GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G046402	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.11395 x 10^-2	362	251	323	267	59.05%	45.25%	613	590	RefGen V2	χ2 p-value for B73 x Mo17: '7.35e-06' χ2 p-value for Mo17 x B73: '.0211395' Biased in favor of strain: 'B73'
GRMZM2G046402	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.56717 x 10^-2	503	206	363	604	70.94%	62.46%	709	967	RefGen V2	χ2 p-value for B73 x Mo17: '.0156717' χ2 p-value for Mo17 x B73: '.0055344' Biased in favor of strain: ''
GRMZM2G046382	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.87 x 10^-8	233	51	169	99	82.04%	36.94%	284	268	RefGen V2	χ2 p-value for B73 x Mo17: '3.87e-08' χ2 p-value for Mo17 x B73: '5.53e-25' Biased in favor of strain: 'B73'
GRMZM2G046382	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.31409 x 10^-2	50	3	26	12	94.34%	31.58%	53	38	RefGen V2	χ2 p-value for B73 x Mo17: '1.08e-10' χ2 p-value for Mo17 x B73: '.0231409' Biased in favor of strain: 'B73'
GRMZM2G046359	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.41 x 10^-7	29	0	26	0	100.00%	0.00%	29	26	RefGen V2	χ2 p-value for B73 x Mo17: '7.24e-08' χ2 p-value for Mo17 x B73: '3.41e-07' Biased in favor of strain: 'B73'
GRMZM2G046359	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		21	0	6	0	100.00%	0.00%	21	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0011938' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: ''
GRMZM2G046355	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.078843 x 10^-1	103	38	74	103	73.05%	58.19%	141	177	RefGen V2	χ2 p-value for B73 x Mo17: '.1078843' χ2 p-value for Mo17 x B73: '.0167695' Biased in favor of strain: ''
GRMZM2G046355	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.01812 x 10^-2	162	132	144	95	55.10%	39.75%	294	239	RefGen V2	χ2 p-value for B73 x Mo17: '.0801812' χ2 p-value for Mo17 x B73: '.0015268' Biased in favor of strain: ''
GRMZM2G046353	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	7	1	4	22.22%	80.00%	9	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0955807' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G046353	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		14	3	3	4	82.35%	57.14%	17	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1700716' χ2 p-value for Mo17 x B73: '.59298' Biased in favor of strain: ''
GRMZM2G046348	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2727	434	1641	642	86.27%	28.12%	3161	2283	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G046348	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1315	421	696	284	75.75%	28.98%	1736	980	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G046331	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	6	2	0.00%	25.00%	2	8	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G046331	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G046316	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	1	1	100.00%	50.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G046316	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.552185 x 10^-1	95	67	109	89	58.64%	44.95%	162	198	RefGen V2	χ2 p-value for B73 x Mo17: '.0278149' χ2 p-value for Mo17 x B73: '.1552185' Biased in favor of strain: ''
GRMZM2G046293	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.00471 x 10^-2	339	411	315	364	45.20%	53.61%	750	679	RefGen V2	χ2 p-value for B73 x Mo17: '.0085619' χ2 p-value for Mo17 x B73: '.0600471' Biased in favor of strain: ''
GRMZM2G046293	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.4 x 10^-9	362	93	175	148	79.56%	45.82%	455	323	RefGen V2	χ2 p-value for B73 x Mo17: '5.40e-09' χ2 p-value for Mo17 x B73: '1.90e-15' Biased in favor of strain: 'B73'
GRMZM2G046290	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.45 x 10^-25	214	0	99	0	100.00%	0.00%	214	99	RefGen V2	χ2 p-value for B73 x Mo17: '4.45e-25' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G046290	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.21 x 10^-21	117	10	161	13	92.13%	7.47%	127	174	RefGen V2	χ2 p-value for B73 x Mo17: '2.21e-21' χ2 p-value for Mo17 x B73: '3.26e-29' Biased in favor of strain: 'B73'
GRMZM2G046288	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.815113 x 10^-1	6	7	5	9	46.15%	64.29%	13	14	RefGen V2	χ2 p-value for B73 x Mo17: '.7815113' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: ''
GRMZM2G046288	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.948864 x 10^-1	6	4	5	8	60.00%	61.54%	10	13	RefGen V2	χ2 p-value for B73 x Mo17: '.654709' χ2 p-value for Mo17 x B73: '.6948864' Biased in favor of strain: ''
GRMZM2G046274	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.58 x 10^-8	366	97	247	161	79.05%	39.46%	463	408	RefGen V2	χ2 p-value for B73 x Mo17: '1.58e-08' χ2 p-value for Mo17 x B73: '2.11e-31' Biased in favor of strain: 'B73'
GRMZM2G046274	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.324162 x 10^-1	102	99	71	89	50.75%	55.62%	201	160	RefGen V2	χ2 p-value for B73 x Mo17: '.8324162' χ2 p-value for Mo17 x B73: '.1547289' Biased in favor of strain: ''
GRMZM2G046262	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	3	7	25.00%	70.00%	4	10	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: ''
GRMZM2G046262	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G046244	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.450627 x 10^-1	63	22	34	46	74.12%	57.50%	85	80	RefGen V2	χ2 p-value for B73 x Mo17: '.1450627' χ2 p-value for Mo17 x B73: '.0819902' Biased in favor of strain: ''
GRMZM2G046244	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1972 x 10^-2	69	46	43	23	60.00%	34.85%	115	66	RefGen V2	χ2 p-value for B73 x Mo17: '.031972' χ2 p-value for Mo17 x B73: '.013823' Biased in favor of strain: 'B73'
GRMZM2G046191	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	0	100.00%	0.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G046191	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	0	100.00%	0.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G046155	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.33 x 10^-5	0	13	0	32	0.00%	100.00%	13	32	RefGen V2	χ2 p-value for B73 x Mo17: '3.41e-07' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: 'Mo17'
GRMZM2G046155	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	3	0.00%	100.00%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G046101	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.348273 x 10^-1	10	9	11	12	52.63%	52.17%	19	23	RefGen V2	χ2 p-value for B73 x Mo17: '.8185458' χ2 p-value for Mo17 x B73: '.8348273' Biased in favor of strain: ''
GRMZM2G046101	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.402792 x 10^-1	7	5	9	24	58.33%	72.73%	12	33	RefGen V2	χ2 p-value for B73 x Mo17: '.5402792' χ2 p-value for Mo17 x B73: '.4601811' Biased in favor of strain: ''
GRMZM2G046088	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	2	0	50.00%	0.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G046088	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.850494 x 10^-1	5	9	10	3	35.71%	23.08%	14	13	RefGen V2	χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.0522036' Biased in favor of strain: ''
GRMZM2G046070	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	13663	74	15645	46	99.46%	0.29%	13737	15691	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G046070	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		28	0	7	0	100.00%	0.00%	28	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: ''
GRMZM2G046065	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.344489 x 10^-1	251	162	180	313	60.77%	63.49%	413	493	RefGen V2	χ2 p-value for B73 x Mo17: '.0110821' χ2 p-value for Mo17 x B73: '.1344489' Biased in favor of strain: ''
GRMZM2G046065	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0826 x 10^-3	158	105	145	92	60.08%	38.82%	263	237	RefGen V2	χ2 p-value for B73 x Mo17: '.0010826' χ2 p-value for Mo17 x B73: '.0005759' Biased in favor of strain: 'B73'
GRMZM2G046061	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.266305 x 10^-1	21	10	7	14	67.74%	66.67%	31	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0481935' χ2 p-value for Mo17 x B73: '.1266305' Biased in favor of strain: ''
GRMZM2G046061	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G046055	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2277	571	2164	2010	79.95%	48.16%	2848	4174	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G046055	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.65 x 10^-20	767	347	686	384	68.85%	35.89%	1114	1070	RefGen V2	χ2 p-value for B73 x Mo17: '2.60e-36' χ2 p-value for Mo17 x B73: '2.65e-20' Biased in favor of strain: 'B73'
GRMZM2G046037	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.209909 x 10^-1	183	148	130	111	55.29%	46.06%	331	241	RefGen V2	χ2 p-value for B73 x Mo17: '.0543829' χ2 p-value for Mo17 x B73: '.2209909' Biased in favor of strain: ''
GRMZM2G046037	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.32 x 10^-11	6	64	14	147	8.57%	91.30%	70	161	RefGen V2	χ2 p-value for B73 x Mo17: '6.29e-25' χ2 p-value for Mo17 x B73: '3.32e-11' Biased in favor of strain: 'Mo17'
GRMZM2G046025	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	2	100.00%	50.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G046025	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	2	100.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G046021	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.997413 x 10^-1	45	37	31	32	54.88%	50.79%	82	63	RefGen V2	χ2 p-value for B73 x Mo17: '.376992' χ2 p-value for Mo17 x B73: '.8997413' Biased in favor of strain: ''
GRMZM2G046021	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.178499 x 10^-1	47	16	16	31	74.60%	65.96%	63	47	RefGen V2	χ2 p-value for B73 x Mo17: '.18146' χ2 p-value for Mo17 x B73: '.9178499' Biased in favor of strain: ''
GRMZM2G046005	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7074 x 10^-3	146	22	57	65	86.90%	53.28%	168	122	RefGen V2	χ2 p-value for B73 x Mo17: '2.63e-08' χ2 p-value for Mo17 x B73: '.0017074' Biased in favor of strain: 'B73'
GRMZM2G046005	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.9876 x 10^-3	192	136	165	95	58.54%	36.54%	328	260	RefGen V2	χ2 p-value for B73 x Mo17: '.0019876' χ2 p-value for Mo17 x B73: '.0000142' Biased in favor of strain: 'B73'
GRMZM2G045987	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.573856 x 10^-1	765	661	625	576	53.65%	47.96%	1426	1201	RefGen V2	χ2 p-value for B73 x Mo17: '.0058861' χ2 p-value for Mo17 x B73: '.1573856' Biased in favor of strain: ''
GRMZM2G045987	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.297296 x 10^-1	1346	684	871	1383	66.31%	61.36%	2030	2254	RefGen V2	χ2 p-value for B73 x Mo17: '.7297296' χ2 p-value for Mo17 x B73: '8.95e-08' Biased in favor of strain: ''
GRMZM2G045981	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.33839 x 10^-2	91	31	69	62	74.59%	47.33%	122	131	RefGen V2	χ2 p-value for B73 x Mo17: '.0633839' χ2 p-value for Mo17 x B73: '2.66e-06' Biased in favor of strain: ''
GRMZM2G045981	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	550	144	477	102	79.25%	17.62%	694	579	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G045979	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.24 x 10^-19	121	0	88	2	100.00%	2.22%	121	90	RefGen V2	χ2 p-value for B73 x Mo17: '3.82e-28' χ2 p-value for Mo17 x B73: '1.24e-19' Biased in favor of strain: 'B73'
GRMZM2G045979	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.44 x 10^-15	124	0	65	5	100.00%	7.14%	124	70	RefGen V2	χ2 p-value for B73 x Mo17: '3.44e-15' χ2 p-value for Mo17 x B73: '4.36e-26' Biased in favor of strain: 'B73'
GRMZM2G045977	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.7021 x 10^-3	91	74	30	24	55.15%	44.44%	165	54	RefGen V2	χ2 p-value for B73 x Mo17: '.0017021' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: ''
GRMZM2G045977	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.45886 x 10^-2	69	45	79	50	60.53%	38.76%	114	129	RefGen V2	χ2 p-value for B73 x Mo17: '.0245886' χ2 p-value for Mo17 x B73: '.0106705' Biased in favor of strain: 'B73'
GRMZM2G045976	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.693273 x 10^-1	85	68	50	27	55.56%	35.06%	153	77	RefGen V2	χ2 p-value for B73 x Mo17: '.1693273' χ2 p-value for Mo17 x B73: '.0087648' Biased in favor of strain: ''
GRMZM2G045976	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.19692 x 10^-2	210	75	136	110	73.68%	44.72%	285	246	RefGen V2	χ2 p-value for B73 x Mo17: '.0119692' χ2 p-value for Mo17 x B73: '2.80e-13' Biased in favor of strain: ''
GRMZM2G045971	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.0274 x 10^-3	452	270	297	229	62.60%	43.54%	722	526	RefGen V2	χ2 p-value for B73 x Mo17: '1.26e-11' χ2 p-value for Mo17 x B73: '.0030274' Biased in favor of strain: 'B73'
GRMZM2G045971	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.79272 x 10^-2	518	301	360	597	63.25%	62.38%	819	957	RefGen V2	χ2 p-value for B73 x Mo17: '.0379272' χ2 p-value for Mo17 x B73: '.0049315' Biased in favor of strain: ''
GRMZM2G045970	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.027835 x 10^-1	49	14	14	21	77.78%	60.00%	63	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0613732' χ2 p-value for Mo17 x B73: '.4027835' Biased in favor of strain: ''
GRMZM2G045970	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.70502 x 10^-1	55	46	46	30	54.46%	39.47%	101	76	RefGen V2	χ2 p-value for B73 x Mo17: '.370502' χ2 p-value for Mo17 x B73: '.0664574' Biased in favor of strain: ''
GRMZM2G045955	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.59475 x 10^-2	141	106	156	79	57.09%	33.62%	247	235	RefGen V2	χ2 p-value for B73 x Mo17: '.0259475' χ2 p-value for Mo17 x B73: '5.09e-07' Biased in favor of strain: 'B73'
GRMZM2G045955	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.03 x 10^-26	339	27	276	91	92.62%	24.80%	366	367	RefGen V2	χ2 p-value for B73 x Mo17: '6.03e-26' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G045941	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G045941	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	4	0	100.00%	0.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G045921	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.81025 x 10^-2	34	15	38	20	69.39%	34.48%	49	58	RefGen V2	χ2 p-value for B73 x Mo17: '.0066419' χ2 p-value for Mo17 x B73: '.0181025' Biased in favor of strain: 'B73'
GRMZM2G045921	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.662798 x 10^-1	27	9	11	27	75.00%	71.05%	36	38	RefGen V2	χ2 p-value for B73 x Mo17: '.2888557' χ2 p-value for Mo17 x B73: '.5662798' Biased in favor of strain: ''
GRMZM2G045849	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	2		50.00%	0	4	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G045849	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	1	4	50.00%	80.00%	4	5	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G045834	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.939 x 10^-4	95	165	210	146	36.54%	41.01%	260	356	RefGen V2	χ2 p-value for B73 x Mo17: '.0000142' χ2 p-value for Mo17 x B73: '.0006939' Biased in favor of strain: ''
GRMZM2G045834	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	0.0	628	1112	2281	1290	36.09%	36.12%	1740	3571	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G045820	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.864221 x 10^-1	7	7	2	9	50.00%	81.82%	14	11	RefGen V2	χ2 p-value for B73 x Mo17: '.1858694' χ2 p-value for Mo17 x B73: '.2864221' Biased in favor of strain: ''
GRMZM2G045820	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.716076 x 10^-1	27	23	21	25	54.00%	54.35%	50	46	RefGen V2	χ2 p-value for B73 x Mo17: '.5716076' χ2 p-value for Mo17 x B73: '.5553463' Biased in favor of strain: ''
GRMZM2G045809	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.53 x 10^-6	84	3	11	45	96.55%	80.36%	87	56	RefGen V2	χ2 p-value for B73 x Mo17: '3.82e-18' χ2 p-value for Mo17 x B73: '5.53e-06' Biased in favor of strain: ''
GRMZM2G045809	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	5.95 x 10^-5	93	1	1	37	98.94%	97.37%	94	38	RefGen V2	χ2 p-value for B73 x Mo17: '3.20e-11' χ2 p-value for Mo17 x B73: '.0000595' Biased in favor of strain: ''
GRMZM2G045781	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	1		50.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G045781	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.78 x 10^-17	103	296	137	314	25.81%	69.62%	399	451	RefGen V2	χ2 p-value for B73 x Mo17: '4.37e-22' χ2 p-value for Mo17 x B73: '7.78e-17' Biased in favor of strain: 'Mo17'
GRMZM2G045779	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	0	4	50.00%	100.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G045779	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	2	100.00%	100.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G045753	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.243 x 10^-4	84	15	40	27	84.85%	40.30%	99	67	RefGen V2	χ2 p-value for B73 x Mo17: '.0001243' χ2 p-value for Mo17 x B73: '4.68e-06' Biased in favor of strain: 'B73'
GRMZM2G045753	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.25 x 10^-6	115	29	74	29	79.86%	28.16%	144	103	RefGen V2	χ2 p-value for B73 x Mo17: '7.68e-13' χ2 p-value for Mo17 x B73: '9.25e-06' Biased in favor of strain: 'B73'
GRMZM2G045748	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.37 x 10^-7	66	6	45	7	91.67%	13.46%	72	52	RefGen V2	χ2 p-value for B73 x Mo17: '1.54e-12' χ2 p-value for Mo17 x B73: '1.37e-07' Biased in favor of strain: 'B73'
GRMZM2G045748	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G045732	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	450	31	185	48	93.56%	20.60%	481	233	RefGen V2	χ2 p-value for B73 x Mo17: '6.62e-36' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G045732	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.27 x 10^-14	455	252	451	214	64.36%	32.18%	707	665	RefGen V2	χ2 p-value for B73 x Mo17: '2.27e-14' χ2 p-value for Mo17 x B73: '3.91e-20' Biased in favor of strain: 'B73'
GRMZM2G045720	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.69742 x 10^-2	107	70	81	60	60.45%	42.55%	177	141	RefGen V2	χ2 p-value for B73 x Mo17: '.0054177' χ2 p-value for Mo17 x B73: '.0769742' Biased in favor of strain: ''
GRMZM2G045720	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	0	1	33.33%	100.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G045714	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	4.8633 x 10^-3	57	49	91	74	53.77%	44.85%	106	165	RefGen V2	χ2 p-value for B73 x Mo17: '.0048633' χ2 p-value for Mo17 x B73: '2.76e-09' Biased in favor of strain: ''
GRMZM2G045714	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	48	48	34	31	50.00%	47.69%	96	65	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.7098153' Biased in favor of strain: ''
GRMZM2G045699	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.24 x 10^-8	79	1	29	0	98.75%	0.00%	80	29	RefGen V2	χ2 p-value for B73 x Mo17: '2.77e-18' χ2 p-value for Mo17 x B73: '7.24e-08' Biased in favor of strain: 'B73'
GRMZM2G045699	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	52	0	100.00%	0.00%	1	52	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '2.02e-24' Biased in favor of strain: ''
GRMZM2G045690	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.38 x 10^-8	133	18	195	73	88.08%	27.24%	151	268	RefGen V2	χ2 p-value for B73 x Mo17: '2.38e-08' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G045690	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.38 x 10^-23	574	209	471	211	73.31%	30.94%	783	682	RefGen V2	χ2 p-value for B73 x Mo17: '6.87e-39' χ2 p-value for Mo17 x B73: '2.38e-23' Biased in favor of strain: 'B73'
GRMZM2G045688	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.86827 x 10^-2	69	44	83	48	61.06%	36.64%	113	131	RefGen V2	χ2 p-value for B73 x Mo17: '.0186827' χ2 p-value for Mo17 x B73: '.0022285' Biased in favor of strain: 'B73'
GRMZM2G045688	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.242 x 10^-4	67	12	32	20	84.81%	38.46%	79	52	RefGen V2	χ2 p-value for B73 x Mo17: '.0006242' χ2 p-value for Mo17 x B73: '.000016' Biased in favor of strain: 'B73'

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