Displaying data sets 30701 - 30800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G14660 PDF1B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14660 PDF1B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.4 0 2 1 0 0.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.66494'
Avg. expression score in LCM sample: '.955364'
Tissue used: 'pure endosperm, no chalazal'
AT5G14650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.59482'
Avg. expression score in LCM sample: '.955364'
Tissue used: 'full endosperm'
AT5G14650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 0 0 75.00% 4 0 TAIR8 Avg. embryo expression (dissected): '5.57954'
Avg. embryo expression (LCM): '1.62006'
AT5G14650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.66667 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.96429 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14640 SK13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.08785 x 10-1 44 43 17 52 50.57% 75.36% 87 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.949554'
Avg. expression score for this sample: '142.63'
Avg. expression score in LCM sample: '137.852'
Tissue used: 'pure endosperm, no chalazal'
AT5G14640 SK13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.99585 x 10-1 79 45 81 202 63.71% 71.38% 124 283 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.949554'
Avg. expression score for this sample: '181.869'
Avg. expression score in LCM sample: '137.852'
Tissue used: 'full endosperm'
AT5G14640 SK13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.44253 x 10-1 65 85 20 26 43.33% 56.52% 150 46 TAIR8 Avg. embryo expression (dissected): '289.239'
Avg. embryo expression (LCM): '327.578'
AT5G14640 SK13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.93748 x 10-1 5 6 45.45% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14640 SK13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.745 x 10-3 78 18 81.25% 96 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14640 SK13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.61291 x 10-1 187 76 71.10% 263 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14620 DRM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '147.734'
Avg. expression score in LCM sample: '58.8505'
Tissue used: 'pure endosperm, no chalazal'
AT5G14620 DRM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 3 2 5 57.14% 71.43% 7 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '150.777'
Avg. expression score in LCM sample: '58.8505'
Tissue used: 'full endosperm'
AT5G14620 DRM2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '229.006'
Avg. embryo expression (LCM): '136.976'
AT5G14620 DRM2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14620 DRM2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14620 DRM2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.66348 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 34 13 21 32 72.34% 60.38% 47 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.406808'
Avg. expression score for this sample: '287.82'
Avg. expression score in LCM sample: '88.4374'
Tissue used: 'pure endosperm, no chalazal'
AT5G14610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0164 x 10-1 185 70 121 154 72.55% 56.00% 255 275 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.406808'
Avg. expression score for this sample: '198.403'
Avg. expression score in LCM sample: '88.4374'
Tissue used: 'full endosperm'
AT5G14610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.43979 x 10-1 50 57 16 12 46.73% 42.86% 107 28 TAIR8 Avg. embryo expression (dissected): '523.074'
Avg. embryo expression (LCM): '350.924'
AT5G14610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0487 x 10-2 16 20 44.44% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0 x 10-7 60 4 93.75% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.2 x 10-7 83 11 88.30% 94 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14602 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.598861'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14602 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.384204'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14602 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.667405'
Avg. embryo expression (LCM): '0'
AT5G14602 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14602 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14602 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 2 1 100.00% 33.33% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681659'
Avg. expression score for this sample: '81.1969'
Avg. expression score in LCM sample: '27.3234'
Tissue used: 'pure endosperm, no chalazal'
AT5G14600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.82043 x 10-1 5 0 1 4 100.00% 80.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681659'
Avg. expression score for this sample: '57.0676'
Avg. expression score in LCM sample: '27.3234'
Tissue used: 'full endosperm'
AT5G14600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.96004 x 10-1 5 10 2 0 33.33% 0.00% 15 2 TAIR8 Avg. embryo expression (dissected): '266.945'
Avg. embryo expression (LCM): '275.133'
AT5G14600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.70775 x 10-1 34 12 18 19 73.91% 51.35% 46 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.346235'
Avg. expression score for this sample: '86.9993'
Avg. expression score in LCM sample: '72.299'
Tissue used: 'pure endosperm, no chalazal'
AT5G14590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.00633 x 10-1 56 9 22 44 86.15% 66.67% 65 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.346235'
Avg. expression score for this sample: '96.215'
Avg. expression score in LCM sample: '72.299'
Tissue used: 'full endosperm'
AT5G14590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.40327 x 10-1 33 13 15 10 71.74% 40.00% 46 25 TAIR8 Avg. embryo expression (dissected): '125.865'
Avg. embryo expression (LCM): '127.758'
AT5G14590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.17669 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.74 x 10-4 87 11 88.78% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-7 146 11 92.99% 157 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.5797 x 10-2 24 3 1 10 88.89% 90.91% 27 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.111888'
Avg. expression score for this sample: '35.8462'
Avg. expression score in LCM sample: '8.64237'
Tissue used: 'pure endosperm, no chalazal'
AT5G14580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 10 3 17 50.00% 85.00% 20 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.111888'
Avg. expression score for this sample: '34.6524'
Avg. expression score in LCM sample: '8.64237'
Tissue used: 'full endosperm'
AT5G14580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.61998 x 10-1 16 18 6 2 47.06% 25.00% 34 8 TAIR8 Avg. embryo expression (dissected): '74.09'
Avg. embryo expression (LCM): '157.208'
AT5G14580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.47243 x 10-1 11 6 64.71% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.64104 x 10-1 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14570 NRT2.7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.18809 x 10-1 107 47 57 121 69.48% 67.98% 154 178 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.185178'
Avg. expression score for this sample: '557.388'
Avg. expression score in LCM sample: '72.9017'
Tissue used: 'pure endosperm, no chalazal'
AT5G14570 NRT2.7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.14846 x 10-1 186 76 68 159 70.99% 70.04% 262 227 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.185178'
Avg. expression score for this sample: '358.384'
Avg. expression score in LCM sample: '72.9017'
Tissue used: 'full endosperm'
AT5G14570 NRT2.7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.73246 x 10-1 14 21 4 6 40.00% 60.00% 35 10 TAIR8 Avg. embryo expression (dissected): '145.546'
Avg. embryo expression (LCM): '28.3949'
AT5G14570 NRT2.7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.34024 x 10-1 37 13 74.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14570 NRT2.7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 89 39 69.53% 128 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14570 NRT2.7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-29 369 16 95.84% 385 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14565 MIR398C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.73555 x 10-1 85 49 52 136 63.43% 72.34% 134 188 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.918323'
Avg. expression score for this sample: '502.464'
Avg. expression score in LCM sample: '66.7726'
Tissue used: 'pure endosperm, no chalazal'
AT5G14565 MIR398C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.97169 x 10-1 202 96 86 152 67.79% 63.87% 298 238 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.918323'
Avg. expression score for this sample: '306.28'
Avg. expression score in LCM sample: '66.7726'
Tissue used: 'full endosperm'
AT5G14565 MIR398C embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.39999 x 10-1 15 20 6 8 42.86% 57.14% 35 14 TAIR8 Avg. embryo expression (dissected): '134.717'
Avg. embryo expression (LCM): '35.5659'
AT5G14565 MIR398C endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.77005 x 10-1 44 18 70.97% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14565 MIR398C endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.861 x 10-2 112 39 74.17% 151 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14565 MIR398C endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 372 16 95.88% 388 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.10176'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.85292'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G14560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '37.8028'
Avg. expression score in LCM sample: '17.7404'
Tissue used: 'pure endosperm, no chalazal'
AT5G14550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '62.5937'
Avg. expression score in LCM sample: '17.7404'
Tissue used: 'full endosperm'
AT5G14550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '29.9991'
Avg. embryo expression (LCM): '19.6291'
AT5G14550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14545 MIR398B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.06104'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14545 MIR398B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G14545 MIR398B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G14545 MIR398B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14545 MIR398B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14545 MIR398B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2031.68'
Avg. expression score in LCM sample: '886.417'
Tissue used: 'pure endosperm, no chalazal'
AT5G14540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1250.25'
Avg. expression score in LCM sample: '886.417'
Tissue used: 'full endosperm'
AT5G14540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2488.1'
Avg. embryo expression (LCM): '521.206'
AT5G14540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.92075 x 10-1 3 3 1 0 50.00% 0.00% 6 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '194.454'
Avg. expression score in LCM sample: '87.7613'
Tissue used: 'pure endosperm, no chalazal'
AT5G14530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 3 1 3 75.00% 75.00% 12 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '57.7014'
Avg. expression score in LCM sample: '87.7613'
Tissue used: 'full endosperm'
AT5G14530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '143.369'
Avg. embryo expression (LCM): '101.398'
AT5G14530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.375 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.37471 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9321 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.3728 x 10-1 251 133 112 219 65.36% 66.16% 384 331 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766891'
Avg. expression score for this sample: '259.788'
Avg. expression score in LCM sample: '46.5336'
Tissue used: 'pure endosperm, no chalazal'
AT5G14520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 168 107 72 187 61.09% 72.20% 275 259 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766891'
Avg. expression score for this sample: '175.543'
Avg. expression score in LCM sample: '46.5336'
Tissue used: 'full endosperm'
AT5G14520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.75026 x 10-1 571 501 93 93 53.26% 50.00% 1072 186 TAIR8 Avg. embryo expression (dissected): '632.062'
Avg. embryo expression (LCM): '525.941'
AT5G14520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.87297 x 10-1 44 20 68.75% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.88969 x 10-1 280 134 67.63% 414 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.121 x 10-3 367 128 74.14% 495 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G14510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.72781'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G14510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.45766'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'