| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G038217 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.04 x 10-17 | 502 | 104 | 316 | 286 | 82.84% | 47.51% | 606 | 602 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.04e-17' χ2 p-value for Mo17 x B73: '2.03e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G038217 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1232 | 351 | 1099 | 305 | 77.83% | 21.72% | 1583 | 1404 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G038183 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.20887 x 10-2 | 171 | 213 | 149 | 190 | 44.53% | 56.05% | 384 | 339 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0320887' χ2 p-value for Mo17 x B73: '.0259597' Biased in favor of strain: 'Mo17' |
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| GRMZM2G038183 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.425 x 10-4 | 119 | 27 | 150 | 132 | 81.51% | 46.81% | 146 | 282 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001425' χ2 p-value for Mo17 x B73: '1.50e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G038170 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G038170 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 3 | 1 | 100.00% | 25.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G038162 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.650303 x 10-1 | 43 | 35 | 44 | 29 | 55.13% | 39.73% | 78 | 73 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3650303' χ2 p-value for Mo17 x B73: '.0791538' Biased in favor of strain: '' |
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| GRMZM2G038162 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.724768 x 10-1 | 122 | 57 | 60 | 61 | 68.16% | 50.41% | 179 | 121 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6724768' χ2 p-value for Mo17 x B73: '.000149' Biased in favor of strain: '' |
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| GRMZM2G038158 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.083649 x 10-1 | 12 | 7 | 12 | 22 | 63.16% | 64.71% | 19 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7455863' χ2 p-value for Mo17 x B73: '.8083649' Biased in favor of strain: '' |
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| GRMZM2G038158 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.1415 x 10-3 | 221 | 161 | 157 | 95 | 57.85% | 37.70% | 382 | 252 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0021415' χ2 p-value for Mo17 x B73: '.000094' Biased in favor of strain: 'B73' |
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| GRMZM2G038152 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.98954 x 10-2 | 595 | 500 | 451 | 394 | 54.34% | 46.63% | 1095 | 845 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0040932' χ2 p-value for Mo17 x B73: '.0498954' Biased in favor of strain: 'B73' |
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| GRMZM2G038152 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.34 x 10-11 | 852 | 254 | 290 | 346 | 77.03% | 54.40% | 1106 | 636 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.59e-13' χ2 p-value for Mo17 x B73: '5.34e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G038108 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 5 | 100.00% | 62.50% | 4 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.8025872' Biased in favor of strain: '' |
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| GRMZM2G038108 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 2 | 1 | 2 | 66.67% | 66.67% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G038082 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170751 x 10-1 | 7 | 9 | 2 | 13 | 43.75% | 86.67% | 16 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170751' χ2 p-value for Mo17 x B73: '.0045087' Biased in favor of strain: '' |
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| GRMZM2G038082 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 3 | 0 | 100.00% | 0.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G038075 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.141286 x 10-1 | 45 | 25 | 14 | 29 | 64.29% | 67.44% | 70 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6725739' χ2 p-value for Mo17 x B73: '.9141286' Biased in favor of strain: '' |
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| GRMZM2G038075 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.086006 x 10-1 | 29 | 18 | 29 | 7 | 61.70% | 19.44% | 47 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1086006' χ2 p-value for Mo17 x B73: '.0002457' Biased in favor of strain: '' |
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| GRMZM2G038073 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.275985 x 10-1 | 138 | 89 | 106 | 97 | 60.79% | 47.78% | 227 | 203 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001145' χ2 p-value for Mo17 x B73: '.5275985' Biased in favor of strain: '' |
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| GRMZM2G038073 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.27 x 10-8 | 145 | 22 | 115 | 74 | 86.83% | 39.15% | 167 | 189 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.27e-08' χ2 p-value for Mo17 x B73: '1.03e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G038066 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.956305 x 10-1 | 142 | 67 | 70 | 119 | 67.94% | 62.96% | 209 | 189 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6956305' χ2 p-value for Mo17 x B73: '.2800869' Biased in favor of strain: '' |
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| GRMZM2G038066 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.977136 x 10-1 | 84 | 55 | 70 | 67 | 60.43% | 48.91% | 139 | 137 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0139035' χ2 p-value for Mo17 x B73: '.7977136' Biased in favor of strain: '' |
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| GRMZM2G038057 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 9 | 4 | 50.00% | 30.77% | 8 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1655179' Biased in favor of strain: '' |
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| GRMZM2G038057 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G038051 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G038051 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G038032 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 13469 | 678 | 10162 | 374 | 95.21% | 3.55% | 14147 | 10536 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G038032 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 18183 | 217 | 7341 | 302 | 98.82% | 3.95% | 18400 | 7643 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G038028 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G038028 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 3 | 0.00% | 100.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G038019 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.05457 x 10-1 | 21 | 7 | 13 | 15 | 75.00% | 53.57% | 28 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G038019 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G037941 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 8.561 x 10-4 | 3 | 10 | 9 | 1 | 23.08% | 10.00% | 13 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008561' χ2 p-value for Mo17 x B73: '.0001439' Biased in favor of strain: '' |
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| GRMZM2G037941 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 26 | 26 | 24 | 19 | 50.00% | 44.19% | 52 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.4457659' Biased in favor of strain: '' |
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| GRMZM2G037926 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.53 x 10-12 | 385 | 217 | 508 | 244 | 63.95% | 32.45% | 602 | 752 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.53e-12' χ2 p-value for Mo17 x B73: '6.14e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G037926 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.74 x 10-11 | 374 | 86 | 192 | 178 | 81.30% | 48.11% | 460 | 370 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.74e-11' χ2 p-value for Mo17 x B73: '3.66e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G037923 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.00667 x 10-2 | 349 | 146 | 232 | 341 | 70.51% | 59.51% | 495 | 573 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0700667' χ2 p-value for Mo17 x B73: '.0002797' Biased in favor of strain: '' |
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| GRMZM2G037923 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.14 x 10-10 | 281 | 467 | 245 | 410 | 37.57% | 62.60% | 748 | 655 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.04e-11' χ2 p-value for Mo17 x B73: '1.14e-10' Biased in favor of strain: 'Mo17' |
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| GRMZM2G037875 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170751 x 10-1 | 30 | 34 | 21 | 28 | 46.88% | 57.14% | 64 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170751' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G037875 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 11 | 0 | 6 | 31.25% | 100.00% | 16 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026538' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G037865 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 3 | 3 | 13 | 62.50% | 81.25% | 8 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8025764' χ2 p-value for Mo17 x B73: '.215925' Biased in favor of strain: '' |
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| GRMZM2G037865 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.034837 x 10-1 | 74 | 62 | 77 | 50 | 54.41% | 39.37% | 136 | 127 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3034837' χ2 p-value for Mo17 x B73: '.0165813' Biased in favor of strain: '' |
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| GRMZM2G037831 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 5 | 0 | 100.00% | 0.00% | 9 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G037831 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G037823 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.8942 x 10-3 | 340 | 127 | 241 | 299 | 72.81% | 55.37% | 467 | 540 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0048942' χ2 p-value for Mo17 x B73: '2.57e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G037823 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.92479 x 10-2 | 425 | 279 | 322 | 269 | 60.37% | 45.52% | 704 | 591 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.74e-08' χ2 p-value for Mo17 x B73: '.0292479' Biased in favor of strain: 'B73' |
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| GRMZM2G037781 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 8 | 0 | 0.00% | 0 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G037781 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G037743 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 13 | 0 | 6 | 0 | 100.00% | 0.00% | 13 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0107877' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM2G037743 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.2667 x 10-3 | 18 | 0 | 19 | 5 | 100.00% | 20.83% | 18 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.0042667' Biased in favor of strain: 'B73' |
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| GRMZM2G037725 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 1 | 0.00% | 50.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G037725 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 2 | 1 | 50.00% | 33.33% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM2G037698 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 4 | 5 | 8 | 42.86% | 61.54% | 7 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1814437' χ2 p-value for Mo17 x B73: '.6948864' Biased in favor of strain: '' |
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| GRMZM2G037698 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 4 | 5 | 100.00% | 55.56% | 3 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G037685 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 842 | 156 | 1113 | 214 | 84.37% | 16.13% | 998 | 1327 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G037685 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.1898 x 10-3 | 19 | 1 | 10 | 0 | 95.00% | 0.00% | 20 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0071898' χ2 p-value for Mo17 x B73: '7.74e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G037683 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.045716 x 10-1 | 272 | 104 | 96 | 198 | 72.34% | 67.35% | 376 | 294 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0196085' χ2 p-value for Mo17 x B73: '.8045716' Biased in favor of strain: '' |
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| GRMZM2G037683 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.138 x 10-4 | 393 | 292 | 391 | 263 | 57.37% | 40.21% | 685 | 654 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001138' χ2 p-value for Mo17 x B73: '5.58e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G037655 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.32645 x 10-2 | 9 | 3 | 18 | 2 | 75.00% | 10.00% | 12 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0003466' Biased in favor of strain: '' |
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| GRMZM2G037655 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170749 x 10-1 | 26 | 2 | 7 | 11 | 92.86% | 61.11% | 28 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0032836' χ2 p-value for Mo17 x B73: '.6170749' Biased in favor of strain: '' |
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| GRMZM2G037650 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.94 x 10-6 | 206 | 42 | 118 | 130 | 83.06% | 52.42% | 248 | 248 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.30e-08' χ2 p-value for Mo17 x B73: '1.94e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G037650 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 470 | 163 | 460 | 157 | 74.25% | 25.45% | 633 | 617 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.03e-34' χ2 p-value for Mo17 x B73: '3.17e-34' Biased in favor of strain: 'B73' |
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| GRMZM2G037644 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.99 x 10-22 | 501 | 180 | 448 | 200 | 73.57% | 30.86% | 681 | 648 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.97e-35' χ2 p-value for Mo17 x B73: '1.99e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G037644 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.36 x 10-25 | 956 | 224 | 390 | 189 | 81.02% | 32.64% | 1180 | 579 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.36e-25' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G037630 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.63 x 10-6 | 213 | 55 | 147 | 121 | 79.48% | 45.15% | 268 | 268 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.63e-06' χ2 p-value for Mo17 x B73: '7.87e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G037630 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.23 x 10-9 | 433 | 219 | 433 | 274 | 66.41% | 38.76% | 652 | 707 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.25e-17' χ2 p-value for Mo17 x B73: '2.23e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G037627 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.104944 x 10-1 | 76 | 64 | 96 | 68 | 54.29% | 41.46% | 140 | 164 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3104944' χ2 p-value for Mo17 x B73: '.028784' Biased in favor of strain: '' |
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| GRMZM2G037627 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.444787 x 10-1 | 77 | 40 | 83 | 122 | 65.81% | 59.51% | 117 | 205 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8444787' χ2 p-value for Mo17 x B73: '.0297799' Biased in favor of strain: '' |
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| GRMZM2G037624 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.01 x 10-13 | 260 | 40 | 146 | 81 | 86.67% | 35.68% | 300 | 227 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.01e-13' χ2 p-value for Mo17 x B73: '4.05e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G037624 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.59 x 10-11 | 328 | 178 | 352 | 162 | 64.82% | 31.52% | 506 | 514 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.59e-11' χ2 p-value for Mo17 x B73: '5.27e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G037617 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 1 | 100.00% | 33.33% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G037617 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G037614 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.1233 x 10-3 | 391 | 254 | 243 | 311 | 60.62% | 56.14% | 645 | 554 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011233' χ2 p-value for Mo17 x B73: '1.46e-07' Biased in favor of strain: '' |
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| GRMZM2G037614 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.565789 x 10-1 | 479 | 379 | 417 | 426 | 55.83% | 50.53% | 858 | 843 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006403' χ2 p-value for Mo17 x B73: '.7565789' Biased in favor of strain: '' |
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| GRMZM2G037545 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.640453 x 10-1 | 54 | 43 | 83 | 53 | 55.67% | 38.97% | 97 | 136 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2640453' χ2 p-value for Mo17 x B73: '.0100973' Biased in favor of strain: '' |
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| GRMZM2G037545 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G037505 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.70527 x 10-2 | 24 | 22 | 3 | 21 | 52.17% | 87.50% | 46 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0370527' χ2 p-value for Mo17 x B73: '.0303828' Biased in favor of strain: '' |
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| GRMZM2G037505 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.47 x 10-5 | 42 | 88 | 30 | 76 | 32.31% | 71.70% | 130 | 106 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000547' χ2 p-value for Mo17 x B73: '7.90e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G037485 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G037485 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 0 | 0 | 100.00% | 9 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G037478 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 20 | 0 | 4 | 0 | 100.00% | 0.00% | 20 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015655' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G037478 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.270892 x 10-1 | 4 | 6 | 9 | 4 | 40.00% | 30.77% | 10 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.1655179' Biased in favor of strain: '' |
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| GRMZM2G037472 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.53 x 10-25 | 643 | 319 | 575 | 270 | 66.84% | 31.95% | 962 | 845 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.53e-25' χ2 p-value for Mo17 x B73: '9.37e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G037472 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2375 | 114 | 1049 | 257 | 95.42% | 19.68% | 2489 | 1306 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G037469 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 7.38 x 10-8 | 37 | 55 | 59 | 35 | 40.22% | 37.23% | 92 | 94 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.38e-08' χ2 p-value for Mo17 x B73: '1.42e-09' Biased in favor of strain: '' |
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| GRMZM2G037469 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.407384 x 10-1 | 105 | 76 | 109 | 116 | 58.01% | 51.56% | 181 | 225 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0311186' χ2 p-value for Mo17 x B73: '.6407384' Biased in favor of strain: '' |
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| GRMZM2G037444 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.016719 x 10-1 | 565 | 498 | 486 | 447 | 53.15% | 47.91% | 1063 | 933 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0398807' χ2 p-value for Mo17 x B73: '.2016719' Biased in favor of strain: '' |
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| GRMZM2G037444 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.46737 x 10-2 | 224 | 88 | 151 | 199 | 71.79% | 56.86% | 312 | 350 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0546737' χ2 p-value for Mo17 x B73: '.000099' Biased in favor of strain: '' |
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| GRMZM2G037431 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.6588 x 10-3 | 33 | 4 | 20 | 5 | 89.19% | 20.00% | 37 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0036588' χ2 p-value for Mo17 x B73: '7.43e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G037431 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.12 x 10-12 | 646 | 312 | 534 | 331 | 67.43% | 38.27% | 958 | 865 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.79e-27' χ2 p-value for Mo17 x B73: '5.12e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G037422 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.97702 x 10-1 | 122 | 120 | 28 | 37 | 50.41% | 56.92% | 242 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.897702' χ2 p-value for Mo17 x B73: '.2642883' Biased in favor of strain: '' |
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| GRMZM2G037422 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.398926 x 10-1 | 28 | 11 | 17 | 32 | 71.79% | 65.31% | 39 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4969231' χ2 p-value for Mo17 x B73: '.8398926' Biased in favor of strain: '' |
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| GRMZM2G037411 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 6.65 x 10-6 | 1638 | 1072 | 708 | 1142 | 60.44% | 61.73% | 2710 | 1850 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.27e-12' χ2 p-value for Mo17 x B73: '6.65e-06' Biased in favor of strain: '' |
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| GRMZM2G037411 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.618044 x 10-1 | 123 | 58 | 65 | 67 | 67.96% | 50.76% | 181 | 132 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.36e-06' χ2 p-value for Mo17 x B73: '.8618044' Biased in favor of strain: '' |
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| GRMZM2G037386 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.126221 x 10-1 | 40 | 33 | 24 | 44 | 54.79% | 64.71% | 73 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4126221' χ2 p-value for Mo17 x B73: '.0152934' Biased in favor of strain: '' |
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| GRMZM2G037386 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 6 | 85.71% | 0 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G037378 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.569704 x 10-1 | 184 | 79 | 122 | 161 | 69.96% | 56.89% | 263 | 283 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2569704' χ2 p-value for Mo17 x B73: '.0004853' Biased in favor of strain: '' |
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| GRMZM2G037378 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.81 x 10-5 | 175 | 108 | 204 | 118 | 61.84% | 36.65% | 283 | 322 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000681' χ2 p-value for Mo17 x B73: '1.65e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G037368 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1400 | 615 | 1674 | 667 | 69.48% | 28.49% | 2015 | 2341 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G037368 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 0.0 | 85 | 176 | 469 | 3 | 32.57% | 0.64% | 261 | 472 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.50e-31' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |