Displaying data sets 29001 - 29100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G17290 APG5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.04728 x 10-1 20 6 6 24 76.92% 80.00% 26 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.161112'
Avg. expression score for this sample: '100.229'
Avg. expression score in LCM sample: '30.5276'
Tissue used: 'full endosperm'
AT5G17290 APG5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7337 x 10-1 9 3 1 2 75.00% 66.67% 12 3 TAIR8 Avg. embryo expression (dissected): '35.8812'
Avg. embryo expression (LCM): '27.0512'
AT5G17290 APG5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3658 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17290 APG5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.37577 x 10-1 34 7 82.93% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '106.16'
Avg. expression score in LCM sample: '66.5816'
Tissue used: 'pure endosperm, no chalazal'
AT5G17280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '102.666'
Avg. expression score in LCM sample: '66.5816'
Tissue used: 'full endosperm'
AT5G17280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '107.129'
Avg. embryo expression (LCM): '101.147'
AT5G17280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.56897 x 10-1 67 34 66.34% 101 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.49447 x 10-1 8 2 4 9 80.00% 69.23% 10 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.870837'
Avg. expression score for this sample: '8.64382'
Avg. expression score in LCM sample: '6.56997'
Tissue used: 'pure endosperm, no chalazal'
AT5G17270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 13 14 7 29 48.15% 80.56% 27 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.870837'
Avg. expression score for this sample: '17.6585'
Avg. expression score in LCM sample: '6.56997'
Tissue used: 'full endosperm'
AT5G17270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.30319 x 10-1 18 15 4 9 54.55% 69.23% 33 13 TAIR8 Avg. embryo expression (dissected): '29.5662'
Avg. embryo expression (LCM): '45.3867'
AT5G17270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.06061 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.43363 x 10-1 64 38 62.75% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17262 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17262 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G17262 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G17262 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G17262 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17262 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17260 NAC086 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17260 NAC086 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G17260 NAC086 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.88877'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G17260 NAC086 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G17260 NAC086 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17260 NAC086 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.53 x 10-4 111 13 89.52% 124 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.9057 x 10-2 18 8 1 30 69.23% 96.77% 26 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.125284'
Avg. expression score for this sample: '18.6658'
Avg. expression score in LCM sample: '3.23354'
Tissue used: 'pure endosperm, no chalazal'
AT5G17250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.7615 x 10-1 23 13 22 55 63.89% 71.43% 36 77 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.125284'
Avg. expression score for this sample: '21.611'
Avg. expression score in LCM sample: '3.23354'
Tissue used: 'full endosperm'
AT5G17250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.77398 x 10-1 25 39 5 15 39.06% 75.00% 64 20 TAIR8 Avg. embryo expression (dissected): '35.3089'
Avg. embryo expression (LCM): '34.0589'
AT5G17250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.85478 x 10-1 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.457 x 10-3 129 20 86.58% 149 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17240 SDG40 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6 x 10-5 79 5 94.05% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17240 SDG40 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.59636 x 10-1 15 2 4 8 88.24% 66.67% 17 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.74453'
Avg. expression score for this sample: '8.60596'
Avg. expression score in LCM sample: '.955364'
Tissue used: 'pure endosperm, no chalazal'
AT5G17240 SDG40 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 25 4 16 13 86.21% 44.83% 29 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.74453'
Avg. expression score for this sample: '9.34505'
Avg. expression score in LCM sample: '.955364'
Tissue used: 'full endosperm'
AT5G17240 SDG40 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.91329 x 10-1 15 8 3 2 65.22% 40.00% 23 5 TAIR8 Avg. embryo expression (dissected): '11.7794'
Avg. embryo expression (LCM): '15.5978'
AT5G17240 SDG40 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17240 SDG40 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.55186 x 10-1 44 17 72.13% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17233 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17233 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G17233 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.47901'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G17233 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G17233 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17233 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17230 PSY endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-5 107 11 90.68% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17230 PSY endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 56 16 25 24 77.78% 48.98% 72 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.179145'
Avg. expression score for this sample: '115.607'
Avg. expression score in LCM sample: '99.0052'
Tissue used: 'pure endosperm, no chalazal'
AT5G17230 PSY endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.9304 x 10-2 96 18 35 63 84.21% 64.29% 114 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.179145'
Avg. expression score for this sample: '177.108'
Avg. expression score in LCM sample: '99.0052'
Tissue used: 'full endosperm'
AT5G17230 PSY embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.27273 x 10-1 74 46 35 12 61.67% 25.53% 120 47 TAIR8 Avg. embryo expression (dissected): '287.124'
Avg. embryo expression (LCM): '214.727'
AT5G17230 PSY endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.53272 x 10-1 13 10 56.52% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17230 PSY endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.19 x 10-4 63 53 54.31% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17220 GSTF12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.48434 x 10-1 184 0 100.00% 184 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17220 GSTF12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.63 x 10-4 31 0 1 10 100.00% 90.91% 31 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.1e-18'
Avg. expression score for this sample: '103.757'
Avg. expression score in LCM sample: '22.7818'
Tissue used: 'pure endosperm, no chalazal'
AT5G17220 GSTF12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.4 x 10-15 45 2 0 104 95.74% 100.00% 47 104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.1e-18'
Avg. expression score for this sample: '279.72'
Avg. expression score in LCM sample: '22.7818'
Tissue used: 'full endosperm'
AT5G17220 GSTF12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '3.00074'
Avg. embryo expression (LCM): '0'
AT5G17220 GSTF12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 38 0 100.00% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17220 GSTF12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6196 x 10-1 75 0 100.00% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '81.4438'
Avg. expression score in LCM sample: '51.6044'
Tissue used: 'pure endosperm, no chalazal'
AT5G17210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '155.803'
Avg. expression score in LCM sample: '51.6044'
Tissue used: 'full endosperm'
AT5G17210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '116.186'
Avg. embryo expression (LCM): '173.685'
AT5G17210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-5 59 7 89.39% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.27386 x 10-1 11 0 2 7 100.00% 77.78% 11 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.301315'
Avg. expression score for this sample: '4.29305'
Avg. expression score in LCM sample: '1.16114'
Tissue used: 'pure endosperm, no chalazal'
AT5G17200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8717 x 10-2 21 24 5 1 46.67% 16.67% 45 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.301315'
Avg. expression score for this sample: '7.97554'
Avg. expression score in LCM sample: '1.16114'
Tissue used: 'full endosperm'
AT5G17200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '.691241'
Avg. embryo expression (LCM): '0'
AT5G17200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.68811 x 10-1 9 5 64.29% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-14 458 67 87.24% 525 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.62059 x 10-1 204 51 139 215 80.00% 60.73% 255 354 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002847'
Avg. expression score for this sample: '637.502'
Avg. expression score in LCM sample: '201.729'
Tissue used: 'pure endosperm, no chalazal'
AT5G17190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.56 x 10-3 339 111 205 503 75.33% 71.05% 450 708 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002847'
Avg. expression score for this sample: '968.391'
Avg. expression score in LCM sample: '201.729'
Tissue used: 'full endosperm'
AT5G17190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.055 x 10-3 95 44 21 23 68.35% 52.27% 139 44 TAIR8 Avg. embryo expression (dissected): '240.668'
Avg. embryo expression (LCM): '73.8696'
AT5G17190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.8 x 10-5 82 68 54.67% 150 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.56898 x 10-1 392 156 71.53% 548 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G17180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G17180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G17180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17170 ENH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.78746 x 10-1 71 46 35 49 60.68% 58.33% 117 84 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.372201'
Avg. expression score for this sample: '70.244'
Avg. expression score in LCM sample: '14.2423'
Tissue used: 'pure endosperm, no chalazal'
AT5G17170 ENH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 123 56 59 104 68.72% 63.80% 179 163 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.372201'
Avg. expression score for this sample: '84.1958'
Avg. expression score in LCM sample: '14.2423'
Tissue used: 'full endosperm'
AT5G17170 ENH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.8457 x 10-1 127 138 33 29 47.92% 46.77% 265 62 TAIR8 Avg. embryo expression (dissected): '165.524'
Avg. embryo expression (LCM): '108.431'
AT5G17170 ENH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.0393 x 10-2 15 17 46.88% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17170 ENH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.99188 x 10-1 16 6 72.73% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17170 ENH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.12 x 10-3 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17165 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.576471'
Avg. expression score for this sample: '.572537'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G17165 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 5 50.00% 100.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.576471'
Avg. expression score for this sample: '2.63187'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G17165 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G17165 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.36 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17165 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.36 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17165 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.5 x 10-5 198 210 92 190 48.53% 67.38% 408 282 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011611'
Avg. expression score for this sample: '374.381'
Avg. expression score in LCM sample: '212.929'
Tissue used: 'pure endosperm, no chalazal'
AT5G17160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.15309 x 10-1 88 68 101 283 56.41% 73.70% 156 384 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011611'
Avg. expression score for this sample: '237.703'
Avg. expression score in LCM sample: '212.929'
Tissue used: 'full endosperm'
AT5G17160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.52609 x 10-1 329 385 30 54 46.08% 64.29% 714 84 TAIR8 Avg. embryo expression (dissected): '613.9'
Avg. embryo expression (LCM): '614.026'
AT5G17160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.62346 x 10-1 20 9 68.97% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.609 x 10-3 141 55 71.94% 196 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.412 x 10-3 53 13 80.30% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'