GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G040387	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.729839 x 10^-1	409	224	176	209	64.61%	54.29%	633	385	RefGen V2	χ2 p-value for B73 x Mo17: '.2729839' χ2 p-value for Mo17 x B73: '2.56e-07' Biased in favor of strain: ''
GRMZM2G040387	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1045 x 10^-1	366	267	334	294	57.82%	46.82%	633	628	RefGen V2	χ2 p-value for B73 x Mo17: '.0000832' χ2 p-value for Mo17 x B73: '.11045' Biased in favor of strain: ''
GRMZM2G040369	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	22	0		0.00%	0	22	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: ''
GRMZM2G040369	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		16	0	5	0	100.00%	0.00%	16	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0046779' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: ''
GRMZM2G040349	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1598	391	914	353	80.34%	27.86%	1989	1267	RefGen V2	χ2 p-value for B73 x Mo17: '2.76e-38' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G040349	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1852	768	1529	662	70.69%	30.21%	2620	2191	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G040326	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.98 x 10^-7	324	160	266	162	66.94%	37.85%	484	428	RefGen V2	χ2 p-value for B73 x Mo17: '9.02e-14' χ2 p-value for Mo17 x B73: '4.98e-07' Biased in favor of strain: 'B73'
GRMZM2G040326	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.26 x 10^-13	586	153	346	263	79.30%	43.19%	739	609	RefGen V2	χ2 p-value for B73 x Mo17: '3.26e-13' χ2 p-value for Mo17 x B73: '9.96e-35' Biased in favor of strain: 'B73'
GRMZM2G040320	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.04 x 10^-11	1089	369	767	428	74.69%	35.82%	1458	1195	RefGen V2	χ2 p-value for B73 x Mo17: '8.04e-11' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G040320	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.66 x 10^-13	1170	753	1008	703	60.84%	41.09%	1923	1711	RefGen V2	χ2 p-value for B73 x Mo17: '1.92e-21' χ2 p-value for Mo17 x B73: '1.66e-13' Biased in favor of strain: 'B73'
GRMZM2G040298	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	3	0	100.00%	0.00%	5	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G040298	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	5	0	100.00%	0.00%	2	5	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: ''
GRMZM2G040278	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G040278	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.49 x 10^-8	50	8	48	2	86.21%	4.00%	58	50	RefGen V2	χ2 p-value for B73 x Mo17: '3.49e-08' χ2 p-value for Mo17 x B73: '7.75e-11' Biased in favor of strain: 'B73'
GRMZM2G040268	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	0	0.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G040268	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	7	0	5	0.00%	100.00%	7	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM2G040230	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.811 x 10^-4	188	56	105	35	77.05%	25.00%	244	140	RefGen V2	χ2 p-value for B73 x Mo17: '.0005811' χ2 p-value for Mo17 x B73: '1.34e-25' Biased in favor of strain: 'B73'
GRMZM2G040230	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.633551 x 10^-1	123	94	98	92	56.68%	48.42%	217	190	RefGen V2	χ2 p-value for B73 x Mo17: '.0489935' χ2 p-value for Mo17 x B73: '.6633551' Biased in favor of strain: ''
GRMZM2G040182	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	149	156	107	107	48.85%	50.00%	305	214	RefGen V2	χ2 p-value for B73 x Mo17: '.6885535' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G040182	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.985006 x 10^-1	93	82	61	143	53.14%	70.10%	175	204	RefGen V2	χ2 p-value for B73 x Mo17: '.0001475' χ2 p-value for Mo17 x B73: '.2985006' Biased in favor of strain: ''
GRMZM2G040161	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.45 x 10^-6	168	37	131	77	81.95%	37.02%	205	208	RefGen V2	χ2 p-value for B73 x Mo17: '3.45e-06' χ2 p-value for Mo17 x B73: '1.19e-19' Biased in favor of strain: 'B73'
GRMZM2G040161	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.4 x 10^-5	147	84	185	72	63.64%	28.02%	231	257	RefGen V2	χ2 p-value for B73 x Mo17: '.000034' χ2 p-value for Mo17 x B73: '1.81e-12' Biased in favor of strain: 'B73'
GRMZM2G040158	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.82 x 10^-5	53	15	47	15	77.94%	24.19%	68	62	RefGen V2	χ2 p-value for B73 x Mo17: '4.06e-06' χ2 p-value for Mo17 x B73: '.0000482' Biased in favor of strain: 'B73'
GRMZM2G040158	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.913 x 10^-2	38	9	24	21	80.85%	46.67%	47	45	RefGen V2	χ2 p-value for B73 x Mo17: '.03913' χ2 p-value for Mo17 x B73: '.0044265' Biased in favor of strain: ''
GRMZM2G040145	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.9278 x 10^-3	111	30	57	72	78.72%	55.81%	141	129	RefGen V2	χ2 p-value for B73 x Mo17: '.0023898' χ2 p-value for Mo17 x B73: '.0089278' Biased in favor of strain: 'B73'
GRMZM2G040145	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.76 x 10^-6	234	116	177	103	66.86%	36.79%	350	280	RefGen V2	χ2 p-value for B73 x Mo17: '2.84e-10' χ2 p-value for Mo17 x B73: '9.76e-06' Biased in favor of strain: 'B73'
GRMZM2G040131	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.86 x 10^-9	224	117	276	144	65.69%	34.29%	341	420	RefGen V2	χ2 p-value for B73 x Mo17: '6.86e-09' χ2 p-value for Mo17 x B73: '1.19e-10' Biased in favor of strain: 'B73'
GRMZM2G040131	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.62 x 10^-6	181	41	110	117	81.53%	51.54%	222	227	RefGen V2	χ2 p-value for B73 x Mo17: '2.62e-06' χ2 p-value for Mo17 x B73: '1.34e-06' Biased in favor of strain: 'B73'
GRMZM2G040121	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1312	22	725	32	98.35%	4.23%	1334	757	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G040121	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.65 x 10^-16	379	83	224	81	82.03%	26.56%	462	305	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.65e-16' Biased in favor of strain: 'B73'
GRMZM2G040115	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.31409 x 10^-2	26	12	22	8	68.42%	26.67%	38	30	RefGen V2	χ2 p-value for B73 x Mo17: '.0231409' χ2 p-value for Mo17 x B73: '.0105871' Biased in favor of strain: 'B73'
GRMZM2G040115	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	0	3	83.33%	100.00%	6	3	RefGen V2	χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G040102	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.73 x 10^-16	1483	473	923	1297	75.82%	58.42%	1956	2220	RefGen V2	χ2 p-value for B73 x Mo17: '9.04e-18' χ2 p-value for Mo17 x B73: '1.73e-16' Biased in favor of strain: 'B73'
GRMZM2G040102	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.218711 x 10^-1	205	181	84	119	53.11%	58.62%	386	203	RefGen V2	χ2 p-value for B73 x Mo17: '.2218711' χ2 p-value for Mo17 x B73: '.0140291' Biased in favor of strain: ''
GRMZM2G040095	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.464936 x 10^-1	20	24	18	36	45.45%	66.67%	44	54	RefGen V2	χ2 p-value for B73 x Mo17: '.5464936' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G040095	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		20	0	0	1	100.00%	100.00%	20	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0015655' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G040094	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.4007 x 10^-2	76	22	62	89	77.55%	58.94%	98	151	RefGen V2	χ2 p-value for B73 x Mo17: '.0222733' χ2 p-value for Mo17 x B73: '.044007' Biased in favor of strain: ''
GRMZM2G040094	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.73466 x 10^-2	114	88	117	89	56.44%	43.20%	202	206	RefGen V2	χ2 p-value for B73 x Mo17: '.0673466' χ2 p-value for Mo17 x B73: '.0510746' Biased in favor of strain: ''
GRMZM2G040090	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.81 x 10^-7	147	55	131	62	72.77%	32.12%	202	193	RefGen V2	χ2 p-value for B73 x Mo17: '9.60e-11' χ2 p-value for Mo17 x B73: '6.81e-07' Biased in favor of strain: 'B73'
GRMZM2G040090	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.59857 x 10^-2	79	27	36	18	74.53%	33.33%	106	54	RefGen V2	χ2 p-value for B73 x Mo17: '.0859857' χ2 p-value for Mo17 x B73: '2.03e-07' Biased in favor of strain: ''
GRMZM2G040078	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.891512 x 10^-1	16	13	15	9	55.17%	37.50%	29	24	RefGen V2	χ2 p-value for B73 x Mo17: '.1891512' χ2 p-value for Mo17 x B73: '.0024367' Biased in favor of strain: ''
GRMZM2G040078	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	56	48	39	39	53.85%	50.00%	104	78	RefGen V2	χ2 p-value for B73 x Mo17: '.4327676' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G040069	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.22 x 10^-7	134	63	128	39	68.02%	23.35%	197	167	RefGen V2	χ2 p-value for B73 x Mo17: '4.22e-07' χ2 p-value for Mo17 x B73: '5.70e-12' Biased in favor of strain: 'B73'
GRMZM2G040069	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.82621 x 10^-2	71	23	49	0	75.53%	0.00%	94	49	RefGen V2	χ2 p-value for B73 x Mo17: '.0682621' χ2 p-value for Mo17 x B73: '4.18e-23' Biased in favor of strain: ''
GRMZM2G040052	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G040052	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.688 x 10^-4	77	35	61	28	68.75%	31.46%	112	89	RefGen V2	χ2 p-value for B73 x Mo17: '.0000723' χ2 p-value for Mo17 x B73: '.0004688' Biased in favor of strain: 'B73'
GRMZM2G040030	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	782	338	834	349	69.82%	29.50%	1120	1183	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G040030	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.48 x 10^-10	336	79	174	180	80.96%	50.85%	415	354	RefGen V2	χ2 p-value for B73 x Mo17: '6.48e-10' χ2 p-value for Mo17 x B73: '2.72e-10' Biased in favor of strain: 'B73'
GRMZM2G040017	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.32105 x 10^-2	457	276	292	494	62.35%	62.85%	733	786	RefGen V2	χ2 p-value for B73 x Mo17: '.0130902' χ2 p-value for Mo17 x B73: '.0232105' Biased in favor of strain: ''
GRMZM2G040017	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.036259 x 10^-1	288	168	199	179	63.16%	47.35%	456	378	RefGen V2	χ2 p-value for B73 x Mo17: '1.91e-08' χ2 p-value for Mo17 x B73: '.3036259' Biased in favor of strain: ''
GRMZM2G039996	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		16	1	7	0	94.12%	0.00%	17	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0002747' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: ''
GRMZM2G039996	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.94 x 10^-13	134	7	55	5	95.04%	8.33%	141	60	RefGen V2	χ2 p-value for B73 x Mo17: '8.94e-13' χ2 p-value for Mo17 x B73: '9.23e-22' Biased in favor of strain: 'B73'
GRMZM2G039983	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	2	0	100.00%	0.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G039983	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.997413 x 10^-1	31	32	57	36	49.21%	38.71%	63	93	RefGen V2	χ2 p-value for B73 x Mo17: '.8997413' χ2 p-value for Mo17 x B73: '.0294359' Biased in favor of strain: ''
GRMZM2G039982	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.772089 x 10^-1	118	90	90	76	56.73%	45.78%	208	166	RefGen V2	χ2 p-value for B73 x Mo17: '.0522036' χ2 p-value for Mo17 x B73: '.2772089' Biased in favor of strain: ''
GRMZM2G039982	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.169905 x 10^-1	31	15	13	15	67.39%	53.57%	46	28	RefGen V2	χ2 p-value for B73 x Mo17: '.9169905' χ2 p-value for Mo17 x B73: '.1415788' Biased in favor of strain: ''
GRMZM2G039978	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.74 x 10^-6	40	0	18	0	100.00%	0.00%	40	18	RefGen V2	χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '1.97e-09' Biased in favor of strain: 'B73'
GRMZM2G039978	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.62 x 10^-6	35	0	23	0	100.00%	0.00%	35	23	RefGen V2	χ2 p-value for B73 x Mo17: '3.30e-09' χ2 p-value for Mo17 x B73: '1.62e-06' Biased in favor of strain: 'B73'
GRMZM2G039961	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.710934 x 10^-1	12	8	7	14	60.00%	66.67%	20	21	RefGen V2	χ2 p-value for B73 x Mo17: '.3710934' χ2 p-value for Mo17 x B73: '.1266305' Biased in favor of strain: ''
GRMZM2G039961	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G039954	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1280	163	933	133	88.70%	12.48%	1443	1066	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G039954	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1494	418	1895	425	78.14%	18.32%	1912	2320	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G039934	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.41 x 10^-22	181	495	204	455	26.78%	69.04%	676	659	RefGen V2	χ2 p-value for B73 x Mo17: '1.40e-33' χ2 p-value for Mo17 x B73: '1.41e-22' Biased in favor of strain: 'Mo17'
GRMZM2G039934	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G039930	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.236372 x 10^-1	65	35	28	62	65.00%	68.89%	100	90	RefGen V2	χ2 p-value for B73 x Mo17: '.7236372' χ2 p-value for Mo17 x B73: '.6547212' Biased in favor of strain: ''
GRMZM2G039930	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.17 x 10^-6	170	94	151	82	64.39%	35.19%	264	233	RefGen V2	χ2 p-value for B73 x Mo17: '2.90e-06' χ2 p-value for Mo17 x B73: '6.17e-06' Biased in favor of strain: 'B73'
GRMZM2G039922	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	834	307	863	323	73.09%	27.23%	1141	1186	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G039922	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.157853 x 10^-1	429	208	351	500	67.35%	58.75%	637	851	RefGen V2	χ2 p-value for B73 x Mo17: '.7157853' χ2 p-value for Mo17 x B73: '9.76e-07' Biased in favor of strain: ''
GRMZM2G039919	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.355451 x 10^-1	25	18	6	35	58.14%	85.37%	43	41	RefGen V2	χ2 p-value for B73 x Mo17: '.2355451' χ2 p-value for Mo17 x B73: '.0110876' Biased in favor of strain: ''
GRMZM2G039919	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.53254 x 10^-2	286	384	326	382	42.69%	53.95%	670	708	RefGen V2	χ2 p-value for B73 x Mo17: '.000153' χ2 p-value for Mo17 x B73: '.0353254' Biased in favor of strain: 'Mo17'
GRMZM2G039906	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.75123 x 10^-2	150	59	89	60	71.77%	40.27%	209	149	RefGen V2	χ2 p-value for B73 x Mo17: '3.08e-10' χ2 p-value for Mo17 x B73: '.0175123' Biased in favor of strain: 'B73'
GRMZM2G039906	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.18 x 10^-7	302	78	207	239	79.47%	53.59%	380	446	RefGen V2	χ2 p-value for B73 x Mo17: '1.18e-07' χ2 p-value for Mo17 x B73: '4.64e-09' Biased in favor of strain: 'B73'
GRMZM2G039900	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.763 x 10^-4	108	25	73	46	81.20%	38.66%	133	119	RefGen V2	χ2 p-value for B73 x Mo17: '.0003763' χ2 p-value for Mo17 x B73: '9.05e-11' Biased in favor of strain: 'B73'
GRMZM2G039900	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.95 x 10^-5	80	32	81	35	71.43%	30.17%	112	116	RefGen V2	χ2 p-value for B73 x Mo17: '5.74e-06' χ2 p-value for Mo17 x B73: '.0000195' Biased in favor of strain: 'B73'
GRMZM2G039886	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.92 x 10^-20	939	556	582	309	62.81%	34.68%	1495	891	RefGen V2	χ2 p-value for B73 x Mo17: '3.94e-23' χ2 p-value for Mo17 x B73: '5.92e-20' Biased in favor of strain: 'B73'
GRMZM2G039886	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.2059 x 10^-2	823	346	325	744	70.40%	69.60%	1169	1069	RefGen V2	χ2 p-value for B73 x Mo17: '.0067467' χ2 p-value for Mo17 x B73: '.042059' Biased in favor of strain: ''
GRMZM2G039878	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		36	0	0	5	100.00%	100.00%	36	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM2G039878	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	0	0	100.00%		6	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G039867	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.795001 x 10^-1	18	14	43	17	56.25%	28.33%	32	60	RefGen V2	χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.0007891' Biased in favor of strain: ''
GRMZM2G039867	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G039864	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.294 x 10^-4	39	4	21	5	90.70%	19.23%	43	26	RefGen V2	χ2 p-value for B73 x Mo17: '.0008294' χ2 p-value for Mo17 x B73: '2.88e-07' Biased in favor of strain: 'B73'
GRMZM2G039864	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.51 x 10^-19	160	19	121	17	89.39%	12.32%	179	138	RefGen V2	χ2 p-value for B73 x Mo17: '5.72e-26' χ2 p-value for Mo17 x B73: '8.51e-19' Biased in favor of strain: 'B73'
GRMZM2G039845	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1985	984	2027	1165	66.86%	36.50%	2969	3192	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G039845	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.447043 x 10^-1	10	8	3	11	55.56%	78.57%	18	14	RefGen V2	χ2 p-value for B73 x Mo17: '.3172992' χ2 p-value for Mo17 x B73: '.3447043' Biased in favor of strain: ''
GRMZM2G039841	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.875373 x 10^-1	11	12	8	17	47.83%	68.00%	23	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0552666' χ2 p-value for Mo17 x B73: '.8875373' Biased in favor of strain: ''
GRMZM2G039841	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.333552 x 10^-1	72	71	82	48	50.35%	36.92%	143	130	RefGen V2	χ2 p-value for B73 x Mo17: '.9333552' χ2 p-value for Mo17 x B73: '.0028637' Biased in favor of strain: ''
GRMZM2G039828	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.89 x 10^-17	493	194	400	193	71.76%	32.55%	687	593	RefGen V2	χ2 p-value for B73 x Mo17: '3.83e-30' χ2 p-value for Mo17 x B73: '1.89e-17' Biased in favor of strain: 'B73'
GRMZM2G039828	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.79 x 10^-24	1217	325	636	698	78.92%	52.32%	1542	1334	RefGen V2	χ2 p-value for B73 x Mo17: '1.79e-24' χ2 p-value for Mo17 x B73: '1.09e-28' Biased in favor of strain: 'B73'
GRMZM2G039826	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.17171 x 10^-2	93	63	86	70	59.62%	44.87%	156	156	RefGen V2	χ2 p-value for B73 x Mo17: '.0617171' χ2 p-value for Mo17 x B73: '7.71e-09' Biased in favor of strain: ''
GRMZM2G039826	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.203381 x 10^-1	126	116	110	72	52.07%	39.56%	242	182	RefGen V2	χ2 p-value for B73 x Mo17: '.5203381' χ2 p-value for Mo17 x B73: '.0048513' Biased in favor of strain: ''
GRMZM2G039824	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.005224 x 10^-1	136	76	82	87	64.15%	51.48%	212	169	RefGen V2	χ2 p-value for B73 x Mo17: '.0000378' χ2 p-value for Mo17 x B73: '.7005224' Biased in favor of strain: ''
GRMZM2G039824	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.07015 x 10^-2	297	112	199	280	72.62%	58.46%	409	479	RefGen V2	χ2 p-value for B73 x Mo17: '.0107015' χ2 p-value for Mo17 x B73: '.0001376' Biased in favor of strain: ''
GRMZM2G039811	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.698144 x 10^-1	11	2	8	4	84.62%	33.33%	13	12	RefGen V2	χ2 p-value for B73 x Mo17: '.1698144' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G039811	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.613 x 10^-4	55	17	28	6	76.39%	17.65%	72	34	RefGen V2	χ2 p-value for B73 x Mo17: '7.52e-06' χ2 p-value for Mo17 x B73: '.0001613' Biased in favor of strain: 'B73'
GRMZM2G039797	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	6	0	66.67%	0.00%	6	6	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G039797	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	3	4	7	62.50%	63.64%	8	11	RefGen V2	χ2 p-value for B73 x Mo17: '.8025764' χ2 p-value for Mo17 x B73: '.8311703' Biased in favor of strain: ''
GRMZM2G039757	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.529275 x 10^-1	857	427	561	1012	66.74%	64.34%	1284	1573	RefGen V2	χ2 p-value for B73 x Mo17: '.9529275' χ2 p-value for Mo17 x B73: '.04986' Biased in favor of strain: ''
GRMZM2G039757	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.04 x 10^-8	276	418	305	627	39.77%	67.27%	694	932	RefGen V2	χ2 p-value for B73 x Mo17: '7.04e-08' χ2 p-value for Mo17 x B73: '5.22e-26' Biased in favor of strain: 'Mo17'
GRMZM2G039746	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.9 x 10^-10	72	15	81	10	82.76%	10.99%	87	91	RefGen V2	χ2 p-value for B73 x Mo17: '9.90e-10' χ2 p-value for Mo17 x B73: '9.86e-14' Biased in favor of strain: 'B73'
GRMZM2G039746	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.6781 x 10^-3	42	7	35	16	85.71%	31.37%	49	51	RefGen V2	χ2 p-value for B73 x Mo17: '.0046781' χ2 p-value for Mo17 x B73: '8.95e-08' Biased in favor of strain: 'B73'

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