GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G036262	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.75 x 10^-11	51	2	48	2	96.23%	4.00%	53	50	RefGen V2	χ2 p-value for B73 x Mo17: '1.69e-11' χ2 p-value for Mo17 x B73: '7.75e-11' Biased in favor of strain: 'B73'
GRMZM2G036262	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		19	2	3	0	90.48%	0.00%	21	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0206383' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G036245	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.2 x 10^-24	0	113	0	202	0.00%	100.00%	113	202	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '9.20e-24' Biased in favor of strain: 'Mo17'
GRMZM2G036245	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.24 x 10^-10	0	39	0	47	0.00%	100.00%	39	47	RefGen V2	χ2 p-value for B73 x Mo17: '4.24e-10' χ2 p-value for Mo17 x B73: '7.10e-12' Biased in favor of strain: 'Mo17'
GRMZM2G036206	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.66 x 10^-11	372	159	300	159	70.06%	34.64%	531	459	RefGen V2	χ2 p-value for B73 x Mo17: '2.39e-20' χ2 p-value for Mo17 x B73: '4.66e-11' Biased in favor of strain: 'B73'
GRMZM2G036206	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.147 x 10^-4	128	31	75	77	80.50%	50.66%	159	152	RefGen V2	χ2 p-value for B73 x Mo17: '.0002147' χ2 p-value for Mo17 x B73: '.0000283' Biased in favor of strain: 'B73'
GRMZM2G036186	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.517565 x 10^-1	267	138	167	229	65.93%	57.83%	405	396	RefGen V2	χ2 p-value for B73 x Mo17: '.7517565' χ2 p-value for Mo17 x B73: '.0001907' Biased in favor of strain: ''
GRMZM2G036186	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.06 x 10^-7	312	173	278	166	64.33%	37.39%	485	444	RefGen V2	χ2 p-value for B73 x Mo17: '2.76e-10' χ2 p-value for Mo17 x B73: '1.06e-07' Biased in favor of strain: 'B73'
GRMZM2G036169	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.25569 x 10^-2	647	584	460	531	52.56%	53.58%	1231	991	RefGen V2	χ2 p-value for B73 x Mo17: '.0725569' χ2 p-value for Mo17 x B73: '.0241089' Biased in favor of strain: ''
GRMZM2G036169	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.297751 x 10^-1	1041	764	533	1154	57.67%	68.41%	1805	1687	RefGen V2	χ2 p-value for B73 x Mo17: '5.25e-16' χ2 p-value for Mo17 x B73: '.1297751' Biased in favor of strain: ''
GRMZM2G036120	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.316008 x 10^-1	32	4	5	12	88.89%	70.59%	36	17	RefGen V2	χ2 p-value for B73 x Mo17: '.004678' χ2 p-value for Mo17 x B73: '.7316008' Biased in favor of strain: ''
GRMZM2G036120	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.97 x 10^-15	394	173	340	163	69.49%	32.41%	567	503	RefGen V2	χ2 p-value for B73 x Mo17: '1.68e-20' χ2 p-value for Mo17 x B73: '2.97e-15' Biased in favor of strain: 'B73'
GRMZM2G036099	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.170751 x 10^-1	7	9	3	11	43.75%	78.57%	16	14	RefGen V2	χ2 p-value for B73 x Mo17: '.6170751' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: ''
GRMZM2G036099	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	0	4	25.00%	100.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G036070	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.79405 x 10^-1	980	537	483	951	64.60%	66.32%	1517	1434	RefGen V2	χ2 p-value for B73 x Mo17: '.0878696' χ2 p-value for Mo17 x B73: '.779405' Biased in favor of strain: ''
GRMZM2G036070	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.501772 x 10^-1	534	488	364	408	52.25%	52.85%	1022	772	RefGen V2	χ2 p-value for B73 x Mo17: '.1501772' χ2 p-value for Mo17 x B73: '.113286' Biased in favor of strain: ''
GRMZM2G036050	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.36 x 10^-6	560	378	477	339	59.70%	41.54%	938	816	RefGen V2	χ2 p-value for B73 x Mo17: '2.81e-09' χ2 p-value for Mo17 x B73: '1.36e-06' Biased in favor of strain: 'B73'
GRMZM2G036050	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.403253 x 10^-1	386	177	246	190	68.56%	43.58%	563	436	RefGen V2	χ2 p-value for B73 x Mo17: '.3403253' χ2 p-value for Mo17 x B73: '1.50e-24' Biased in favor of strain: ''
GRMZM2G036034	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.32 x 10^-8	173	32	117	101	84.39%	46.33%	205	218	RefGen V2	χ2 p-value for B73 x Mo17: '7.32e-08' χ2 p-value for Mo17 x B73: '1.90e-10' Biased in favor of strain: 'B73'
GRMZM2G036034	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.25 x 10^-13	596	359	342	179	62.41%	34.36%	955	521	RefGen V2	χ2 p-value for B73 x Mo17: '1.73e-14' χ2 p-value for Mo17 x B73: '9.25e-13' Biased in favor of strain: 'B73'
GRMZM2G036019	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.09 x 10^-12	417	172	347	186	70.80%	34.90%	589	533	RefGen V2	χ2 p-value for B73 x Mo17: '5.81e-24' χ2 p-value for Mo17 x B73: '3.09e-12' Biased in favor of strain: 'B73'
GRMZM2G036019	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.06 x 10^-6	341	100	222	244	77.32%	52.36%	441	466	RefGen V2	χ2 p-value for B73 x Mo17: '2.06e-06' χ2 p-value for Mo17 x B73: '5.71e-11' Biased in favor of strain: 'B73'
GRMZM2G036007	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.200722 x 10^-1	370	191	188	402	65.95%	68.14%	561	590	RefGen V2	χ2 p-value for B73 x Mo17: '.7200722' χ2 p-value for Mo17 x B73: '.4491169' Biased in favor of strain: ''
GRMZM2G036007	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.88562 x 10^-2	447	384	267	336	53.79%	55.72%	831	603	RefGen V2	χ2 p-value for B73 x Mo17: '.0288562' χ2 p-value for Mo17 x B73: '.0049557' Biased in favor of strain: ''
GRMZM2G035999	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.11 x 10^-9	209	57	149	62	78.57%	29.38%	266	211	RefGen V2	χ2 p-value for B73 x Mo17: '1.17e-20' χ2 p-value for Mo17 x B73: '2.11e-09' Biased in favor of strain: 'B73'
GRMZM2G035999	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.04403 x 10^-2	217	68	78	120	76.14%	60.61%	285	198	RefGen V2	χ2 p-value for B73 x Mo17: '.0006922' χ2 p-value for Mo17 x B73: '.0704403' Biased in favor of strain: ''
GRMZM2G035997	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.2602 x 10^-2	64	7	16	13	90.14%	44.83%	71	29	RefGen V2	χ2 p-value for B73 x Mo17: '.0000272' χ2 p-value for Mo17 x B73: '.012602' Biased in favor of strain: ''
GRMZM2G035997	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.927167 x 10^-1	19	15	21	16	55.88%	43.24%	34	37	RefGen V2	χ2 p-value for B73 x Mo17: '.4927167' χ2 p-value for Mo17 x B73: '.4110798' Biased in favor of strain: ''
GRMZM2G035994	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.6998 x 10^-3	14	2	20	0	87.50%	0.00%	16	20	RefGen V2	χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '7.74e-06' Biased in favor of strain: 'B73'
GRMZM2G035994	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G035992	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	2	0.00%	100.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G035992	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.25 x 10^-14	0	56	1	69	0.00%	98.57%	56	70	RefGen V2	χ2 p-value for B73 x Mo17: '7.25e-14' χ2 p-value for Mo17 x B73: '4.38e-16' Biased in favor of strain: 'Mo17'
GRMZM2G035985	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.959 x 10^-4	570	420	544	431	57.58%	44.21%	990	975	RefGen V2	χ2 p-value for B73 x Mo17: '1.87e-06' χ2 p-value for Mo17 x B73: '.0002959' Biased in favor of strain: 'B73'
GRMZM2G035985	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.44 x 10^-8	481	146	364	389	76.71%	51.66%	627	753	RefGen V2	χ2 p-value for B73 x Mo17: '9.44e-08' χ2 p-value for Mo17 x B73: '2.43e-18' Biased in favor of strain: 'B73'
GRMZM2G035948	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.18 x 10^-5	1327	534	738	1083	71.31%	59.47%	1861	1821	RefGen V2	χ2 p-value for B73 x Mo17: '.0000218' χ2 p-value for Mo17 x B73: '7.41e-11' Biased in favor of strain: 'B73'
GRMZM2G035948	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.43649 x 10^-1	282	200	174	160	58.51%	47.90%	482	334	RefGen V2	χ2 p-value for B73 x Mo17: '.0001877' χ2 p-value for Mo17 x B73: '.443649' Biased in favor of strain: ''
GRMZM2G035944	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.891613 x 10^-1	74	38	34	24	66.07%	41.38%	112	58	RefGen V2	χ2 p-value for B73 x Mo17: '.0006697' χ2 p-value for Mo17 x B73: '.1891613' Biased in favor of strain: ''
GRMZM2G035944	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	953	24	265	4	97.54%	1.49%	977	269	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G035933	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.124226 x 10^-1	46	30	29	63	60.53%	68.48%	76	92	RefGen V2	χ2 p-value for B73 x Mo17: '.2561261' χ2 p-value for Mo17 x B73: '.7124226' Biased in favor of strain: ''
GRMZM2G035933	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.814 x 10^-4	237	133	226	160	64.05%	41.45%	370	386	RefGen V2	χ2 p-value for B73 x Mo17: '6.42e-08' χ2 p-value for Mo17 x B73: '.0007814' Biased in favor of strain: 'B73'
GRMZM2G035928	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G035928	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	3	0.00%	100.00%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G035922	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.87466 x 10^-2	279	230	152	375	54.81%	71.16%	509	527	RefGen V2	χ2 p-value for B73 x Mo17: '1.40e-08' χ2 p-value for Mo17 x B73: '.0287466' Biased in favor of strain: ''
GRMZM2G035922	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.15 x 10^-5	510	365	375	273	58.29%	42.13%	875	648	RefGen V2	χ2 p-value for B73 x Mo17: '9.49e-07' χ2 p-value for Mo17 x B73: '.0000615' Biased in favor of strain: 'B73'
GRMZM2G035899	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.760335 x 10^-1	294	249	260	244	54.14%	48.41%	543	504	RefGen V2	χ2 p-value for B73 x Mo17: '.0534664' χ2 p-value for Mo17 x B73: '.4760335' Biased in favor of strain: ''
GRMZM2G035899	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.53225 x 10^-1	392	209	241	309	65.22%	56.18%	601	550	RefGen V2	χ2 p-value for B73 x Mo17: '.453225' χ2 p-value for Mo17 x B73: '1.83e-07' Biased in favor of strain: ''
GRMZM2G035890	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	10	1		9.09%	0	11	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G035890	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	10	12		54.55%	0	22	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.6698154' Biased in favor of strain: ''
GRMZM2G035853	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.657724 x 10^-1	10	22	17	18	31.25%	51.43%	32	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0338949' χ2 p-value for Mo17 x B73: '.8657724' Biased in favor of strain: ''
GRMZM2G035853	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.572993 x 10^-1	17	31	8	28	35.42%	77.78%	48	36	RefGen V2	χ2 p-value for B73 x Mo17: '4.37e-06' χ2 p-value for Mo17 x B73: '.1572993' Biased in favor of strain: ''
GRMZM2G035849	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.46 x 10^-11	653	563	392	1145	53.70%	74.50%	1216	1537	RefGen V2	χ2 p-value for B73 x Mo17: '8.68e-22' χ2 p-value for Mo17 x B73: '7.46e-11' Biased in favor of strain: 'Mo17'
GRMZM2G035849	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.25666 x 10^-2	390	343	305	360	53.21%	54.14%	733	665	RefGen V2	χ2 p-value for B73 x Mo17: '.0825666' χ2 p-value for Mo17 x B73: '.0329404' Biased in favor of strain: ''
GRMZM2G035848	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.8924 x 10^-3	27	5	21	6	84.38%	22.22%	32	27	RefGen V2	χ2 p-value for B73 x Mo17: '.0001006' χ2 p-value for Mo17 x B73: '.0038924' Biased in favor of strain: 'B73'
GRMZM2G035848	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.49 x 10^-5	174	42	94	53	80.56%	36.05%	216	147	RefGen V2	χ2 p-value for B73 x Mo17: '.0000149' χ2 p-value for Mo17 x B73: '3.45e-15' Biased in favor of strain: 'B73'
GRMZM2G035843	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.305178 x 10^-1	115	69	71	77	62.50%	52.03%	184	148	RefGen V2	χ2 p-value for B73 x Mo17: '.2305178' χ2 p-value for Mo17 x B73: '.0001581' Biased in favor of strain: ''
GRMZM2G035843	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.804803 x 10^-1	101	105	105	84	49.03%	44.44%	206	189	RefGen V2	χ2 p-value for B73 x Mo17: '.7804803' χ2 p-value for Mo17 x B73: '.1266305' Biased in favor of strain: ''
GRMZM2G035821	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.37886 x 10^-1	186	73	109	106	71.81%	49.30%	259	215	RefGen V2	χ2 p-value for B73 x Mo17: '2.20e-12' χ2 p-value for Mo17 x B73: '.837886' Biased in favor of strain: ''
GRMZM2G035821	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.425918 x 10^-1	306	150	255	247	67.11%	49.20%	456	502	RefGen V2	χ2 p-value for B73 x Mo17: '.8425918' χ2 p-value for Mo17 x B73: '1.04e-16' Biased in favor of strain: ''
GRMZM2G035820	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.61 x 10^-5	93	16	49	20	85.32%	28.99%	109	69	RefGen V2	χ2 p-value for B73 x Mo17: '.0000361' χ2 p-value for Mo17 x B73: '3.14e-11' Biased in favor of strain: 'B73'
GRMZM2G035820	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.029 x 10^-4	65	29	40	14	69.15%	25.93%	94	54	RefGen V2	χ2 p-value for B73 x Mo17: '.0002047' χ2 p-value for Mo17 x B73: '.0004029' Biased in favor of strain: 'B73'
GRMZM2G035809	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.75896 x 10^-1	20	21	17	19	48.78%	52.78%	41	36	RefGen V2	χ2 p-value for B73 x Mo17: '.875896' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: ''
GRMZM2G035809	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	3	0	100.00%	0.00%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G035807	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	597	45	428	103	92.99%	19.40%	642	531	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G035807	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	655	63	522	62	91.23%	10.62%	718	584	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G035790	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	9	3	4	43.75%	57.14%	16	7	RefGen V2	χ2 p-value for B73 x Mo17: '.6170751' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: ''
GRMZM2G035790	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.325641 x 10^-1	22	13	12	18	62.86%	60.00%	35	30	RefGen V2	χ2 p-value for B73 x Mo17: '.6325641' χ2 p-value for Mo17 x B73: '.4385779' Biased in favor of strain: ''
GRMZM2G035785	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.8693 x 10^-3	520	205	371	339	71.72%	47.75%	725	710	RefGen V2	χ2 p-value for B73 x Mo17: '.0038693' χ2 p-value for Mo17 x B73: '1.08e-26' Biased in favor of strain: 'B73'
GRMZM2G035785	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	885	347	764	312	71.83%	29.00%	1232	1076	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G035778	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	3	0	100.00%	0.00%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G035778	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		63	0	0	0	100.00%		63	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G035749	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		36	3	2	2	92.31%	50.00%	39	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0006818' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G035749	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.824224 x 10^-1	14	22	23	11	38.89%	32.35%	36	34	RefGen V2	χ2 p-value for B73 x Mo17: '.1824224' χ2 p-value for Mo17 x B73: '.0395918' Biased in favor of strain: ''
GRMZM2G035732	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.85 x 10^-9	21	82	10	90	20.39%	90.00%	103	100	RefGen V2	χ2 p-value for B73 x Mo17: '1.85e-09' χ2 p-value for Mo17 x B73: '1.24e-15' Biased in favor of strain: 'Mo17'
GRMZM2G035732	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.19 x 10^-9	10	98	9	113	9.26%	92.62%	108	122	RefGen V2	χ2 p-value for B73 x Mo17: '1.04e-36' χ2 p-value for Mo17 x B73: '1.19e-09' Biased in favor of strain: 'Mo17'
GRMZM2G035719	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.79051 x 10^-2	458	199	269	389	69.71%	59.12%	657	658	RefGen V2	χ2 p-value for B73 x Mo17: '.0979051' χ2 p-value for Mo17 x B73: '.00004' Biased in favor of strain: ''
GRMZM2G035719	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.23 x 10^-7	391	174	327	205	69.20%	38.53%	565	532	RefGen V2	χ2 p-value for B73 x Mo17: '6.90e-20' χ2 p-value for Mo17 x B73: '1.23e-07' Biased in favor of strain: 'B73'
GRMZM2G035709	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.15922 x 10^-2	142	62	113	81	69.61%	41.75%	204	194	RefGen V2	χ2 p-value for B73 x Mo17: '2.13e-08' χ2 p-value for Mo17 x B73: '.0215922' Biased in favor of strain: 'B73'
GRMZM2G035709	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.22 x 10^-10	258	52	145	105	83.23%	42.00%	310	250	RefGen V2	χ2 p-value for B73 x Mo17: '6.22e-10' χ2 p-value for Mo17 x B73: '1.30e-16' Biased in favor of strain: 'B73'
GRMZM2G035665	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.91453 x 10^-2	171	65	89	96	72.46%	51.89%	236	185	RefGen V2	χ2 p-value for B73 x Mo17: '.0591453' χ2 p-value for Mo17 x B73: '.0000202' Biased in favor of strain: ''
GRMZM2G035665	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.277 x 10^-4	341	189	221	150	64.34%	40.43%	530	371	RefGen V2	χ2 p-value for B73 x Mo17: '4.04e-11' χ2 p-value for Mo17 x B73: '.0002277' Biased in favor of strain: 'B73'
GRMZM2G035664	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.22 x 10^-6	313	108	203	121	74.35%	37.35%	421	324	RefGen V2	χ2 p-value for B73 x Mo17: '1.67e-23' χ2 p-value for Mo17 x B73: '5.22e-06' Biased in favor of strain: 'B73'
GRMZM2G035664	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	434	36	213	98	92.34%	31.51%	470	311	RefGen V2	χ2 p-value for B73 x Mo17: '3.59e-32' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G035651	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.85 x 10^-14	158	9	122	20	94.61%	14.08%	167	142	RefGen V2	χ2 p-value for B73 x Mo17: '1.85e-14' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G035651	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.22 x 10^-14	122	13	93	14	90.37%	13.08%	135	107	RefGen V2	χ2 p-value for B73 x Mo17: '6.52e-21' χ2 p-value for Mo17 x B73: '2.22e-14' Biased in favor of strain: 'B73'
GRMZM2G035632	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.172452 x 10^-1	63	59	76	112	51.64%	59.57%	122	188	RefGen V2	χ2 p-value for B73 x Mo17: '.7172452' χ2 p-value for Mo17 x B73: '.0086504' Biased in favor of strain: ''
GRMZM2G035632	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	2	0	4	77.78%	100.00%	9	4	RefGen V2	χ2 p-value for B73 x Mo17: '.4795075' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G035620	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.76 x 10^-22	891	216	467	439	80.49%	48.45%	1107	906	RefGen V2	χ2 p-value for B73 x Mo17: '1.76e-22' χ2 p-value for Mo17 x B73: '2.95e-31' Biased in favor of strain: 'B73'
GRMZM2G035620	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0 x 10^-30	786	184	562	237	81.03%	29.66%	970	799	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.36e-30' Biased in favor of strain: 'B73'
GRMZM2G035601	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.7478 x 10^-3	114	76	115	79	60.00%	40.72%	190	194	RefGen V2	χ2 p-value for B73 x Mo17: '.0058368' χ2 p-value for Mo17 x B73: '.0097478' Biased in favor of strain: 'B73'
GRMZM2G035601	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.320608 x 10^-1	69	29	41	40	70.41%	49.38%	98	81	RefGen V2	χ2 p-value for B73 x Mo17: '.4320608' χ2 p-value for Mo17 x B73: '.0009674' Biased in favor of strain: ''
GRMZM2G035599	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G035599	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.287333 x 10^-1	15	47	29	34	24.19%	53.97%	62	63	RefGen V2	χ2 p-value for B73 x Mo17: '.0000482' χ2 p-value for Mo17 x B73: '.5287333' Biased in favor of strain: ''
GRMZM2G035595	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.1946 x 10^-3	102	65	105	52	61.08%	33.12%	167	157	RefGen V2	χ2 p-value for B73 x Mo17: '.0041946' χ2 p-value for Mo17 x B73: '.0000234' Biased in favor of strain: 'B73'
GRMZM2G035595	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.67 x 10^-6	95	13	65	20	87.96%	23.53%	108	85	RefGen V2	χ2 p-value for B73 x Mo17: '2.67e-06' χ2 p-value for Mo17 x B73: '3.27e-17' Biased in favor of strain: 'B73'
GRMZM2G035594	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.403719 x 10^-1	40	15	11	32	72.73%	74.42%	55	43	RefGen V2	χ2 p-value for B73 x Mo17: '.3403719' χ2 p-value for Mo17 x B73: '.2808877' Biased in favor of strain: ''
GRMZM2G035594	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.371829 x 10^-1	80	81	81	56	49.69%	40.88%	161	137	RefGen V2	χ2 p-value for B73 x Mo17: '.9371829' χ2 p-value for Mo17 x B73: '.032688' Biased in favor of strain: ''
GRMZM2G035584	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.41 x 10^-5	201	62	142	81	76.43%	36.32%	263	223	RefGen V2	χ2 p-value for B73 x Mo17: '1.02e-17' χ2 p-value for Mo17 x B73: '.0000441' Biased in favor of strain: 'B73'
GRMZM2G035584	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.78 x 10^-6	217	53	224	185	80.37%	45.23%	270	409	RefGen V2	χ2 p-value for B73 x Mo17: '1.78e-06' χ2 p-value for Mo17 x B73: '3.73e-20' Biased in favor of strain: 'B73'
GRMZM2G035574	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	2	4	66.67%	66.67%	6	6	RefGen V2	χ2 p-value for B73 x Mo17: '.9999887' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G035574	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	4	1	2	42.86%	66.67%	7	3	RefGen V2	χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''

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