Displaying data sets 30201 - 30300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G15480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '1.09692'
Avg. embryo expression (LCM): '0'
AT5G15480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15470 GAUT14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 5.2 x 10-6 54 3 3 32 94.74% 91.43% 57 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.5e-08'
Avg. expression score for this sample: '108.513'
Avg. expression score in LCM sample: '62.9953'
Tissue used: 'pure endosperm, no chalazal'
AT5G15470 GAUT14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 6.82 x 10-4 80 8 18 53 90.91% 74.65% 88 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.5e-08'
Avg. expression score for this sample: '129.995'
Avg. expression score in LCM sample: '62.9953'
Tissue used: 'full endosperm'
AT5G15470 GAUT14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.23036 x 10-1 15 15 3 7 50.00% 70.00% 30 10 TAIR8 Avg. embryo expression (dissected): '77.2419'
Avg. embryo expression (LCM): '49.9455'
AT5G15470 GAUT14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.76544 x 10-1 14 4 77.78% 18 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G15470 GAUT14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.8816 x 10-2 274 24 91.95% 298 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G15470 GAUT14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0 x 10-5 392 16 96.08% 408 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G15460 MUB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.60646 x 10-1 25 12 14 20 67.57% 58.82% 37 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.392381'
Avg. expression score for this sample: '91.1686'
Avg. expression score in LCM sample: '77.1494'
Tissue used: 'pure endosperm, no chalazal'
AT5G15460 MUB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.40293 x 10-1 50 13 20 50 79.37% 71.43% 63 70 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.392381'
Avg. expression score for this sample: '137.604'
Avg. expression score in LCM sample: '77.1494'
Tissue used: 'full endosperm'
AT5G15460 MUB2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.52857 x 10-1 28 32 16 13 46.67% 44.83% 60 29 TAIR8 Avg. embryo expression (dissected): '179.668'
Avg. embryo expression (LCM): '191.179'
AT5G15460 MUB2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.93618 x 10-1 17 3 85.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15460 MUB2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.42581 x 10-1 42 15 73.68% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15460 MUB2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.225 x 10-3 108 17 86.40% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15450 CLPB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.617 x 10-3 307 107 92 240 74.15% 72.29% 414 332 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.8e-18'
Avg. expression score for this sample: '462.742'
Avg. expression score in LCM sample: '123.992'
Tissue used: 'pure endosperm, no chalazal'
AT5G15450 CLPB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.8 x 10-20 555 69 119 380 88.94% 76.15% 624 499 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.8e-18'
Avg. expression score for this sample: '471.014'
Avg. expression score in LCM sample: '123.992'
Tissue used: 'full endosperm'
AT5G15450 CLPB3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4153 x 10-1 119 73 59 50 61.98% 45.87% 192 109 TAIR8 Avg. embryo expression (dissected): '370.536'
Avg. embryo expression (LCM): '199.631'
AT5G15450 CLPB3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.44049 x 10-1 138 34 80.23% 172 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15450 CLPB3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.432 x 10-3 197 77 71.90% 274 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15450 CLPB3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-30 511 12 97.71% 523 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15440 EDL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 1 7 4 88.89% 36.36% 9 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '89.8787'
Avg. expression score in LCM sample: '41.8744'
Tissue used: 'pure endosperm, no chalazal'
AT5G15440 EDL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.73701 x 10-1 38 10 18 25 79.17% 58.14% 48 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '116.437'
Avg. expression score in LCM sample: '41.8744'
Tissue used: 'full endosperm'
AT5G15440 EDL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.46965 x 10-1 8 2 2 0 80.00% 0.00% 10 2 TAIR8 Avg. embryo expression (dissected): '59.0025'
Avg. embryo expression (LCM): '52.7711'
AT5G15440 EDL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.31147 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15440 EDL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.20865 x 10-1 21 14 60.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15440 EDL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.8441 x 10-2 55 14 79.71% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 2 1 33.33% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.352023'
Avg. expression score for this sample: '3.62852'
Avg. expression score in LCM sample: '1.57268'
Tissue used: 'pure endosperm, no chalazal'
AT5G15430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.02211 x 10-1 8 3 0 13 72.73% 100.00% 11 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.352023'
Avg. expression score for this sample: '13.4882'
Avg. expression score in LCM sample: '1.57268'
Tissue used: 'full endosperm'
AT5G15430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 3 1 1 62.50% 50.00% 8 2 TAIR8 Avg. embryo expression (dissected): '6.30019'
Avg. embryo expression (LCM): '0'
AT5G15430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.42523'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G15420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.600093'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G15420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G15420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15410 DND1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.6083 x 10-2 142 62 37 135 69.61% 78.49% 204 172 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014201'
Avg. expression score for this sample: '278.935'
Avg. expression score in LCM sample: '62.6572'
Tissue used: 'pure endosperm, no chalazal'
AT5G15410 DND1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.70552 x 10-1 77 54 36 153 58.78% 80.95% 131 189 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014201'
Avg. expression score for this sample: '204.625'
Avg. expression score in LCM sample: '62.6572'
Tissue used: 'full endosperm'
AT5G15410 DND1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.88783 x 10-1 144 128 74 63 52.94% 45.99% 272 137 TAIR8 Avg. embryo expression (dissected): '496.679'
Avg. embryo expression (LCM): '115.238'
AT5G15410 DND1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.35075 x 10-1 32 6 84.21% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15410 DND1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.3 x 10-5 131 17 88.51% 148 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15410 DND1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4 x 10-19 241 8 96.79% 249 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 6 66.67% 85.71% 3 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.303069'
Avg. expression score for this sample: '96.6548'
Avg. expression score in LCM sample: '65.3322'
Tissue used: 'pure endosperm, no chalazal'
AT5G15400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.4055 x 10-1 33 9 18 40 78.57% 68.97% 42 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.303069'
Avg. expression score for this sample: '153.922'
Avg. expression score in LCM sample: '65.3322'
Tissue used: 'full endosperm'
AT5G15400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 2 2 1 71.43% 33.33% 7 3 TAIR8 Avg. embryo expression (dissected): '121.17'
Avg. embryo expression (LCM): '104.801'
AT5G15400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.68225 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.46489 x 10-1 99 29 77.34% 128 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3846 x 10-2 118 18 86.76% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 1 2 50.00% 66.67% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.633684'
Avg. expression score for this sample: '192.089'
Avg. expression score in LCM sample: '77.5756'
Tissue used: 'pure endosperm, no chalazal'
AT5G15390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.27865 x 10-1 14 5 3 13 73.68% 81.25% 19 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.633684'
Avg. expression score for this sample: '125.336'
Avg. expression score in LCM sample: '77.5756'
Tissue used: 'full endosperm'
AT5G15390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.80129 x 10-1 7 13 3 1 35.00% 25.00% 20 4 TAIR8 Avg. embryo expression (dissected): '742.691'
Avg. embryo expression (LCM): '331.446'
AT5G15390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.80429 x 10-1 12 2 85.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.81451 x 10-1 21 4 84.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15380 DRM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.00438'
Avg. expression score in LCM sample: '2.36636'
Tissue used: 'pure endosperm, no chalazal'
AT5G15380 DRM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 2 100.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.47875'
Avg. expression score in LCM sample: '2.36636'
Tissue used: 'full endosperm'
AT5G15380 DRM1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.55483'
Avg. embryo expression (LCM): '0'
AT5G15380 DRM1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15380 DRM1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15380 DRM1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.19252 x 10-1 0 13 0 31 0.00% 100.00% 13 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '418.575'
Avg. expression score in LCM sample: '138.219'
Tissue used: 'pure endosperm, no chalazal'
AT5G15360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.96598 x 10-1 0 13 0 19 0.00% 100.00% 13 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '249.134'
Avg. expression score in LCM sample: '138.219'
Tissue used: 'full endosperm'
AT5G15360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.382 x 10-2 0 48 0 21 0.00% 100.00% 48 21 TAIR8 Avg. embryo expression (dissected): '686.004'
Avg. embryo expression (LCM): '296.081'
AT5G15360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.87773 x 10-1 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-6 45 0 100.00% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.632 x 10-3 0 5 0.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15350 ENODL17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '876.761'
Avg. expression score in LCM sample: '478.079'
Tissue used: 'pure endosperm, no chalazal'
AT5G15350 ENODL17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '482.378'
Avg. expression score in LCM sample: '478.079'
Tissue used: 'full endosperm'
AT5G15350 ENODL17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2296.57'
Avg. embryo expression (LCM): '2276.34'
AT5G15350 ENODL17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15350 ENODL17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15350 ENODL17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.163 x 10-3 97 10 28 51 90.65% 64.56% 107 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000422'
Avg. expression score for this sample: '26.0745'
Avg. expression score in LCM sample: '5.49702'
Tissue used: 'pure endosperm, no chalazal'
AT5G15340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6214 x 10-2 254 75 42 82 77.20% 66.13% 329 124 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000422'
Avg. expression score for this sample: '44.2679'
Avg. expression score in LCM sample: '5.49702'
Tissue used: 'full endosperm'
AT5G15340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.95583 x 10-1 161 108 58 21 59.85% 26.58% 269 79 TAIR8 Avg. embryo expression (dissected): '77.0723'
Avg. embryo expression (LCM): '43.6285'
AT5G15340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.5088 x 10-2 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.3845 x 10-2 28 18 60.87% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1 x 10-23 341 8 97.71% 349 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15330 SPX4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.85714 x 10-1 1 3 0 0 25.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.9456'
Avg. expression score in LCM sample: '27.0589'
Tissue used: 'pure endosperm, no chalazal'
AT5G15330 SPX4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 0 1 100.00% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '41.8125'
Avg. expression score in LCM sample: '27.0589'
Tissue used: 'full endosperm'
AT5G15330 SPX4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 3 0 2 40.00% 100.00% 5 2 TAIR8 Avg. embryo expression (dissected): '34.4141'
Avg. embryo expression (LCM): '36.1938'
AT5G15330 SPX4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.44444 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15330 SPX4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15330 SPX4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1927 x 10-1 3 5 37.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.36507 x 10-1 6 4 6 6 60.00% 50.00% 10 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.053487'
Avg. expression score for this sample: '298.178'
Avg. expression score in LCM sample: '352.868'
Tissue used: 'pure endosperm, no chalazal'
AT5G15320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7476 x 10-2 76 20 51 142 79.17% 73.58% 96 193 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.053487'
Avg. expression score for this sample: '643.376'
Avg. expression score in LCM sample: '352.868'
Tissue used: 'full endosperm'
AT5G15320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.08285 x 10-1 15 9 6 4 62.50% 40.00% 24 10 TAIR8 Avg. embryo expression (dissected): '592.719'
Avg. embryo expression (LCM): '941.893'
AT5G15320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.4022 x 10-2 448 215 67.57% 663 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-8 580 75 88.55% 655 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15310 MYB16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.976723'
Avg. expression score in LCM sample: '3.33643'
Tissue used: 'pure endosperm, no chalazal'
AT5G15310 MYB16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.53909'
Avg. expression score in LCM sample: '3.33643'
Tissue used: 'full endosperm'
AT5G15310 MYB16 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.80184'
Avg. embryo expression (LCM): '5.70159'
AT5G15310 MYB16 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15310 MYB16 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G15310 MYB16 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'