 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14495 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G14495 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14495 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14495 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14490 NAC085 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14490 NAC085 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.676752'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14490 NAC085 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.26318'
Avg. embryo expression (LCM): '0'
AT5G14490 NAC085 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14490 NAC085 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14490 NAC085 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 3 0 1 25.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '32.117'
Avg. expression score in LCM sample: '54.3382'
Tissue used: 'pure endosperm, no chalazal'
AT5G14480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.11194 x 10-1 3 2 2 11 60.00% 84.62% 5 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '48.1848'
Avg. expression score in LCM sample: '54.3382'
Tissue used: 'full endosperm'
AT5G14480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 3 0 1 25.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '39.9947'
Avg. embryo expression (LCM): '25.3307'
AT5G14480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.31324 x 10-1 25 18 58.14% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.2265 x 10-2 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.18288'
Avg. expression score in LCM sample: '1.11704'
Tissue used: 'pure endosperm, no chalazal'
AT5G14470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.87708'
Avg. expression score in LCM sample: '1.11704'
Tissue used: 'full endosperm'
AT5G14470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.885801'
Avg. embryo expression (LCM): '0'
AT5G14470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '61.4986'
Avg. expression score in LCM sample: '15.3152'
Tissue used: 'pure endosperm, no chalazal'
AT5G14460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '98.8991'
Avg. expression score in LCM sample: '15.3152'
Tissue used: 'full endosperm'
AT5G14460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '127.739'
Avg. embryo expression (LCM): '109.95'
AT5G14460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 38 19 12 22 66.67% 64.71% 57 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.903977'
Avg. expression score for this sample: '108.981'
Avg. expression score in LCM sample: '133.619'
Tissue used: 'pure endosperm, no chalazal'
AT5G14450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.06073 x 10-1 30 2 17 16 93.75% 48.48% 32 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.903977'
Avg. expression score for this sample: '71.7337'
Avg. expression score in LCM sample: '133.619'
Tissue used: 'full endosperm'
AT5G14450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.64994 x 10-1 51 33 8 2 60.71% 20.00% 84 10 TAIR8 Avg. embryo expression (dissected): '183.976'
Avg. embryo expression (LCM): '226.481'
AT5G14450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.3016 x 10-2 3 6 33.33% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6165 x 10-1 4 5 44.44% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.76344 x 10-1 5 4 55.56% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 23 6 10 8 79.31% 44.44% 29 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.500317'
Avg. expression score for this sample: '268.168'
Avg. expression score in LCM sample: '98.3291'
Tissue used: 'pure endosperm, no chalazal'
AT5G14440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.89754 x 10-1 21 13 8 39 61.76% 82.98% 34 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.500317'
Avg. expression score for this sample: '413.762'
Avg. expression score in LCM sample: '98.3291'
Tissue used: 'full endosperm'
AT5G14440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 21 16 4 1 56.76% 20.00% 37 5 TAIR8 Avg. embryo expression (dissected): '389.551'
Avg. embryo expression (LCM): '484.208'
AT5G14440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0777 x 10-2 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0529 21 18 53.85% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.029 x 10-3 45 3 93.75% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.3191 x 10-1 17 5 6 13 77.27% 68.42% 22 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.544587'
Avg. expression score for this sample: '196.159'
Avg. expression score in LCM sample: '104.017'
Tissue used: 'pure endosperm, no chalazal'
AT5G14430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.45179 x 10-1 17 6 12 26 73.91% 68.42% 23 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.544587'
Avg. expression score for this sample: '176.29'
Avg. expression score in LCM sample: '104.017'
Tissue used: 'full endosperm'
AT5G14430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.9193 x 10-2 12 2 1 1 85.71% 50.00% 14 2 TAIR8 Avg. embryo expression (dissected): '150.64'
Avg. embryo expression (LCM): '77.9134'
AT5G14430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.37641 x 10-1 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.08524 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0778 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14420 RGLG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 912 462 635 1282 66.38% 66.88% 1374 1917 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.7e-12'
Avg. expression score for this sample: '1079.94'
Avg. expression score in LCM sample: '781.238'
Tissue used: 'pure endosperm, no chalazal'
AT5G14420 RGLG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-17 2240 979 1036 3219 69.59% 75.65% 3219 4255 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.7e-12'
Avg. expression score for this sample: '1636.61'
Avg. expression score in LCM sample: '781.238'
Tissue used: 'full endosperm'
AT5G14420 RGLG2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.99173 x 10-1 326 338 99 149 49.10% 60.08% 664 248 TAIR8 Avg. embryo expression (dissected): '465.593'
Avg. embryo expression (LCM): '315.384'
AT5G14420 RGLG2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.3 x 10-19 1366 315 81.26% 1681 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14420 RGLG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1096 121 90.06% 1217 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14420 RGLG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2637 315 89.33% 2952 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '32.0615'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 1 1 66.67% 50.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '289.186'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '62.1631'
Avg. embryo expression (LCM): '78.2148'
AT5G14410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.69697 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14400 CYP724A1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.204477'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14400 CYP724A1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14400 CYP724A1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.06915'
Avg. embryo expression (LCM): '1.00469'
AT5G14400 CYP724A1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14400 CYP724A1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14400 CYP724A1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 28 15 7 14 65.12% 66.67% 43 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.537395'
Avg. expression score for this sample: '73.9227'
Avg. expression score in LCM sample: '30.8362'
Tissue used: 'pure endosperm, no chalazal'
AT5G14390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.08913 x 10-1 20 8 15 45 71.43% 75.00% 28 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.537395'
Avg. expression score for this sample: '83.7849'
Avg. expression score in LCM sample: '30.8362'
Tissue used: 'full endosperm'
AT5G14390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.60831 x 10-1 29 29 2 5 50.00% 71.43% 58 7 TAIR8 Avg. embryo expression (dissected): '99.8797'
Avg. embryo expression (LCM): '98.8234'
AT5G14390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.6 x 10-5 33 0 100.00% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2 x 10-8 60 0 100.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14380 AGP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.54622 x 10-1 4 0 9 9 100.00% 50.00% 4 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.78917'
Avg. expression score for this sample: '12.6925'
Avg. expression score in LCM sample: '8.36311'
Tissue used: 'pure endosperm, no chalazal'
AT5G14380 AGP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 2 1 0 71.43% 0.00% 7 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.78917'
Avg. expression score for this sample: '3.83235'
Avg. expression score in LCM sample: '8.36311'
Tissue used: 'full endosperm'
AT5G14380 AGP6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '4.00583'
Avg. embryo expression (LCM): '4.28247'
AT5G14380 AGP6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.19355 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14380 AGP6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14380 AGP6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.03021 x 10-1 69 51 25 107 57.50% 81.06% 120 132 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.274626'
Avg. expression score for this sample: '1543.79'
Avg. expression score in LCM sample: '271.941'
Tissue used: 'pure endosperm, no chalazal'
AT5G14370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.18573 x 10-1 42 23 13 52 64.62% 80.00% 65 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.274626'
Avg. expression score for this sample: '2137.38'
Avg. expression score in LCM sample: '271.941'
Tissue used: 'full endosperm'
AT5G14370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.77536 x 10-1 50 112 24 68 30.86% 73.91% 162 92 TAIR8 Avg. embryo expression (dissected): '2377.57'
Avg. embryo expression (LCM): '1726.21'
AT5G14370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0762 x 10-2 26 3 89.66% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.13099 x 10-1 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.04121 x 10-1 15 5 75.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.11555'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.918739'
Avg. embryo expression (LCM): '0'
AT5G14360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'