| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G17780 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.91329 x 10-1 | 16 | 8 | 3 | 1 | 66.67% | 25.00% | 24 | 4 | TAIR8 |
Avg. embryo expression (dissected): '18.5448' Avg. embryo expression (LCM): '21.3621' |
||||
| AT5G17780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.0814 x 10-2 | 0 | 3 | 0.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.8456 x 10-2 | 21 | 26 | 44.68% | 47 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17780 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.34454 x 10-1 | 12 | 13 | 48.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17770 | CBR | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.01748 x 10-1 | 48 | 24 | 26 | 42 | 66.67% | 61.76% | 72 | 68 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.018017' Avg. expression score for this sample: '342.117' Avg. expression score in LCM sample: '123.668' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G17770 | CBR | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.907 x 10-3 | 120 | 32 | 48 | 154 | 78.95% | 76.24% | 152 | 202 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.018017' Avg. expression score for this sample: '301.393' Avg. expression score in LCM sample: '123.668' Tissue used: 'full endosperm' |
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| AT5G17770 | CBR | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 50 | 50 | 6 | 4 | 50.00% | 40.00% | 100 | 10 | TAIR8 |
Avg. embryo expression (dissected): '494.389' Avg. embryo expression (LCM): '419.871' |
|||
| AT5G17770 | CBR | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.83716 x 10-1 | 37 | 8 | 82.22% | 45 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17770 | CBR | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.881 x 10-3 | 88 | 12 | 88.00% | 100 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17770 | CBR | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-13 | 219 | 11 | 95.22% | 230 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.85217 x 10-1 | 1127 | 634 | 604 | 1483 | 64.00% | 71.06% | 1761 | 2087 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.6e-06' Avg. expression score for this sample: '1671.6' Avg. expression score in LCM sample: '860.563' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G17760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.1 x 10-9 | 851 | 228 | 542 | 1335 | 78.87% | 71.12% | 1079 | 1877 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.6e-06' Avg. expression score for this sample: '801.493' Avg. expression score in LCM sample: '860.563' Tissue used: 'full endosperm' |
|||||
| AT5G17760 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.1239 x 10-2 | 206 | 124 | 64 | 59 | 62.42% | 47.97% | 330 | 123 | TAIR8 |
Avg. embryo expression (dissected): '307.081' Avg. embryo expression (LCM): '91.0497' |
||||
| AT5G17760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-8 | 115 | 11 | 91.27% | 126 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 915 | 85 | 91.50% | 1000 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17760 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 2963 | 82 | 97.31% | 3045 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G17750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.15385' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT5G17750 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | TAIR8 |
Avg. embryo expression (dissected): '1.26605' Avg. embryo expression (LCM): '0' |
|||||
| AT5G17750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.33333 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17750 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.33333 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.48589' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G17740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.22616' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT5G17740 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT5G17740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.128 x 10-2 | 4 | 52 | 7.14% | 56 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17740 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.671 x 10-3 | 29 | 0 | 100.00% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.369247' Avg. expression score in LCM sample: '7.29017' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G17730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.996472' Avg. expression score in LCM sample: '7.29017' Tissue used: 'full endosperm' |
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| AT5G17730 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.73335' Avg. embryo expression (LCM): '0' |
||||||
| AT5G17730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.431 x 10-3 | 420 | 9 | 97.90% | 429 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17730 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.1227 x 10-1 | 25 | 47 | 34.72% | 72 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G17720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.262091' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G17720 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT5G17720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17720 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17710 | EMB1241 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 21 | 7 | 5 | 4 | 75.00% | 44.44% | 28 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.916685' Avg. expression score for this sample: '144.2' Avg. expression score in LCM sample: '75.8559' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G17710 | EMB1241 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.08172 x 10-1 | 51 | 8 | 47 | 64 | 86.44% | 57.66% | 59 | 111 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.916685' Avg. expression score for this sample: '239.987' Avg. expression score in LCM sample: '75.8559' Tissue used: 'full endosperm' |
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| AT5G17710 | EMB1241 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 26 | 23 | 3 | 2 | 53.06% | 40.00% | 49 | 5 | TAIR8 |
Avg. embryo expression (dissected): '294.581' Avg. embryo expression (LCM): '512.478' |
|||
| AT5G17710 | EMB1241 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.54368 x 10-1 | 7 | 8 | 46.67% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17710 | EMB1241 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.63384 x 10-1 | 31 | 9 | 77.50% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17710 | EMB1241 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0036 | 71 | 13 | 84.52% | 84 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '404.353' Avg. expression score in LCM sample: '136.72' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G17700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '396.16' Avg. expression score in LCM sample: '136.72' Tissue used: 'full endosperm' |
|||||||
| AT5G17700 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '972.915' Avg. embryo expression (LCM): '265.237' |
||||||
| AT5G17700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17700 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17690 | TFL2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.24958 x 10-1 | 54 | 16 | 38 | 39 | 77.14% | 50.65% | 70 | 77 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.288754' Avg. expression score for this sample: '801.829' Avg. expression score in LCM sample: '242.795' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G17690 | TFL2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.215 x 10-3 | 75 | 8 | 10 | 11 | 90.36% | 52.38% | 83 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.288754' Avg. expression score for this sample: '389.245' Avg. expression score in LCM sample: '242.795' Tissue used: 'full endosperm' |
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| AT5G17690 | TFL2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.48047 x 10-1 | 17 | 18 | 14 | 6 | 48.57% | 30.00% | 35 | 20 | TAIR8 |
Avg. embryo expression (dissected): '663.913' Avg. embryo expression (LCM): '320.558' |
|||
| AT5G17690 | TFL2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.584 x 10-2 | 14 | 1 | 93.33% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17690 | TFL2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.7576 x 10-2 | 12 | 12 | 50.00% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17690 | TFL2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.555 x 10-3 | 68 | 11 | 86.08% | 79 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.37428 x 10-1 | 8 | 2 | 6 | 3 | 80.00% | 33.33% | 10 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.379768' Avg. expression score for this sample: '8.72251' Avg. expression score in LCM sample: '4.54166' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G17680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.15958 x 10-1 | 27 | 22 | 24 | 45 | 55.10% | 65.22% | 49 | 69 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.379768' Avg. expression score for this sample: '23.1459' Avg. expression score in LCM sample: '4.54166' Tissue used: 'full endosperm' |
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| AT5G17680 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.28308 x 10-1 | 3 | 7 | 2 | 1 | 30.00% | 33.33% | 10 | 3 | TAIR8 |
Avg. embryo expression (dissected): '10.4576' Avg. embryo expression (LCM): '6.1537' |
||||
| AT5G17680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.31871 x 10-1 | 8 | 8 | 50.00% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.5653 x 10-2 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17680 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.41 x 10-4 | 30 | 2 | 93.75% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '680.543' Avg. expression score in LCM sample: '184.738' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G17670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '461.533' Avg. expression score in LCM sample: '184.738' Tissue used: 'full endosperm' |
|||||||
| AT5G17670 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1491.53' Avg. embryo expression (LCM): '872.834' |
||||||
| AT5G17670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17670 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '79.4097' Avg. expression score in LCM sample: '26.6326' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G17660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '75.9319' Avg. expression score in LCM sample: '26.6326' Tissue used: 'full endosperm' |
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| AT5G17660 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '158.457' Avg. embryo expression (LCM): '109.649' |
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| AT5G17660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17660 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '254.919' Avg. expression score in LCM sample: '31.1743' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G17650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '83.0284' Avg. expression score in LCM sample: '31.1743' Tissue used: 'full endosperm' |
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| AT5G17650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '29.6344' Avg. embryo expression (LCM): '1.26842' |
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| AT5G17650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G17640 | ASG1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.19848 x 10-1 | 137 | 8 | 94.48% | 145 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17640 | ASG1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.007563' Avg. expression score for this sample: '3.70364' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G17640 | ASG1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.2085 x 10-2 | 28 | 2 | 3 | 14 | 93.33% | 82.35% | 30 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.007563' Avg. expression score for this sample: '14.4832' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G17640 | ASG1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.50126 x 10-1 | 28 | 17 | 9 | 1 | 62.22% | 10.00% | 45 | 10 | TAIR8 |
Avg. embryo expression (dissected): '28.0578' Avg. embryo expression (LCM): '18.0341' |
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| AT5G17640 | ASG1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.9 x 10-5 | 2 | 7 | 22.22% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17640 | ASG1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.66349 x 10-1 | 17 | 5 | 77.27% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17630 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.78774 x 10-1 | 60 | 7 | 89.55% | 67 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 2 | 6 | 66.67% | 75.00% | 3 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.163711' Avg. expression score for this sample: '43.5846' Avg. expression score in LCM sample: '46.9451' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G17630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.10619 x 10-1 | 12 | 3 | 3 | 20 | 80.00% | 86.96% | 15 | 23 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.163711' Avg. expression score for this sample: '64.6609' Avg. expression score in LCM sample: '46.9451' Tissue used: 'full endosperm' |
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| AT5G17630 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.89073 x 10-1 | 6 | 9 | 6 | 6 | 40.00% | 50.00% | 15 | 12 | TAIR8 |
Avg. embryo expression (dissected): '144.577' Avg. embryo expression (LCM): '204.429' |
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| AT5G17630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.28453 x 10-1 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.92093 x 10-1 | 24 | 10 | 70.59% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G17620 | AUG7 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.992 x 10-3 | 45 | 7 | 86.54% | 52 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17620 | AUG7 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.13123 x 10-1 | 42 | 14 | 27 | 18 | 75.00% | 40.00% | 56 | 45 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.660108' Avg. expression score for this sample: '37.1271' Avg. expression score in LCM sample: '16.2559' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G17620 | AUG7 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.66465 x 10-1 | 27 | 9 | 16 | 29 | 75.00% | 64.44% | 36 | 45 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.660108' Avg. expression score for this sample: '35.3552' Avg. expression score in LCM sample: '16.2559' Tissue used: 'full endosperm' |
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| AT5G17620 | AUG7 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.37264 x 10-1 | 31 | 30 | 7 | 13 | 50.82% | 65.00% | 61 | 20 | TAIR8 |
Avg. embryo expression (dissected): '46.4236' Avg. embryo expression (LCM): '40.6772' |
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| AT5G17620 | AUG7 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.91943 x 10-1 | 8 | 8 | 50.00% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G17620 | AUG7 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.36157 x 10-1 | 42 | 19 | 68.85% | 61 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |