Displaying data sets 29701 - 29800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G16230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.05623 x 10-1 6444 2589 3877 6379 71.34% 62.20% 9033 10256 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-23'
Avg. expression score for this sample: '7646'
Avg. expression score in LCM sample: '905.627'
Tissue used: 'pure endosperm, no chalazal'
AT5G16230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 8633 4785 3266 11903 64.34% 78.47% 13418 15169 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-23'
Avg. expression score for this sample: '9662.43'
Avg. expression score in LCM sample: '905.627'
Tissue used: 'full endosperm'
AT5G16230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.9 x 10-6 137 65 68 122 67.82% 64.21% 202 190 TAIR8 Avg. embryo expression (dissected): '299.2'
Avg. embryo expression (LCM): '18.122'
AT5G16230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6 x 10-11 3397 1172 74.35% 4569 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.6 x 10-23 172 3 98.29% 175 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.675 x 10-2 74 20 78.72% 94 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.037 x 10-3 457 175 146 373 72.31% 71.87% 632 519 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-06'
Avg. expression score for this sample: '242.181'
Avg. expression score in LCM sample: '148.567'
Tissue used: 'pure endosperm, no chalazal'
AT5G16220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.6 x 10-5 503 192 287 779 72.37% 73.08% 695 1066 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-06'
Avg. expression score for this sample: '257.551'
Avg. expression score in LCM sample: '148.567'
Tissue used: 'full endosperm'
AT5G16220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.6482 x 10-1 115 92 51 57 55.56% 52.78% 207 108 TAIR8 Avg. embryo expression (dissected): '113.735'
Avg. embryo expression (LCM): '29.9522'
AT5G16220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.718 x 10-2 81 19 81.00% 100 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 935 73 92.76% 1008 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1771 43 97.63% 1814 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.59394 x 10-1 114 41 83 150 73.55% 64.38% 155 233 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005611'
Avg. expression score for this sample: '232.911'
Avg. expression score in LCM sample: '77.0906'
Tissue used: 'pure endosperm, no chalazal'
AT5G16210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.077 x 10-3 382 107 134 283 78.12% 67.87% 489 417 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005611'
Avg. expression score for this sample: '242.906'
Avg. expression score in LCM sample: '77.0906'
Tissue used: 'full endosperm'
AT5G16210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.05663 x 10-1 93 65 27 26 58.86% 49.06% 158 53 TAIR8 Avg. embryo expression (dissected): '214.811'
Avg. embryo expression (LCM): '76.959'
AT5G16210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.2948 x 10-2 99 26 79.20% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.76064 x 10-1 480 212 69.36% 692 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-30 665 56 92.23% 721 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 2 100.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.753614'
Avg. expression score for this sample: '2.84343'
Avg. expression score in LCM sample: '4.61515'
Tissue used: 'pure endosperm, no chalazal'
AT5G16200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.33718 x 10-1 10 3 2 6 76.92% 75.00% 13 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.753614'
Avg. expression score for this sample: '9.41877'
Avg. expression score in LCM sample: '4.61515'
Tissue used: 'full endosperm'
AT5G16200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '2.08019'
Avg. embryo expression (LCM): '0'
AT5G16200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.52608 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.7002 x 10-2 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16190 CSLA11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G16190 CSLA11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.988737'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G16190 CSLA11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G16190 CSLA11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16190 CSLA11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16190 CSLA11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16180 CRS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.03422 x 10-1 47 8 15 15 85.45% 50.00% 55 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.667774'
Avg. expression score for this sample: '106.267'
Avg. expression score in LCM sample: '37.4944'
Tissue used: 'pure endosperm, no chalazal'
AT5G16180 CRS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.41283 x 10-1 130 41 88 90 76.02% 50.56% 171 178 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.667774'
Avg. expression score for this sample: '153.893'
Avg. expression score in LCM sample: '37.4944'
Tissue used: 'full endosperm'
AT5G16180 CRS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.27507 x 10-1 42 28 18 22 60.00% 55.00% 70 40 TAIR8 Avg. embryo expression (dissected): '248.308'
Avg. embryo expression (LCM): '124.656'
AT5G16180 CRS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.104 x 10-3 5 12 29.41% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16180 CRS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.85 x 10-4 83 16 83.84% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16180 CRS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-18 232 17 93.17% 249 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G16170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.511848'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G16170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G16170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.2779 x 10-2 20 2 3 10 90.91% 76.92% 22 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.201787'
Avg. expression score for this sample: '19.3594'
Avg. expression score in LCM sample: '10.7736'
Tissue used: 'pure endosperm, no chalazal'
AT5G16160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.92053 x 10-1 66 11 41 56 85.71% 57.73% 77 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.201787'
Avg. expression score for this sample: '61.8089'
Avg. expression score in LCM sample: '10.7736'
Tissue used: 'full endosperm'
AT5G16160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.91329 x 10-1 15 10 1 2 60.00% 66.67% 25 3 TAIR8 Avg. embryo expression (dissected): '16.2517'
Avg. embryo expression (LCM): '59.8039'
AT5G16160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.8464 x 10-2 23 2 92.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.84 x 10-4 33 1 97.06% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16150 PGLCT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.05438 x 10-1 13 6 5 14 68.42% 73.68% 19 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '327.696'
Avg. expression score in LCM sample: '131.546'
Tissue used: 'pure endosperm, no chalazal'
AT5G16150 PGLCT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 46 24 39 79 65.71% 66.95% 70 118 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '319.609'
Avg. expression score in LCM sample: '131.546'
Tissue used: 'full endosperm'
AT5G16150 PGLCT embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.59709 x 10-1 26 18 12 8 59.09% 40.00% 44 20 TAIR8 Avg. embryo expression (dissected): '604.033'
Avg. embryo expression (LCM): '292.087'
AT5G16150 PGLCT endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.7288 x 10-1 17 5 77.27% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16150 PGLCT endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.33653 x 10-1 24 5 82.76% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16150 PGLCT endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.79 x 10-4 31 2 93.94% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.36391'
Avg. expression score in LCM sample: '1.55798'
Tissue used: 'pure endosperm, no chalazal'
AT5G16140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 4 100.00% 80.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.91037'
Avg. expression score in LCM sample: '1.55798'
Tissue used: 'full endosperm'
AT5G16140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '9.35466'
Avg. embryo expression (LCM): '7.98726'
AT5G16140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.59441 x 10-1 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '93.7103'
Avg. expression score in LCM sample: '43.7851'
Tissue used: 'pure endosperm, no chalazal'
AT5G16130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '161.659'
Avg. expression score in LCM sample: '43.7851'
Tissue used: 'full endosperm'
AT5G16130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '251.313'
Avg. embryo expression (LCM): '777.564'
AT5G16130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '43.0257'
Avg. expression score in LCM sample: '12.9636'
Tissue used: 'pure endosperm, no chalazal'
AT5G16120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '62.8942'
Avg. expression score in LCM sample: '12.9636'
Tissue used: 'full endosperm'
AT5G16120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '72.5882'
Avg. embryo expression (LCM): '40.6019'
AT5G16120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0165 132 39 30 88 77.19% 74.58% 171 118 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '179.851'
Avg. expression score in LCM sample: '56.9985'
Tissue used: 'pure endosperm, no chalazal'
AT5G16110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1353 198 127 978 87.23% 88.51% 1551 1105 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '733.654'
Avg. expression score in LCM sample: '56.9985'
Tissue used: 'full endosperm'
AT5G16110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.11256 x 10-1 55 46 11 11 54.46% 50.00% 101 22 TAIR8 Avg. embryo expression (dissected): '130.315'
Avg. embryo expression (LCM): '99.0997'
AT5G16110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.93963 x 10-1 120 13 90.23% 133 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.306 x 10-2 370 77 82.77% 447 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.3 x 10-8 569 36 94.05% 605 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.243008'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G16100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.506328'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G16100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G16100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G16090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G16090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G16090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 5 0.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16080 CXE17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.593503'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G16080 CXE17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G16080 CXE17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.14265'
Avg. embryo expression (LCM): '0'
AT5G16080 CXE17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16080 CXE17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16080 CXE17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G16070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 2 7 7 84.62% 50.00% 13 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.868883'
Avg. expression score for this sample: '61.6709'
Avg. expression score in LCM sample: '54.4411'
Tissue used: 'pure endosperm, no chalazal'
AT5G16070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.40482 x 10-1 10 4 16 24 71.43% 60.00% 14 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.868883'
Avg. expression score for this sample: '71.5487'
Avg. expression score in LCM sample: '54.4411'
Tissue used: 'full endosperm'
AT5G16070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.57977 x 10-1 5 9 6 2 35.71% 25.00% 14 8 TAIR8 Avg. embryo expression (dissected): '128.994'
Avg. embryo expression (LCM): '174.916'
AT5G16070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.4984 x 10-2 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'