GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G049902	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.85555 x 10^-2	463	194	232	346	70.47%	59.86%	657	578	RefGen V2	χ2 p-value for B73 x Mo17: '.0385555' χ2 p-value for Mo17 x B73: '.0005193' Biased in favor of strain: ''
GRMZM2G049902	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.986 x 10^-4	615	387	368	278	61.38%	43.03%	1002	646	RefGen V2	χ2 p-value for B73 x Mo17: '5.90e-13' χ2 p-value for Mo17 x B73: '.0003986' Biased in favor of strain: 'B73'
GRMZM2G049895	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1834 x 10^-2	491	426	564	485	53.54%	46.23%	917	1049	RefGen V2	χ2 p-value for B73 x Mo17: '.031834' χ2 p-value for Mo17 x B73: '.0147217' Biased in favor of strain: 'B73'
GRMZM2G049895	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.2504 x 10^-3	138	112	78	237	55.20%	75.24%	250	315	RefGen V2	χ2 p-value for B73 x Mo17: '.00012' χ2 p-value for Mo17 x B73: '.0012504' Biased in favor of strain: 'Mo17'
GRMZM2G049888	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.624129 x 10^-1	158	49	104	175	76.33%	62.72%	207	279	RefGen V2	χ2 p-value for B73 x Mo17: '.0031903' χ2 p-value for Mo17 x B73: '.1624129' Biased in favor of strain: ''
GRMZM2G049888	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.14 x 10^-7	351	148	386	260	70.34%	40.25%	499	646	RefGen V2	χ2 p-value for B73 x Mo17: '1.01e-19' χ2 p-value for Mo17 x B73: '7.14e-07' Biased in favor of strain: 'B73'
GRMZM2G049866	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.111939 x 10^-1	440	394	325	440	52.76%	57.52%	834	765	RefGen V2	χ2 p-value for B73 x Mo17: '.1111939' χ2 p-value for Mo17 x B73: '.0000321' Biased in favor of strain: ''
GRMZM2G049866	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.2504 x 10^-3	299	282	259	643	51.46%	71.29%	581	902	RefGen V2	χ2 p-value for B73 x Mo17: '7.60e-15' χ2 p-value for Mo17 x B73: '.0032504' Biased in favor of strain: 'Mo17'
GRMZM2G049839	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.87 x 10^-5	575	208	477	352	73.44%	42.46%	783	829	RefGen V2	χ2 p-value for B73 x Mo17: '.0000587' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G049839	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.16 x 10^-8	457	308	427	263	59.74%	38.12%	765	690	RefGen V2	χ2 p-value for B73 x Mo17: '7.16e-08' χ2 p-value for Mo17 x B73: '4.28e-10' Biased in favor of strain: 'B73'
GRMZM2G049811	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2638	1237	2473	1541	68.08%	38.39%	3875	4014	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G049811	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	10482	3412	6142	6214	75.44%	50.29%	13894	12356	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G049798	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	4	4	80.00%	50.00%	5	8	RefGen V2	χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: ''
GRMZM2G049798	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.31 x 10^-20	574	299	992	489	65.75%	33.02%	873	1481	RefGen V2	χ2 p-value for B73 x Mo17: '1.31e-20' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G049790	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	233	2	288	7	99.15%	2.37%	235	295	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G049790	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.9459 x 10^-3	28	2	24	1	93.33%	4.00%	30	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0019459' χ2 p-value for Mo17 x B73: '3.00e-11' Biased in favor of strain: 'B73'
GRMZM2G049781	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G049781	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	474	110	472	131	81.16%	21.72%	584	603	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G049767	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G049767	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999998 x 10^-1	8	2	8	16	80.00%	66.67%	10	24	RefGen V2	χ2 p-value for B73 x Mo17: '.3710998' χ2 p-value for Mo17 x B73: '.9999998' Biased in favor of strain: ''
GRMZM2G049762	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	2	3	100.00%	60.00%	3	5	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: ''
GRMZM2G049762	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G049759	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.529527 x 10^-1	267	178	153	129	60.00%	45.74%	445	282	RefGen V2	χ2 p-value for B73 x Mo17: '.0000245' χ2 p-value for Mo17 x B73: '.1529527' Biased in favor of strain: ''
GRMZM2G049759	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999377 x 10^-1	122	61	157	232	66.67%	59.64%	183	389	RefGen V2	χ2 p-value for B73 x Mo17: '.9999377' χ2 p-value for Mo17 x B73: '.0032838' Biased in favor of strain: ''
GRMZM2G049695	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	2	8	0	75.00%	0.00%	8	8	RefGen V2	χ2 p-value for B73 x Mo17: '.6170834' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: ''
GRMZM2G049695	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.52 x 10^-9	51	6	62	4	89.47%	6.06%	57	66	RefGen V2	χ2 p-value for B73 x Mo17: '2.52e-09' χ2 p-value for Mo17 x B73: '9.38e-13' Biased in favor of strain: 'B73'
GRMZM2G049693	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.413007 x 10^-1	144	123	129	139	53.93%	51.87%	267	268	RefGen V2	χ2 p-value for B73 x Mo17: '.1987297' χ2 p-value for Mo17 x B73: '.5413007' Biased in favor of strain: ''
GRMZM2G049693	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.650229 x 10^-1	52	14	27	47	78.79%	63.51%	66	74	RefGen V2	χ2 p-value for B73 x Mo17: '.0367167' χ2 p-value for Mo17 x B73: '.5650229' Biased in favor of strain: ''
GRMZM2G049687	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.244959 x 10^-1	257	112	183	189	69.65%	50.81%	369	372	RefGen V2	χ2 p-value for B73 x Mo17: '.2244959' χ2 p-value for Mo17 x B73: '8.63e-11' Biased in favor of strain: ''
GRMZM2G049687	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.04 x 10^-11	543	345	637	314	61.15%	33.02%	888	951	RefGen V2	χ2 p-value for B73 x Mo17: '3.04e-11' χ2 p-value for Mo17 x B73: '1.14e-25' Biased in favor of strain: 'B73'
GRMZM2G049681	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.222767 x 10^-1	274	239	320	245	53.41%	43.36%	513	565	RefGen V2	χ2 p-value for B73 x Mo17: '.1222767' χ2 p-value for Mo17 x B73: '.0016035' Biased in favor of strain: ''
GRMZM2G049681	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		26	1	6	0	96.30%	0.00%	27	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0010909' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: ''
GRMZM2G049672	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.84 x 10^-20	2071	592	983	1341	77.77%	57.70%	2663	2324	RefGen V2	χ2 p-value for B73 x Mo17: '5.47e-34' χ2 p-value for Mo17 x B73: '4.84e-20' Biased in favor of strain: 'B73'
GRMZM2G049672	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2587	1403	2339	1409	64.84%	37.59%	3990	3748	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G049661	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.657724 x 10^-1	11	10	17	18	52.38%	51.43%	21	35	RefGen V2	χ2 p-value for B73 x Mo17: '.8272594' χ2 p-value for Mo17 x B73: '.8657724' Biased in favor of strain: ''
GRMZM2G049661	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.322511 x 10^-1	69	38	35	23	64.49%	39.66%	107	58	RefGen V2	χ2 p-value for B73 x Mo17: '.6322511' χ2 p-value for Mo17 x B73: '.0000128' Biased in favor of strain: ''
GRMZM2G049654	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G049654	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	3	1	71.43%	25.00%	7	4	RefGen V2	χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G049641	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.20975 x 10^-2	1262	1072	1210	1100	54.07%	47.62%	2334	2310	RefGen V2	χ2 p-value for B73 x Mo17: '.000084' χ2 p-value for Mo17 x B73: '.0220975' Biased in favor of strain: 'B73'
GRMZM2G049641	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.1651 x 10^-3	466	330	278	691	58.54%	71.31%	796	969	RefGen V2	χ2 p-value for B73 x Mo17: '1.16e-06' χ2 p-value for Mo17 x B73: '.0021651' Biased in favor of strain: 'Mo17'
GRMZM2G049623	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.62086 x 10^-2	413	175	243	398	70.24%	62.09%	588	641	RefGen V2	χ2 p-value for B73 x Mo17: '.0662086' χ2 p-value for Mo17 x B73: '.0139808' Biased in favor of strain: ''
GRMZM2G049623	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.095234 x 10^-1	72	66	64	112	52.17%	63.64%	138	176	RefGen V2	χ2 p-value for B73 x Mo17: '.6095234' χ2 p-value for Mo17 x B73: '.0002967' Biased in favor of strain: ''
GRMZM2G049568	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.1042 x 10^-1	58	44	40	39	56.86%	49.37%	102	79	RefGen V2	χ2 p-value for B73 x Mo17: '.1656838' χ2 p-value for Mo17 x B73: '.91042' Biased in favor of strain: ''
GRMZM2G049568	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999521 x 10^-1	72	36	43	54	66.67%	55.67%	108	97	RefGen V2	χ2 p-value for B73 x Mo17: '.9999521' χ2 p-value for Mo17 x B73: '.0215922' Biased in favor of strain: ''
GRMZM2G049549	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.463 x 10^-4	73	14	38	17	83.91%	30.91%	87	55	RefGen V2	χ2 p-value for B73 x Mo17: '.0006463' χ2 p-value for Mo17 x B73: '1.85e-08' Biased in favor of strain: 'B73'
GRMZM2G049549	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	15	8	10	6	65.22%	37.50%	23	16	RefGen V2	χ2 p-value for B73 x Mo17: '.1443998' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G049547	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.03 x 10^-8	501	285	408	260	63.74%	38.92%	786	668	RefGen V2	χ2 p-value for B73 x Mo17: '1.31e-14' χ2 p-value for Mo17 x B73: '1.03e-08' Biased in favor of strain: 'B73'
GRMZM2G049547	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.02132 x 10^-1	352	178	203	327	66.42%	61.70%	530	530	RefGen V2	χ2 p-value for B73 x Mo17: '.902132' χ2 p-value for Mo17 x B73: '.0152466' Biased in favor of strain: ''
GRMZM2G049536	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.034792 x 10^-1	20	8	11	23	71.43%	67.65%	28	34	RefGen V2	χ2 p-value for B73 x Mo17: '.5929962' χ2 p-value for Mo17 x B73: '.9034792' Biased in favor of strain: ''
GRMZM2G049536	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.496918 x 10^-1	30	24	12	16	55.56%	57.14%	54	28	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.4496918' Biased in favor of strain: ''
GRMZM2G049525	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.01603 x 10^-2	297	231	219	173	56.25%	44.13%	528	392	RefGen V2	χ2 p-value for B73 x Mo17: '.0040752' χ2 p-value for Mo17 x B73: '.0201603' Biased in favor of strain: 'B73'
GRMZM2G049525	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.744061 x 10^-1	233	99	131	357	70.18%	73.16%	332	488	RefGen V2	χ2 p-value for B73 x Mo17: '.1744061' χ2 p-value for Mo17 x B73: '.0023589' Biased in favor of strain: ''
GRMZM2G049495	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.763479 x 10^-1	235	100	131	215	70.15%	62.14%	335	346	RefGen V2	χ2 p-value for B73 x Mo17: '.1763479' χ2 p-value for Mo17 x B73: '.0739904' Biased in favor of strain: ''
GRMZM2G049495	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.605 x 10^-4	401	301	393	268	57.12%	40.54%	702	661	RefGen V2	χ2 p-value for B73 x Mo17: '.0001605' χ2 p-value for Mo17 x B73: '1.16e-06' Biased in favor of strain: 'B73'
GRMZM2G049487	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.071225 x 10^-1	143	132	134	122	52.00%	47.66%	275	256	RefGen V2	χ2 p-value for B73 x Mo17: '.5071225' χ2 p-value for Mo17 x B73: '.4532547' Biased in favor of strain: ''
GRMZM2G049487	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.031 x 10^-4	94	80	43	185	54.02%	81.14%	174	228	RefGen V2	χ2 p-value for B73 x Mo17: '.0004031' χ2 p-value for Mo17 x B73: '3.55e-06' Biased in favor of strain: 'Mo17'
GRMZM2G049464	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.081797 x 10^-1	8	19	10	29	29.63%	74.36%	27	39	RefGen V2	χ2 p-value for B73 x Mo17: '.0000445' χ2 p-value for Mo17 x B73: '.3081797' Biased in favor of strain: ''
GRMZM2G049464	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.121 x 10^-4	37	9	52	23	80.43%	30.67%	46	75	RefGen V2	χ2 p-value for B73 x Mo17: '.0000365' χ2 p-value for Mo17 x B73: '.0008121' Biased in favor of strain: 'B73'
GRMZM2G049429	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.74847 x 10^-2	85	46	63	39	64.89%	38.24%	131	102	RefGen V2	χ2 p-value for B73 x Mo17: '.0006557' χ2 p-value for Mo17 x B73: '.0174847' Biased in favor of strain: 'B73'
GRMZM2G049429	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.286719 x 10^-1	116	36	63	104	76.32%	62.28%	152	167	RefGen V2	χ2 p-value for B73 x Mo17: '.0116185' χ2 p-value for Mo17 x B73: '.2286719' Biased in favor of strain: ''
GRMZM2G049422	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	2	4	100.00%	66.67%	4	6	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G049422	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	6	3	4	50.00%	57.14%	12	7	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: ''
GRMZM2G049416	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.940662 x 10^-1	309	205	258	239	60.12%	48.09%	514	497	RefGen V2	χ2 p-value for B73 x Mo17: '4.49e-06' χ2 p-value for Mo17 x B73: '.3940662' Biased in favor of strain: ''
GRMZM2G049416	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999133 x 10^-1	236	118	154	224	66.67%	59.26%	354	378	RefGen V2	χ2 p-value for B73 x Mo17: '.9999133' χ2 p-value for Mo17 x B73: '.0022502' Biased in favor of strain: ''
GRMZM2G049390	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.20676 x 10^-1	10	2	11	3	83.33%	21.43%	12	14	RefGen V2	χ2 p-value for B73 x Mo17: '.220676' χ2 p-value for Mo17 x B73: '.0003298' Biased in favor of strain: ''
GRMZM2G049390	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.547208 x 10^-1	11	9	7	11	55.00%	61.11%	20	18	RefGen V2	χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.3457786' Biased in favor of strain: ''
GRMZM2G049373	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.41 x 10^-12	1107	571	952	667	65.97%	41.20%	1678	1619	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.41e-12' Biased in favor of strain: 'B73'
GRMZM2G049373	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	maternally biased	0.0	2804	120	139	938	95.90%	87.09%	2924	1077	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G049349	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.82 x 10^-9	200	36	100	43	84.75%	30.07%	236	143	RefGen V2	χ2 p-value for B73 x Mo17: '3.82e-09' χ2 p-value for Mo17 x B73: '1.64e-20' Biased in favor of strain: 'B73'
GRMZM2G049349	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.01368 x 10^-2	28	4	12	3	87.50%	20.00%	32	15	RefGen V2	χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.0201368' Biased in favor of strain: 'B73'
GRMZM2G049347	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.15759 x 10^-2	13	25	23	39	34.21%	62.90%	38	62	RefGen V2	χ2 p-value for B73 x Mo17: '.0515759' χ2 p-value for Mo17 x B73: '.0421535' Biased in favor of strain: ''
GRMZM2G049347	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	5	3	1	54.55%	25.00%	11	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3937584' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: ''
GRMZM2G049346	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	0	0	66.67%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G049346	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	5	4	75.00%	44.44%	4	9	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: ''
GRMZM2G049342	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.446899 x 10^-1	851	583	576	565	59.34%	49.52%	1434	1141	RefGen V2	χ2 p-value for B73 x Mo17: '1.47e-12' χ2 p-value for Mo17 x B73: '.7446899' Biased in favor of strain: ''
GRMZM2G049342	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.17466 x 10^-2	1481	685	912	1117	68.37%	55.05%	2166	2029	RefGen V2	χ2 p-value for B73 x Mo17: '.0917466' χ2 p-value for Mo17 x B73: '1.28e-28' Biased in favor of strain: ''
GRMZM2G049340	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	7	13	1	12.50%	7.14%	8	14	RefGen V2	χ2 p-value for B73 x Mo17: '.001154' χ2 p-value for Mo17 x B73: '2.31e-06' Biased in favor of strain: ''
GRMZM2G049340	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.576208 x 10^-1	22	20	11	15	52.38%	57.69%	42	26	RefGen V2	χ2 p-value for B73 x Mo17: '.7576208' χ2 p-value for Mo17 x B73: '.4327676' Biased in favor of strain: ''
GRMZM2G049329	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.916011 x 10^-1	147	113	104	86	56.54%	45.26%	260	190	RefGen V2	χ2 p-value for B73 x Mo17: '.0349799' χ2 p-value for Mo17 x B73: '.1916011' Biased in favor of strain: ''
GRMZM2G049329	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.2312 x 10^-3	153	46	64	64	76.88%	50.00%	199	128	RefGen V2	χ2 p-value for B73 x Mo17: '.0022312' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: 'B73'
GRMZM2G049322	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	PEG	0.0	8	134	364	3	5.63%	0.82%	142	367	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G049322	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.149978 x 10^-1	410	563	402	431	42.14%	51.74%	973	833	RefGen V2	χ2 p-value for B73 x Mo17: '9.34e-07' χ2 p-value for Mo17 x B73: '.3149978' Biased in favor of strain: ''
GRMZM2G049318	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	4	1	100.00%	20.00%	6	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G049318	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G049269	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.14 x 10^-10	326	75	262	268	81.30%	50.57%	401	530	RefGen V2	χ2 p-value for B73 x Mo17: '5.14e-10' χ2 p-value for Mo17 x B73: '3.75e-15' Biased in favor of strain: 'B73'
GRMZM2G049269	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.5 x 10^-19	1044	536	683	393	66.08%	36.52%	1580	1076	RefGen V2	χ2 p-value for B73 x Mo17: '2.12e-37' χ2 p-value for Mo17 x B73: '9.50e-19' Biased in favor of strain: 'B73'
GRMZM2G049216	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.44 x 10^-6	27	2	35	3	93.10%	7.89%	29	38	RefGen V2	χ2 p-value for B73 x Mo17: '3.44e-06' χ2 p-value for Mo17 x B73: '2.09e-07' Biased in favor of strain: 'B73'
GRMZM2G049216	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		14	0	3	1	100.00%	25.00%	14	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0081512' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: ''
GRMZM2G049211	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	1	0	100.00%	0.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G049211	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	3	0	100.00%	0.00%	5	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G049201	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.229856 x 10^-1	47	52	53	54	47.47%	50.47%	99	107	RefGen V2	χ2 p-value for B73 x Mo17: '.6153026' χ2 p-value for Mo17 x B73: '.9229856' Biased in favor of strain: ''
GRMZM2G049201	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.453103 x 10^-1	37	10	18	41	78.72%	69.49%	47	59	RefGen V2	χ2 p-value for B73 x Mo17: '.0795352' χ2 p-value for Mo17 x B73: '.6453103' Biased in favor of strain: ''
GRMZM2G049194	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.799134 x 10^-1	116	50	75	81	69.88%	51.92%	166	156	RefGen V2	χ2 p-value for B73 x Mo17: '.3799134' χ2 p-value for Mo17 x B73: '.0000937' Biased in favor of strain: ''
GRMZM2G049194	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.025873 x 10^-1	72	40	33	31	64.29%	48.44%	112	64	RefGen V2	χ2 p-value for B73 x Mo17: '.0024969' χ2 p-value for Mo17 x B73: '.8025873' Biased in favor of strain: ''
GRMZM2G049190	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.569543 x 10^-1	140	115	140	137	54.90%	49.46%	255	277	RefGen V2	χ2 p-value for B73 x Mo17: '.1174515' χ2 p-value for Mo17 x B73: '.8569543' Biased in favor of strain: ''
GRMZM2G049190	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.403009 x 10^-1	9	3	8	7	75.00%	46.67%	12	15	RefGen V2	χ2 p-value for B73 x Mo17: '.5403009' χ2 p-value for Mo17 x B73: '.1003482' Biased in favor of strain: ''
GRMZM2G049185	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G049185	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.367236 x 10^-1	14	21	11	6	40.00%	35.29%	35	17	RefGen V2	χ2 p-value for B73 x Mo17: '.2367236' χ2 p-value for Mo17 x B73: '.2252529' Biased in favor of strain: ''
GRMZM2G049168	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.190203 x 10^-1	64	29	45	53	68.82%	54.08%	93	98	RefGen V2	χ2 p-value for B73 x Mo17: '.0002842' χ2 p-value for Mo17 x B73: '.4190203' Biased in favor of strain: ''
GRMZM2G049168	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.503685 x 10^-1	31	12	26	17	72.09%	39.53%	43	43	RefGen V2	χ2 p-value for B73 x Mo17: '.4503685' χ2 p-value for Mo17 x B73: '.0001606' Biased in favor of strain: ''

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