| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G049159 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.12938 x 10-2 | 1216 | 853 | 829 | 729 | 58.77% | 46.79% | 2069 | 1558 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.46e-15' χ2 p-value for Mo17 x B73: '.0112938' Biased in favor of strain: 'B73' |
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| GRMZM2G049159 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.35 x 10-24 | 1508 | 402 | 777 | 952 | 78.95% | 55.06% | 1910 | 1729 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.67e-30' χ2 p-value for Mo17 x B73: '1.35e-24' Biased in favor of strain: 'B73' |
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| GRMZM2G049155 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.713422 x 10-1 | 79 | 29 | 51 | 97 | 73.15% | 65.54% | 108 | 148 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1530547' χ2 p-value for Mo17 x B73: '.7713422' Biased in favor of strain: '' |
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| GRMZM2G049155 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.958682 x 10-1 | 111 | 70 | 73 | 65 | 61.33% | 47.10% | 181 | 138 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0023075' χ2 p-value for Mo17 x B73: '.4958682' Biased in favor of strain: '' |
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| GRMZM2G049141 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.784259 x 10-1 | 699 | 567 | 447 | 480 | 55.21% | 51.78% | 1266 | 927 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002074' χ2 p-value for Mo17 x B73: '.2784259' Biased in favor of strain: '' |
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| GRMZM2G049141 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.519261 x 10-1 | 946 | 531 | 475 | 960 | 64.05% | 66.90% | 1477 | 1435 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0328039' χ2 p-value for Mo17 x B73: '.8519261' Biased in favor of strain: '' |
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| GRMZM2G049109 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173186 x 10-1 | 14 | 4 | 22 | 5 | 77.78% | 18.52% | 18 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173186' χ2 p-value for Mo17 x B73: '1.11e-07' Biased in favor of strain: '' |
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| GRMZM2G049109 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 3 | 2 | 5 | 72.73% | 71.43% | 11 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.131668' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: '' |
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| GRMZM2G049091 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.71 x 10-6 | 424 | 246 | 310 | 205 | 63.28% | 39.81% | 670 | 515 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.12e-12' χ2 p-value for Mo17 x B73: '3.71e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G049091 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.216 x 10-4 | 368 | 130 | 218 | 298 | 73.90% | 57.75% | 498 | 516 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006216' χ2 p-value for Mo17 x B73: '.0000174' Biased in favor of strain: 'B73' |
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| GRMZM2G049088 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 2 | 0.00% | 66.67% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G049088 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 0 | 2 | 50.00% | 100.00% | 8 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G049077 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.67623 x 10-2 | 89 | 54 | 88 | 59 | 62.24% | 40.14% | 143 | 147 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0034242' χ2 p-value for Mo17 x B73: '.0167623' Biased in favor of strain: 'B73' |
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| GRMZM2G049077 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.73 x 10-7 | 50 | 0 | 54 | 12 | 100.00% | 18.18% | 50 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.73e-07' χ2 p-value for Mo17 x B73: '6.50e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G049076 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.717588 x 10-1 | 99 | 42 | 73 | 121 | 70.21% | 62.37% | 141 | 194 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3717588' χ2 p-value for Mo17 x B73: '.2043756' Biased in favor of strain: '' |
||||
| GRMZM2G049076 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.679208 x 10-1 | 118 | 72 | 50 | 43 | 62.11% | 46.24% | 190 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008463' χ2 p-value for Mo17 x B73: '.4679208' Biased in favor of strain: '' |
||||
| GRMZM2G049070 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.657123 x 10-1 | 25 | 15 | 25 | 19 | 62.50% | 43.18% | 40 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138463' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: '' |
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| GRMZM2G049070 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.553755 x 10-1 | 64 | 28 | 41 | 48 | 69.57% | 53.93% | 92 | 89 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5553755' χ2 p-value for Mo17 x B73: '.0108216' Biased in favor of strain: '' |
||||
| GRMZM2G049057 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.59 x 10-6 | 139 | 28 | 57 | 27 | 83.23% | 32.14% | 167 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.59e-06' χ2 p-value for Mo17 x B73: '1.92e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G049057 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.136637 x 10-1 | 40 | 35 | 37 | 35 | 53.33% | 48.61% | 75 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.8136637' Biased in favor of strain: '' |
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| GRMZM2G049041 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.901806 x 10-1 | 164 | 146 | 111 | 115 | 52.90% | 50.88% | 310 | 226 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3066241' χ2 p-value for Mo17 x B73: '.7901806' Biased in favor of strain: '' |
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| GRMZM2G049041 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.079 x 10-4 | 160 | 46 | 96 | 87 | 77.67% | 47.54% | 206 | 183 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008079' χ2 p-value for Mo17 x B73: '4.06e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G049031 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.12 x 10-5 | 56 | 5 | 31 | 9 | 91.80% | 22.50% | 61 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000312' χ2 p-value for Mo17 x B73: '3.11e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G049031 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173105 x 10-1 | 13 | 8 | 10 | 6 | 61.90% | 37.50% | 21 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2752335' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G049021 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.21 x 10-5 | 18 | 0 | 26 | 0 | 100.00% | 0.00% | 18 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '3.41e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G049021 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G048987 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.78088 x 10-1 | 29 | 31 | 29 | 56 | 48.33% | 65.88% | 60 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0025909' χ2 p-value for Mo17 x B73: '.878088' Biased in favor of strain: '' |
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| GRMZM2G048987 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.86403 x 10-1 | 25 | 24 | 18 | 35 | 51.02% | 66.04% | 49 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.886403' χ2 p-value for Mo17 x B73: '.0195367' Biased in favor of strain: '' |
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| GRMZM2G048910 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.39 x 10-14 | 2178 | 1325 | 2133 | 1659 | 62.18% | 43.75% | 3503 | 3792 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.39e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G048910 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.75888 x 10-2 | 150 | 45 | 82 | 122 | 76.92% | 59.80% | 195 | 204 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0023803' χ2 p-value for Mo17 x B73: '.0375888' Biased in favor of strain: '' |
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| GRMZM2G048907 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.994744 x 10-1 | 20 | 11 | 18 | 11 | 64.52% | 37.93% | 31 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7994744' χ2 p-value for Mo17 x B73: '.0010283' Biased in favor of strain: '' |
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| GRMZM2G048907 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.68432 x 10-2 | 29 | 17 | 31 | 10 | 63.04% | 24.39% | 46 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0768432' χ2 p-value for Mo17 x B73: '.0010394' Biased in favor of strain: '' |
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| GRMZM2G048904 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 7 | 0.00% | 100.00% | 3 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G048904 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G048892 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0919 x 10-2 | 28 | 26 | 21 | 93 | 51.85% | 81.58% | 54 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.020919' χ2 p-value for Mo17 x B73: '.0007313' Biased in favor of strain: '' |
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| GRMZM2G048892 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.779317 x 10-1 | 17 | 10 | 5 | 15 | 62.96% | 75.00% | 27 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1779317' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G048883 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.46211 x 10-1 | 625 | 451 | 473 | 438 | 58.09% | 48.08% | 1076 | 911 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.13e-07' χ2 p-value for Mo17 x B73: '.246211' Biased in favor of strain: '' |
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| GRMZM2G048883 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.96242 x 10-1 | 122 | 51 | 86 | 157 | 70.52% | 64.61% | 173 | 243 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2823085' χ2 p-value for Mo17 x B73: '.496242' Biased in favor of strain: '' |
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| GRMZM2G048854 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.82 x 10-5 | 796 | 246 | 319 | 474 | 76.39% | 59.77% | 1042 | 793 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.75e-11' χ2 p-value for Mo17 x B73: '.0000382' Biased in favor of strain: 'B73' |
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| GRMZM2G048854 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.32256 x 10-2 | 133 | 79 | 54 | 83 | 62.74% | 60.58% | 212 | 137 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002083' χ2 p-value for Mo17 x B73: '.0132256' Biased in favor of strain: '' |
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| GRMZM2G048850 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.54 x 10-5 | 6 | 33 | 27 | 3 | 15.38% | 10.00% | 39 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000154' χ2 p-value for Mo17 x B73: '.0000118' Biased in favor of strain: '' |
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| GRMZM2G048850 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 0.0 | 4 | 148 | 192 | 34 | 2.63% | 15.04% | 152 | 226 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G048836 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 8 | 1 | 3 | 46.67% | 75.00% | 15 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1003433' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: '' |
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| GRMZM2G048836 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.615133 x 10-1 | 24 | 2 | 16 | 9 | 92.31% | 36.00% | 26 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000016' χ2 p-value for Mo17 x B73: '.1615133' Biased in favor of strain: '' |
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| GRMZM2G048821 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.33 x 10-7 | 885 | 596 | 813 | 623 | 59.76% | 43.38% | 1481 | 1436 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.93e-14' χ2 p-value for Mo17 x B73: '5.33e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G048821 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.220569 x 10-1 | 88 | 100 | 88 | 214 | 46.81% | 70.86% | 188 | 302 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.65e-09' χ2 p-value for Mo17 x B73: '.1220569' Biased in favor of strain: '' |
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| GRMZM2G048819 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.728026 x 10-1 | 35 | 19 | 24 | 53 | 64.81% | 68.83% | 54 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7728026' χ2 p-value for Mo17 x B73: '.6870136' Biased in favor of strain: '' |
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| GRMZM2G048819 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.445193 x 10-1 | 53 | 51 | 64 | 45 | 50.96% | 41.28% | 104 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8445193' χ2 p-value for Mo17 x B73: '.0687788' Biased in favor of strain: '' |
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| GRMZM2G048804 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.367236 x 10-1 | 14 | 21 | 10 | 19 | 40.00% | 65.52% | 35 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2367236' χ2 p-value for Mo17 x B73: '.0946707' Biased in favor of strain: '' |
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| GRMZM2G048804 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.054693 x 10-1 | 10 | 4 | 10 | 9 | 71.43% | 47.37% | 14 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7054693' χ2 p-value for Mo17 x B73: '.0743529' Biased in favor of strain: '' |
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| GRMZM2G048801 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 6 | 7 | 1 | 62.50% | 12.50% | 16 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236585' χ2 p-value for Mo17 x B73: '.001154' Biased in favor of strain: '' |
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| GRMZM2G048801 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.447 x 10-4 | 22 | 3 | 20 | 2 | 88.00% | 9.09% | 25 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001447' χ2 p-value for Mo17 x B73: '.0001242' Biased in favor of strain: 'B73' |
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| GRMZM2G048800 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.87 x 10-5 | 239 | 115 | 105 | 175 | 67.51% | 62.50% | 354 | 280 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.38e-11' χ2 p-value for Mo17 x B73: '.0000287' Biased in favor of strain: '' |
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| GRMZM2G048800 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.12401 x 10-2 | 1800 | 822 | 1030 | 2312 | 68.65% | 69.18% | 2622 | 3342 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0312401' χ2 p-value for Mo17 x B73: '.0020537' Biased in favor of strain: '' |
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| GRMZM2G048740 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.486695 x 10-1 | 81 | 37 | 84 | 132 | 68.64% | 61.11% | 118 | 216 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6486695' χ2 p-value for Mo17 x B73: '.0832644' Biased in favor of strain: '' |
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| GRMZM2G048740 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.457625 x 10-1 | 129 | 112 | 132 | 142 | 53.53% | 51.82% | 241 | 274 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2734876' χ2 p-value for Mo17 x B73: '.5457625' Biased in favor of strain: '' |
||||
| GRMZM2G048733 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.09 x 10-9 | 331 | 134 | 362 | 223 | 71.18% | 38.12% | 465 | 585 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.50e-20' χ2 p-value for Mo17 x B73: '9.09e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G048733 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.56995 x 10-2 | 235 | 81 | 71 | 106 | 74.37% | 59.89% | 316 | 177 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0036877' χ2 p-value for Mo17 x B73: '.0556995' Biased in favor of strain: '' |
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| GRMZM2G048703 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4616 | 1587 | 2272 | 2734 | 74.42% | 54.61% | 6203 | 5006 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.47e-38' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G048703 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3078 | 1450 | 2395 | 1187 | 67.98% | 33.14% | 4528 | 3582 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G048680 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.63 x 10-7 | 0 | 25 | 0 | 24 | 0.00% | 100.00% | 25 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.73e-07' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G048680 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 16 | 0.00% | 100.00% | 4 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G048661 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 4 | 100.00% | 100.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G048661 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G048616 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5654 x 10-3 | 10 | 0 | 19 | 0 | 100.00% | 0.00% | 10 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.0000131' Biased in favor of strain: 'B73' |
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| GRMZM2G048616 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 6 | 0 | 100.00% | 0.00% | 6 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM2G048611 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.469411 x 10-1 | 173 | 121 | 92 | 207 | 58.84% | 69.23% | 294 | 299 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0044327' χ2 p-value for Mo17 x B73: '.3469411' Biased in favor of strain: '' |
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| GRMZM2G048611 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.907458 x 10-1 | 141 | 108 | 105 | 107 | 56.63% | 50.47% | 249 | 212 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0365021' χ2 p-value for Mo17 x B73: '.8907458' Biased in favor of strain: '' |
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| GRMZM2G048582 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.637029 x 10-1 | 34 | 17 | 26 | 22 | 66.67% | 45.83% | 51 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0172903' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G048582 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.740027 x 10-1 | 22 | 3 | 8 | 23 | 88.00% | 74.19% | 25 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0236526' χ2 p-value for Mo17 x B73: '.3740027' Biased in favor of strain: '' |
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| GRMZM2G048567 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.73 x 10-6 | 44 | 0 | 59 | 6 | 100.00% | 9.23% | 44 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.73e-06' χ2 p-value for Mo17 x B73: '8.96e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G048567 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 203 | 8 | 155 | 7 | 96.21% | 4.32% | 211 | 162 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.97e-31' Biased in favor of strain: 'B73' |
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| GRMZM2G048559 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.635525 x 10-1 | 67 | 32 | 35 | 45 | 67.68% | 56.25% | 99 | 80 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004354' χ2 p-value for Mo17 x B73: '.2635525' Biased in favor of strain: '' |
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| GRMZM2G048559 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.95057 x 10-1 | 36 | 29 | 26 | 61 | 55.38% | 70.11% | 65 | 87 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0536599' χ2 p-value for Mo17 x B73: '.495057' Biased in favor of strain: '' |
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| GRMZM2G048553 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.1 x 10-6 | 45 | 0 | 39 | 0 | 100.00% | 0.00% | 45 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.10e-06' χ2 p-value for Mo17 x B73: '1.03e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G048553 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.06 x 10-13 | 64 | 0 | 61 | 2 | 100.00% | 3.17% | 64 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.24e-15' χ2 p-value for Mo17 x B73: '1.06e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G048549 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.142162 x 10-1 | 11 | 22 | 10 | 14 | 33.33% | 58.33% | 33 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0555111' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G048549 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.144713 x 10-1 | 27 | 39 | 25 | 33 | 40.91% | 56.90% | 66 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.04e-06' χ2 p-value for Mo17 x B73: '.1144713' Biased in favor of strain: '' |
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| GRMZM2G048548 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G048548 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G048497 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.02 x 10-21 | 700 | 390 | 862 | 423 | 64.22% | 32.92% | 1090 | 1285 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.02e-21' χ2 p-value for Mo17 x B73: '1.75e-34' Biased in favor of strain: 'B73' |
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| GRMZM2G048497 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.06 x 10-6 | 341 | 100 | 180 | 142 | 77.32% | 44.10% | 441 | 322 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.06e-06' χ2 p-value for Mo17 x B73: '8.67e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G048482 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.815199 x 10-1 | 356 | 248 | 248 | 512 | 58.94% | 67.37% | 604 | 760 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000562' χ2 p-value for Mo17 x B73: '.6815199' Biased in favor of strain: '' |
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| GRMZM2G048482 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6405 x 10-3 | 309 | 195 | 306 | 236 | 61.31% | 43.54% | 504 | 542 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.82e-07' χ2 p-value for Mo17 x B73: '.0026405' Biased in favor of strain: 'B73' |
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| GRMZM2G048475 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 3 | 1 | 100.00% | 25.00% | 5 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G048475 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 17 | 1 | 1 | 4 | 94.44% | 80.00% | 18 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0124197' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: '' |
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| GRMZM2G048472 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.28402 x 10-2 | 62 | 17 | 27 | 32 | 78.48% | 54.24% | 79 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0259122' χ2 p-value for Mo17 x B73: '.0428402' Biased in favor of strain: '' |
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| GRMZM2G048472 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.8501 x 10-3 | 448 | 374 | 492 | 394 | 54.50% | 44.47% | 822 | 886 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0098501' χ2 p-value for Mo17 x B73: '.0009935' Biased in favor of strain: 'B73' |
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| GRMZM2G048470 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 6 | 3 | 50.00% | 33.33% | 8 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G048470 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 2 | 2 | 0 | 75.00% | 0.00% | 8 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170834' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G048450 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.447117 x 10-1 | 11 | 3 | 17 | 46 | 78.57% | 73.02% | 14 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3447117' χ2 p-value for Mo17 x B73: '.2850496' Biased in favor of strain: '' |
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| GRMZM2G048450 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.88869 x 10-2 | 81 | 57 | 39 | 55 | 58.70% | 58.51% | 138 | 94 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0410509' χ2 p-value for Mo17 x B73: '.0988869' Biased in favor of strain: '' |
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| GRMZM2G048435 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.22212 x 10-2 | 115 | 83 | 109 | 81 | 58.08% | 42.63% | 198 | 190 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0229575' χ2 p-value for Mo17 x B73: '.0422212' Biased in favor of strain: 'B73' |
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| GRMZM2G048435 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.655532 x 10-1 | 279 | 105 | 131 | 225 | 72.66% | 63.20% | 384 | 356 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0127837' χ2 p-value for Mo17 x B73: '.1655532' Biased in favor of strain: '' |
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| GRMZM2G048434 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.409153 x 10-1 | 253 | 143 | 138 | 320 | 63.89% | 69.87% | 396 | 458 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2409153' χ2 p-value for Mo17 x B73: '.1460018' Biased in favor of strain: '' |
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| GRMZM2G048434 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.89431 x 10-2 | 78 | 53 | 49 | 75 | 59.54% | 60.48% | 131 | 124 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0289431' χ2 p-value for Mo17 x B73: '.0195503' Biased in favor of strain: '' |
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| GRMZM2G048411 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.18105 x 10-2 | 156 | 111 | 116 | 87 | 58.43% | 42.86% | 267 | 203 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.005888' χ2 p-value for Mo17 x B73: '.0418105' Biased in favor of strain: 'B73' |
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| GRMZM2G048411 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.820883 x 10-1 | 193 | 77 | 96 | 202 | 71.48% | 67.79% | 270 | 298 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0933041' χ2 p-value for Mo17 x B73: '.6820883' Biased in favor of strain: '' |
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| GRMZM2G048403 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.49 x 10-15 | 197 | 0 | 30 | 0 | 100.00% | 0.00% | 197 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.25e-23' χ2 p-value for Mo17 x B73: '9.49e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G048403 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.466 x 10-4 | 18 | 2 | 22 | 3 | 90.00% | 12.00% | 20 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003466' χ2 p-value for Mo17 x B73: '.0001447' Biased in favor of strain: 'B73' |