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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G63595 FLS4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63595 FLS4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63590 FLS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.02202 x 10-1 1 65 0 98 1.52% 100.00% 66 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000015'
Avg. expression score for this sample: '74.5219'
Avg. expression score in LCM sample: '82.0879'
Tissue used: 'pure endosperm, no chalazal'
AT5G63590 FLS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2 x 10-18 0 4 0 196 0.00% 100.00% 4 196 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000015'
Avg. expression score for this sample: '63.9473'
Avg. expression score in LCM sample: '82.0879'
Tissue used: 'full endosperm'
AT5G63590 FLS3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 3 0 3 0.00% 100.00% 3 3 TAIR8 Avg. embryo expression (dissected): '6.32051'
Avg. embryo expression (LCM): '0'
AT5G63590 FLS3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63590 FLS3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63590 FLS3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.87156 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63580 FLS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.452231'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G63580 FLS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.319097'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G63580 FLS2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 2 0 100.00% 0.00% 1 2 TAIR8 Avg. embryo expression (dissected): '5.50777'
Avg. embryo expression (LCM): '5.53833'
AT5G63580 FLS2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63580 FLS2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63580 FLS2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63570 GSA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.4058 x 10-1 35 22 12 21 61.40% 63.64% 57 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.494869'
Avg. expression score for this sample: '434.729'
Avg. expression score in LCM sample: '171.26'
Tissue used: 'pure endosperm, no chalazal'
AT5G63570 GSA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.09896 x 10-1 110 43 109 241 71.90% 68.86% 153 350 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.494869'
Avg. expression score for this sample: '361.326'
Avg. expression score in LCM sample: '171.26'
Tissue used: 'full endosperm'
AT5G63570 GSA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.8616 x 10-2 99 140 15 13 41.42% 46.43% 239 28 TAIR8 Avg. embryo expression (dissected): '1476.53'
Avg. embryo expression (LCM): '985.032'
AT5G63570 GSA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.66862 x 10-1 23 14 62.16% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63570 GSA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4 x 10-5 120 19 86.33% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63570 GSA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2 x 10-8 128 14 90.14% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63560 FACT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.59461'
Avg. expression score in LCM sample: '.98476'
Tissue used: 'pure endosperm, no chalazal'
AT5G63560 FACT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.96791'
Avg. expression score in LCM sample: '.98476'
Tissue used: 'full endosperm'
AT5G63560 FACT embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G63560 FACT endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63560 FACT endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63560 FACT endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '466.056'
Avg. expression score in LCM sample: '97.8293'
Tissue used: 'pure endosperm, no chalazal'
AT5G63550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '310.397'
Avg. expression score in LCM sample: '97.8293'
Tissue used: 'full endosperm'
AT5G63550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '938.615'
Avg. embryo expression (LCM): '827.598'
AT5G63550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.72727 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63540 RMI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35117 x 10-1 4 1 1 5 80.00% 83.33% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.4028'
Avg. expression score in LCM sample: '11.8024'
Tissue used: 'pure endosperm, no chalazal'
AT5G63540 RMI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.37428 x 10-1 3 2 6 8 60.00% 57.14% 5 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.05534'
Avg. expression score in LCM sample: '11.8024'
Tissue used: 'full endosperm'
AT5G63540 RMI1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 7 1 2 46.15% 66.67% 13 3 TAIR8 Avg. embryo expression (dissected): '26.4002'
Avg. embryo expression (LCM): '20.7217'
AT5G63540 RMI1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.91505 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63540 RMI1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.85172 x 10-1 29 21 58.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63540 RMI1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.89426 x 10-1 16 12 57.14% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63530 FP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.79964 x 10-1 407 198 299 658 67.27% 68.76% 605 957 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000035'
Avg. expression score for this sample: '2314.21'
Avg. expression score in LCM sample: '349.707'
Tissue used: 'pure endosperm, no chalazal'
AT5G63530 FP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1 x 10-7 610 178 115 337 77.41% 74.56% 788 452 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000035'
Avg. expression score for this sample: '1992.68'
Avg. expression score in LCM sample: '349.707'
Tissue used: 'full endosperm'
AT5G63530 FP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.41202 x 10-1 161 155 66 108 50.95% 62.07% 316 174 TAIR8 Avg. embryo expression (dissected): '1296.06'
Avg. embryo expression (LCM): '602.95'
AT5G63530 FP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.172 x 10-3 97 20 82.91% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63530 FP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2 x 10-14 155 7 95.68% 162 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63530 FP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-6 81 6 93.10% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 2 66.67% 66.67% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.713982'
Avg. expression score for this sample: '30.7144'
Avg. expression score in LCM sample: '20.8416'
Tissue used: 'pure endosperm, no chalazal'
AT5G63520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4472 x 10-1 6 1 1 5 85.71% 83.33% 7 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.713982'
Avg. expression score for this sample: '30.5761'
Avg. expression score in LCM sample: '20.8416'
Tissue used: 'full endosperm'
AT5G63520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '32.1396'
Avg. embryo expression (LCM): '17.0671'
AT5G63520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.98498 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8547 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63510 GAMMA CAL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '188.318'
Avg. expression score in LCM sample: '103.003'
Tissue used: 'pure endosperm, no chalazal'
AT5G63510 GAMMA CAL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '138.825'
Avg. expression score in LCM sample: '103.003'
Tissue used: 'full endosperm'
AT5G63510 GAMMA CAL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '312.877'
Avg. embryo expression (LCM): '317.531'
AT5G63510 GAMMA CAL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63510 GAMMA CAL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63510 GAMMA CAL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3805.02'
Avg. expression score in LCM sample: '2063.07'
Tissue used: 'pure endosperm, no chalazal'
AT5G63500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1092.99'
Avg. expression score in LCM sample: '2063.07'
Tissue used: 'full endosperm'
AT5G63500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1503.25'
Avg. embryo expression (LCM): '811.071'
AT5G63500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.69921 x 10-1 3 4 2 2 42.86% 50.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '69.3528'
Avg. expression score in LCM sample: '50.8548'
Tissue used: 'pure endosperm, no chalazal'
AT5G63490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.31253 x 10-1 20 5 10 16 80.00% 61.54% 25 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '65.7355'
Avg. expression score in LCM sample: '50.8548'
Tissue used: 'full endosperm'
AT5G63490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 4 2 0 63.64% 0.00% 11 2 TAIR8 Avg. embryo expression (dissected): '85.3012'
Avg. embryo expression (LCM): '42.7494'
AT5G63490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.74321 x 10-1 105 51 67.31% 156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.0861 x 10-2 77 19 80.21% 96 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.6584 x 10-2 5 0 0 7 100.00% 100.00% 5 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.159112'
Avg. expression score for this sample: '16.187'
Avg. expression score in LCM sample: '9.40667'
Tissue used: 'pure endosperm, no chalazal'
AT5G63480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.55576 x 10-1 11 9 4 23 55.00% 85.19% 20 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.159112'
Avg. expression score for this sample: '20.8221'
Avg. expression score in LCM sample: '9.40667'
Tissue used: 'full endosperm'
AT5G63480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 11 1 2 47.62% 66.67% 21 3 TAIR8 Avg. embryo expression (dissected): '42.1587'
Avg. embryo expression (LCM): '16.075'
AT5G63480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.22903 x 10-1 11 2 84.62% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.9422 x 10-1 23 8 74.19% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63470 NF-YC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.04927 x 10-1 4 9 3 4 30.77% 57.14% 13 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '171.164'
Avg. expression score in LCM sample: '46.7247'
Tissue used: 'pure endosperm, no chalazal'
AT5G63470 NF-YC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.65322 x 10-1 12 1 2 8 92.31% 80.00% 13 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '171.129'
Avg. expression score in LCM sample: '46.7247'
Tissue used: 'full endosperm'
AT5G63470 NF-YC4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 10 4 7 33.33% 63.64% 15 11 TAIR8 Avg. embryo expression (dissected): '309.867'
Avg. embryo expression (LCM): '35.365'
AT5G63470 NF-YC4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63470 NF-YC4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.21532 x 10-1 19 6 76.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63470 NF-YC4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2233 x 10-2 20 1 95.24% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.28282 x 10-1 6 2 6 3 75.00% 33.33% 8 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.560513'
Avg. expression score for this sample: '32.9884'
Avg. expression score in LCM sample: '10.6266'
Tissue used: 'pure endosperm, no chalazal'
AT5G63460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.14947 x 10-1 17 8 7 8 68.00% 53.33% 25 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.560513'
Avg. expression score for this sample: '92.1562'
Avg. expression score in LCM sample: '10.6266'
Tissue used: 'full endosperm'
AT5G63460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.2689 x 10-2 5 16 6 0 23.81% 0.00% 21 6 TAIR8 Avg. embryo expression (dissected): '41.0867'
Avg. embryo expression (LCM): '74.1458'
AT5G63460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.3247 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.60947 x 10-1 7 6 53.85% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.634 x 10-3 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63450 CYP94B1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.04933 x 10-1 7 4 10 14 63.64% 58.33% 11 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.826051'
Avg. expression score for this sample: '12.6596'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G63450 CYP94B1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.23242 x 10-1 45 25 21 62 64.29% 74.70% 70 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.826051'
Avg. expression score for this sample: '43.6677'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G63450 CYP94B1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.173016'
Avg. embryo expression (LCM): '0'
AT5G63450 CYP94B1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.80913 x 10-1 9 8 52.94% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63450 CYP94B1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.05319 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63450 CYP94B1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '58.5419'
Avg. expression score in LCM sample: '27.8819'
Tissue used: 'pure endosperm, no chalazal'
AT5G63440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '95.0473'
Avg. expression score in LCM sample: '27.8819'
Tissue used: 'full endosperm'
AT5G63440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '129.706'
Avg. embryo expression (LCM): '103.232'
AT5G63440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G63420 emb2746 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 3 0 1 25.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '38.3172'
Avg. expression score in LCM sample: '14.1688'
Tissue used: 'pure endosperm, no chalazal'
AT5G63420 emb2746 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 3 1 5 50.00% 83.33% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '46.0282'
Avg. expression score in LCM sample: '14.1688'
Tissue used: 'full endosperm'