GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G043127	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.14 x 10^-20	191	5	102	25	97.45%	19.69%	196	127	RefGen V2	χ2 p-value for B73 x Mo17: '6.14e-20' χ2 p-value for Mo17 x B73: '2.86e-29' Biased in favor of strain: 'B73'
GRMZM2G043127	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.79 x 10^-7	101	40	127	29	71.63%	18.59%	141	156	RefGen V2	χ2 p-value for B73 x Mo17: '2.79e-07' χ2 p-value for Mo17 x B73: '4.29e-15' Biased in favor of strain: 'B73'
GRMZM2G043095	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.637029 x 10^-1	5	7	12	30	41.67%	71.43%	12	42	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.0054786' Biased in favor of strain: ''
GRMZM2G043095	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	1	14	23	88.89%	62.16%	9	37	RefGen V2	χ2 p-value for B73 x Mo17: '.157302' χ2 p-value for Mo17 x B73: '.5610797' Biased in favor of strain: ''
GRMZM2G043075	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173104 x 10^-1	23	17	8	10	57.50%	55.56%	40	18	RefGen V2	χ2 p-value for B73 x Mo17: '.2187452' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: ''
GRMZM2G043075	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.088094 x 10^-1	4	10	14	5	28.57%	26.32%	14	19	RefGen V2	χ2 p-value for B73 x Mo17: '.1088094' χ2 p-value for Mo17 x B73: '.0389475' Biased in favor of strain: ''
GRMZM2G043056	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1206	597	1129	516	66.89%	31.37%	1803	1645	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G043056	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.67 x 10^-28	1394	372	1055	889	78.94%	45.73%	1766	1944	RefGen V2	χ2 p-value for B73 x Mo17: '7.67e-28' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G043035	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	0	2	100.00%	100.00%	5	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G043035	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.693732 x 10^-1	710	694	649	632	50.57%	49.34%	1404	1281	RefGen V2	χ2 p-value for B73 x Mo17: '.6693732' χ2 p-value for Mo17 x B73: '.634802' Biased in favor of strain: ''
GRMZM2G042992	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.4053 x 10^-3	241	177	197	143	57.66%	42.06%	418	340	RefGen V2	χ2 p-value for B73 x Mo17: '.001746' χ2 p-value for Mo17 x B73: '.0034053' Biased in favor of strain: 'B73'
GRMZM2G042992	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.400676 x 10^-1	52	19	48	50	73.24%	51.02%	71	98	RefGen V2	χ2 p-value for B73 x Mo17: '.2400676' χ2 p-value for Mo17 x B73: '.0010172' Biased in favor of strain: ''
GRMZM2G042981	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.0412 x 10^-3	215	73	115	92	74.65%	44.44%	288	207	RefGen V2	χ2 p-value for B73 x Mo17: '.0040412' χ2 p-value for Mo17 x B73: '1.18e-11' Biased in favor of strain: 'B73'
GRMZM2G042981	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.01 x 10^-12	707	348	518	315	67.01%	37.82%	1055	833	RefGen V2	χ2 p-value for B73 x Mo17: '2.13e-28' χ2 p-value for Mo17 x B73: '2.01e-12' Biased in favor of strain: 'B73'
GRMZM2G042933	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.87817 x 10^-2	25	8	9	19	75.76%	67.86%	33	28	RefGen V2	χ2 p-value for B73 x Mo17: '.0030832' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: ''
GRMZM2G042933	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.206946 x 10^-1	136	56	33	136	70.83%	80.47%	192	169	RefGen V2	χ2 p-value for B73 x Mo17: '.2206946' χ2 p-value for Mo17 x B73: '.0001404' Biased in favor of strain: ''
GRMZM2G042920	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G042920	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.233396 x 10^-1	22	17	46	34	56.41%	42.50%	39	80	RefGen V2	χ2 p-value for B73 x Mo17: '.4233396' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G042897	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.485063 x 10^-1	8	14	11	14	36.36%	56.00%	22	25	RefGen V2	χ2 p-value for B73 x Mo17: '.2008251' χ2 p-value for Mo17 x B73: '.5485063' Biased in favor of strain: ''
GRMZM2G042897	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	6	3	6	40.00%	66.67%	10	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0736349' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G042895	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	0	0	50.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G042895	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		164	297	1	4	35.57%	80.00%	461	5	RefGen V2	χ2 p-value for B73 x Mo17: '5.85e-10' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G042893	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.33422 x 10^-2	8	20	5	32	28.57%	86.49%	28	37	RefGen V2	χ2 p-value for B73 x Mo17: '.0233422' χ2 p-value for Mo17 x B73: '9.05e-06' Biased in favor of strain: 'Mo17'
GRMZM2G042893	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.59 x 10^-8	0	36	0	59	0.00%	100.00%	36	59	RefGen V2	χ2 p-value for B73 x Mo17: '2.15e-17' χ2 p-value for Mo17 x B73: '5.59e-08' Biased in favor of strain: 'Mo17'
GRMZM2G042889	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.808399 x 10^-1	60	39	58	106	60.61%	64.63%	99	164	RefGen V2	χ2 p-value for B73 x Mo17: '.200807' χ2 p-value for Mo17 x B73: '.5808399' Biased in favor of strain: ''
GRMZM2G042889	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.529196 x 10^-1	55	36	33	38	60.44%	53.52%	91	71	RefGen V2	χ2 p-value for B73 x Mo17: '.0463995' χ2 p-value for Mo17 x B73: '.5529196' Biased in favor of strain: ''
GRMZM2G042881	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.05457 x 10^-1	21	12	15	13	63.64%	46.43%	33	28	RefGen V2	χ2 p-value for B73 x Mo17: '.1171851' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: ''
GRMZM2G042881	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	2.6995 x 10^-3	6	12	13	4	33.33%	23.53%	18	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0026995' χ2 p-value for Mo17 x B73: '.0001613' Biased in favor of strain: ''
GRMZM2G042870	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.0 x 10^-30	2	91	106	25	2.15%	19.08%	93	131	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '7.14e-31' Biased in favor of strain: ''
GRMZM2G042870	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5971 x 10^-3	151	103	168	116	59.45%	40.85%	254	284	RefGen V2	χ2 p-value for B73 x Mo17: '.0025971' χ2 p-value for Mo17 x B73: '.0020312' Biased in favor of strain: 'B73'
GRMZM2G042867	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.446615 x 10^-1	84	104	74	97	44.68%	56.73%	188	171	RefGen V2	χ2 p-value for B73 x Mo17: '.1446615' χ2 p-value for Mo17 x B73: '.0786023' Biased in favor of strain: ''
GRMZM2G042867	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	5	1	8	44.44%	88.89%	9	9	RefGen V2	χ2 p-value for B73 x Mo17: '.1572937' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G042865	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.906 x 10^-4	5	14	8	66	26.32%	89.19%	19	74	RefGen V2	χ2 p-value for B73 x Mo17: '.0001906' χ2 p-value for Mo17 x B73: '.0000396' Biased in favor of strain: 'Mo17'
GRMZM2G042865	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5414	2775	7685	3999	66.11%	34.23%	8189	11684	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G042838	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	7	4	7	7	63.64%	50.00%	11	14	RefGen V2	χ2 p-value for B73 x Mo17: '.3657123' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G042838	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.7 x 10^-5	84	12	29	18	87.50%	38.30%	96	47	RefGen V2	χ2 p-value for B73 x Mo17: '.0000149' χ2 p-value for Mo17 x B73: '.000037' Biased in favor of strain: 'B73'
GRMZM2G042818	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	1		50.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G042818	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.07011 x 10^-2	38	19	37	23	66.67%	38.33%	57	60	RefGen V2	χ2 p-value for B73 x Mo17: '.0118489' χ2 p-value for Mo17 x B73: '.0707011' Biased in favor of strain: ''
GRMZM2G042806	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.99947 x 10^-2	128	103	146	93	55.41%	38.91%	231	239	RefGen V2	χ2 p-value for B73 x Mo17: '.0999947' χ2 p-value for Mo17 x B73: '.0006074' Biased in favor of strain: ''
GRMZM2G042806	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8688 x 10^-3	177	55	116	106	76.29%	47.75%	232	222	RefGen V2	χ2 p-value for B73 x Mo17: '.0018688' χ2 p-value for Mo17 x B73: '2.24e-09' Biased in favor of strain: 'B73'
GRMZM2G042797	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.624324 x 10^-1	41	15	28	47	73.21%	62.67%	56	75	RefGen V2	χ2 p-value for B73 x Mo17: '.2986326' χ2 p-value for Mo17 x B73: '.4624324' Biased in favor of strain: ''
GRMZM2G042797	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.07593 x 10^-2	178	143	191	152	55.45%	44.31%	321	343	RefGen V2	χ2 p-value for B73 x Mo17: '.0507593' χ2 p-value for Mo17 x B73: '.0352216' Biased in favor of strain: ''
GRMZM2G042782	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.04404 x 10^-2	16	28	12	27	36.36%	69.23%	44	39	RefGen V2	χ2 p-value for B73 x Mo17: '.0704404' χ2 p-value for Mo17 x B73: '.0163092' Biased in favor of strain: ''
GRMZM2G042782	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.649149 x 10^-1	6	14	4	17	30.00%	80.95%	20	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0005042' χ2 p-value for Mo17 x B73: '.1649149' Biased in favor of strain: ''
GRMZM2G042754	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G042754	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	1	1	50.00%	50.00%	4	2	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G042752	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.787937 x 10^-1	21	22	27	18	48.84%	40.00%	43	45	RefGen V2	χ2 p-value for B73 x Mo17: '.8787937' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G042752	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.838823 x 10^-1	5	6	6	9	45.45%	60.00%	11	15	RefGen V2	χ2 p-value for B73 x Mo17: '.1355876' χ2 p-value for Mo17 x B73: '.5838823' Biased in favor of strain: ''
GRMZM2G042741	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.25929 x 10^-1	63	30	22	76	67.74%	77.55%	93	98	RefGen V2	χ2 p-value for B73 x Mo17: '.825929' χ2 p-value for Mo17 x B73: '.022271' Biased in favor of strain: ''
GRMZM2G042741	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.840882 x 10^-1	51	41	61	71	55.43%	53.79%	92	132	RefGen V2	χ2 p-value for B73 x Mo17: '.2971465' χ2 p-value for Mo17 x B73: '.3840882' Biased in favor of strain: ''
GRMZM2G042733	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	0	1	75.00%	100.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G042733	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G042712	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.346191 x 10^-1	111	34	59	92	76.55%	60.93%	145	151	RefGen V2	χ2 p-value for B73 x Mo17: '.0115699' χ2 p-value for Mo17 x B73: '.1346191' Biased in favor of strain: ''
GRMZM2G042712	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.3391 x 10^-3	48	87	44	73	35.56%	62.39%	135	117	RefGen V2	χ2 p-value for B73 x Mo17: '.0007891' χ2 p-value for Mo17 x B73: '.0073391' Biased in favor of strain: 'Mo17'
GRMZM2G042704	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	64	372	80	405	14.68%	83.51%	436	485	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G042704	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.19 x 10^-5	85	12	48	24	87.63%	33.33%	97	72	RefGen V2	χ2 p-value for B73 x Mo17: '.0000119' χ2 p-value for Mo17 x B73: '1.97e-09' Biased in favor of strain: 'B73'
GRMZM2G042683	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.474986 x 10^-1	2392	1236	1345	1462	65.93%	52.08%	3628	2807	RefGen V2	χ2 p-value for B73 x Mo17: '.3474986' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G042683	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	960	416	990	456	69.77%	31.54%	1376	1446	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G042666	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.79 x 10^-7	191	81	195	108	70.22%	35.64%	272	303	RefGen V2	χ2 p-value for B73 x Mo17: '2.56e-11' χ2 p-value for Mo17 x B73: '5.79e-07' Biased in favor of strain: 'B73'
GRMZM2G042666	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.966451 x 10^-1	177	90	126	199	66.29%	61.23%	267	325	RefGen V2	χ2 p-value for B73 x Mo17: '.8966451' χ2 p-value for Mo17 x B73: '.0376328' Biased in favor of strain: ''
GRMZM2G042664	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.24 x 10^-8	690	230	299	397	75.00%	57.04%	920	696	RefGen V2	χ2 p-value for B73 x Mo17: '8.24e-08' χ2 p-value for Mo17 x B73: '7.15e-08' Biased in favor of strain: 'B73'
GRMZM2G042664	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.75896 x 10^-1	157	63	81	83	71.36%	50.61%	220	164	RefGen V2	χ2 p-value for B73 x Mo17: '2.34e-10' χ2 p-value for Mo17 x B73: '.875896' Biased in favor of strain: ''
GRMZM2G042660	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	4	0	1	33.33%	100.00%	6	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G042660	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	1	100.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G042639	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	6	1	1	62.50%	50.00%	16	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G042639	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G042636	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1424	771	1645	853	64.87%	34.15%	2195	2498	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G042636	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.818769 x 10^-1	135	69	140	148	66.18%	51.39%	204	288	RefGen V2	χ2 p-value for B73 x Mo17: '.8818769' χ2 p-value for Mo17 x B73: '3.80e-08' Biased in favor of strain: ''
GRMZM2G042627	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.4842 x 10^-3	284	213	248	614	57.14%	71.23%	497	862	RefGen V2	χ2 p-value for B73 x Mo17: '6.67e-06' χ2 p-value for Mo17 x B73: '.0044842' Biased in favor of strain: 'Mo17'
GRMZM2G042627	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.9 x 10^-5	255	172	218	135	59.72%	38.24%	427	353	RefGen V2	χ2 p-value for B73 x Mo17: '.000059' χ2 p-value for Mo17 x B73: '9.98e-06' Biased in favor of strain: 'B73'
GRMZM2G042615	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	1	4	1	85.71%	20.00%	7	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G042615	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	1	1	66.67%	50.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G042604	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.855 x 10^-4	478	148	193	275	76.36%	58.76%	626	468	RefGen V2	χ2 p-value for B73 x Mo17: '2.70e-07' χ2 p-value for Mo17 x B73: '.0002855' Biased in favor of strain: 'B73'
GRMZM2G042604	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.15 x 10^-14	1049	692	838	553	60.25%	39.76%	1741	1391	RefGen V2	χ2 p-value for B73 x Mo17: '1.17e-17' χ2 p-value for Mo17 x B73: '2.15e-14' Biased in favor of strain: 'B73'
GRMZM2G042602	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4 x 10^-10	353	187	263	135	65.37%	33.92%	540	398	RefGen V2	χ2 p-value for B73 x Mo17: '9.10e-13' χ2 p-value for Mo17 x B73: '1.40e-10' Biased in favor of strain: 'B73'
GRMZM2G042602	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.71 x 10^-11	1009	332	464	569	75.24%	55.08%	1341	1033	RefGen V2	χ2 p-value for B73 x Mo17: '2.71e-11' χ2 p-value for Mo17 x B73: '2.83e-15' Biased in favor of strain: 'B73'
GRMZM2G042599	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.195644 x 10^-1	33	16	22	21	67.35%	48.84%	49	43	RefGen V2	χ2 p-value for B73 x Mo17: '.9195644' χ2 p-value for Mo17 x B73: '.0131326' Biased in favor of strain: ''
GRMZM2G042599	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.911022 x 10^-1	30	27	48	27	52.63%	36.00%	57	75	RefGen V2	χ2 p-value for B73 x Mo17: '.6911022' χ2 p-value for Mo17 x B73: '.0153138' Biased in favor of strain: ''
GRMZM2G042598	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.519526 x 10^-1	265	244	225	197	52.06%	46.68%	509	422	RefGen V2	χ2 p-value for B73 x Mo17: '.3519526' χ2 p-value for Mo17 x B73: '.1728766' Biased in favor of strain: ''
GRMZM2G042598	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.56557 x 10^-2	221	168	136	326	56.81%	70.56%	389	462	RefGen V2	χ2 p-value for B73 x Mo17: '.0000374' χ2 p-value for Mo17 x B73: '.0756557' Biased in favor of strain: ''
GRMZM2G042593	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.668216 x 10^-1	238	101	117	120	70.21%	50.63%	339	237	RefGen V2	χ2 p-value for B73 x Mo17: '.1668216' χ2 p-value for Mo17 x B73: '1.64e-07' Biased in favor of strain: ''
GRMZM2G042593	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.67 x 10^-6	173	96	179	77	64.31%	30.08%	269	256	RefGen V2	χ2 p-value for B73 x Mo17: '2.67e-06' χ2 p-value for Mo17 x B73: '1.83e-10' Biased in favor of strain: 'B73'
GRMZM2G042592	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.737455 x 10^-1	42	37	46	29	53.16%	38.67%	79	75	RefGen V2	χ2 p-value for B73 x Mo17: '.5737455' χ2 p-value for Mo17 x B73: '.0496472' Biased in favor of strain: ''
GRMZM2G042592	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.110028 x 10^-1	27	13	30	28	67.50%	48.28%	40	58	RefGen V2	χ2 p-value for B73 x Mo17: '.9110028' χ2 p-value for Mo17 x B73: '.0029671' Biased in favor of strain: ''
GRMZM2G042552	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.293671 x 10^-1	278	122	182	307	69.50%	62.78%	400	489	RefGen V2	χ2 p-value for B73 x Mo17: '.2293671' χ2 p-value for Mo17 x B73: '.0683549' Biased in favor of strain: ''
GRMZM2G042552	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.05 x 10^-11	768	451	708	483	63.00%	40.55%	1219	1191	RefGen V2	χ2 p-value for B73 x Mo17: '1.09e-19' χ2 p-value for Mo17 x B73: '7.05e-11' Biased in favor of strain: 'B73'
GRMZM2G042548	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	461	0	340	2	100.00%	0.58%	461	342	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G042548	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.21 x 10^-13	110	0	96	30	100.00%	23.81%	110	126	RefGen V2	χ2 p-value for B73 x Mo17: '1.21e-13' χ2 p-value for Mo17 x B73: '1.88e-24' Biased in favor of strain: 'B73'
GRMZM2G042539	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.943573 x 10^-1	10	9	9	7	52.63%	43.75%	19	16	RefGen V2	χ2 p-value for B73 x Mo17: '.1943573' χ2 p-value for Mo17 x B73: '.0518299' Biased in favor of strain: ''
GRMZM2G042539	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.616799 x 10^-1	22	8	25	22	73.33%	46.81%	30	47	RefGen V2	χ2 p-value for B73 x Mo17: '.0105871' χ2 p-value for Mo17 x B73: '.6616799' Biased in favor of strain: ''
GRMZM2G042538	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.598537 x 10^-1	25	16	29	13	60.98%	30.95%	41	42	RefGen V2	χ2 p-value for B73 x Mo17: '.1598537' χ2 p-value for Mo17 x B73: '.0135547' Biased in favor of strain: ''
GRMZM2G042538	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G042516	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G042516	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G042506	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		19	9	2	4	67.86%	66.67%	28	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: ''
GRMZM2G042506	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	6	5	3	45.45%	37.50%	11	8	RefGen V2	χ2 p-value for B73 x Mo17: '.1355876' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: ''
GRMZM2G042494	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	1	0.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G042494	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	1	100.00%	100.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G042492	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.82 x 10^-7	385	194	328	209	66.49%	38.92%	579	537	RefGen V2	χ2 p-value for B73 x Mo17: '2.06e-15' χ2 p-value for Mo17 x B73: '2.82e-07' Biased in favor of strain: 'B73'
GRMZM2G042492	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.566973 x 10^-1	480	209	186	366	69.67%	66.30%	689	552	RefGen V2	χ2 p-value for B73 x Mo17: '.0949044' χ2 p-value for Mo17 x B73: '.8566973' Biased in favor of strain: ''

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