Displaying data sets 28601 - 28700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G17930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.73696 x 10-1 329 125 72.47% 454 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-14 639 86 88.14% 725 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17920 ATMS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.553 x 10-3 1073 601 312 1074 64.10% 77.49% 1674 1386 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-36'
Avg. expression score for this sample: '820.171'
Avg. expression score in LCM sample: '947.722'
Tissue used: 'pure endosperm, no chalazal'
AT5G17920 ATMS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1741 710 663 3008 71.03% 81.94% 2451 3671 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-36'
Avg. expression score for this sample: '816.27'
Avg. expression score in LCM sample: '947.722'
Tissue used: 'full endosperm'
AT5G17920 ATMS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.54437 x 10-1 1534 1537 480 442 49.95% 47.94% 3071 922 TAIR8 Avg. embryo expression (dissected): '1668.21'
Avg. embryo expression (LCM): '1999.17'
AT5G17920 ATMS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.99098 x 10-1 808 242 76.95% 1050 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17920 ATMS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 x 10-13 2000 435 82.14% 2435 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17920 ATMS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3315 268 92.52% 3583 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.78612 x 10-1 970 420 622 1120 69.78% 64.29% 1390 1742 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.4e-23'
Avg. expression score for this sample: '285.13'
Avg. expression score in LCM sample: '85.9975'
Tissue used: 'pure endosperm, no chalazal'
AT5G17910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 2392 786 761 2593 75.27% 77.31% 3178 3354 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.4e-23'
Avg. expression score for this sample: '369.056'
Avg. expression score in LCM sample: '85.9975'
Tissue used: 'full endosperm'
AT5G17910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.59974 x 10-1 271 300 109 157 47.46% 59.02% 571 266 TAIR8 Avg. embryo expression (dissected): '139.705'
Avg. embryo expression (LCM): '74.3091'
AT5G17910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.59433 x 10-1 381 138 73.41% 519 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 2168 52 97.66% 2220 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2009 79 96.22% 2088 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.131 x 10-3 1002 227 425 555 81.53% 56.63% 1229 980 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.5e-11'
Avg. expression score for this sample: '844.566'
Avg. expression score in LCM sample: '175.537'
Tissue used: 'pure endosperm, no chalazal'
AT5G17900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.6 x 10-10 2201 427 1016 1548 83.75% 60.37% 2628 2564 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.5e-11'
Avg. expression score for this sample: '1301.31'
Avg. expression score in LCM sample: '175.537'
Tissue used: 'full endosperm'
AT5G17900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4443 x 10-2 515 292 213 108 63.82% 33.64% 807 321 TAIR8 Avg. embryo expression (dissected): '738.64'
Avg. embryo expression (LCM): '453.691'
AT5G17900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.739 x 10-3 149 91 62.08% 240 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1933 1473 56.75% 3406 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 4399 387 91.91% 4786 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17890 DAR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.9611'
Avg. expression score in LCM sample: '6.08494'
Tissue used: 'pure endosperm, no chalazal'
AT5G17890 DAR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '53.5408'
Avg. expression score in LCM sample: '6.08494'
Tissue used: 'full endosperm'
AT5G17890 DAR4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '28.4949'
Avg. embryo expression (LCM): '22.5426'
AT5G17890 DAR4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17890 DAR4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17890 DAR4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17880 CSA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.01039'
Avg. expression score in LCM sample: '2.04301'
Tissue used: 'pure endosperm, no chalazal'
AT5G17880 CSA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 1 0 100.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.82618'
Avg. expression score in LCM sample: '2.04301'
Tissue used: 'full endosperm'
AT5G17880 CSA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '4.34715'
Avg. embryo expression (LCM): '4.89784'
AT5G17880 CSA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17880 CSA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17880 CSA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17870 PSRP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.51948 x 10-1 266 82 110 101 76.44% 47.87% 348 211 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.686124'
Avg. expression score for this sample: '513.242'
Avg. expression score in LCM sample: '194.218'
Tissue used: 'pure endosperm, no chalazal'
AT5G17870 PSRP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.38898 x 10-1 132 51 44 103 72.13% 70.07% 183 147 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.686124'
Avg. expression score for this sample: '383.084'
Avg. expression score in LCM sample: '194.218'
Tissue used: 'full endosperm'
AT5G17870 PSRP6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.5 x 10-5 665 447 80 68 59.80% 45.95% 1112 148 TAIR8 Avg. embryo expression (dissected): '1313.86'
Avg. embryo expression (LCM): '1287.25'
AT5G17870 PSRP6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.10388 x 10-1 53 28 65.43% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17870 PSRP6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.6534 x 10-2 14 13 51.85% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17870 PSRP6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.2201 x 10-1 24 13 64.86% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17860 CAX7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 0 3 0 100.00% 0.00% 6 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.47576'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G17860 CAX7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 1 1 2 80.00% 66.67% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.82317'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G17860 CAX7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 3 2 100.00% 40.00% 2 5 TAIR8 Avg. embryo expression (dissected): '5.42016'
Avg. embryo expression (LCM): '1.26842'
AT5G17860 CAX7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17860 CAX7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.8777 x 10-2 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17860 CAX7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9 x 10-5 106 0 100.00% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.28638 x 10-1 208 87 158 216 70.51% 57.75% 295 374 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.329375'
Avg. expression score for this sample: '558.019'
Avg. expression score in LCM sample: '47.2685'
Tissue used: 'pure endosperm, no chalazal'
AT5G17850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7018 x 10-2 300 131 137 382 69.61% 73.60% 431 519 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.329375'
Avg. expression score for this sample: '461.581'
Avg. expression score in LCM sample: '47.2685'
Tissue used: 'full endosperm'
AT5G17850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.37995 x 10-1 71 43 18 7 62.28% 28.00% 114 25 TAIR8 Avg. embryo expression (dissected): '152.445'
Avg. embryo expression (LCM): '20.1942'
AT5G17850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.606 x 10-3 77 16 82.80% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1 x 10-7 50 1 98.04% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-6 112 16 87.50% 128 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17847 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.0481'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G17847 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.30569'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G17847 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G17847 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17847 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17847 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.54579 x 10-1 942 585 503 1258 61.69% 71.44% 1527 1761 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.966085'
Avg. expression score for this sample: '1714.82'
Avg. expression score in LCM sample: '480.284'
Tissue used: 'pure endosperm, no chalazal'
AT5G17840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.84176 x 10-1 493 242 327 631 67.07% 65.87% 735 958 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.966085'
Avg. expression score for this sample: '830.049'
Avg. expression score in LCM sample: '480.284'
Tissue used: 'full endosperm'
AT5G17840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.3407 x 10-2 1186 1148 264 420 50.81% 61.40% 2334 684 TAIR8 Avg. embryo expression (dissected): '2456.58'
Avg. embryo expression (LCM): '1359.69'
AT5G17840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.1 x 10-5 244 68 78.21% 312 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.41337 x 10-1 146 71 67.28% 217 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 365 20 94.81% 385 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.1576'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G17830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 2 1 0 81.82% 0.00% 11 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.31831'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G17830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '2.49815'
Avg. embryo expression (LCM): '1.5447'
AT5G17830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.41176 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.388507'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G17820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G17820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G17820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17810 WOX12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '18.5067'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G17810 WOX12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 2 0 100.00% 0.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '94.8585'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G17810 WOX12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '47.814'
Avg. embryo expression (LCM): '48.0617'
AT5G17810 WOX12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17810 WOX12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17810 WOX12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17800 MYB56 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.50059 x 10-1 77 25 35 78 75.49% 69.03% 102 113 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.898747'
Avg. expression score for this sample: '594.951'
Avg. expression score in LCM sample: '286.653'
Tissue used: 'pure endosperm, no chalazal'
AT5G17800 MYB56 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.20705 x 10-1 141 46 77 79 75.40% 50.64% 187 156 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.898747'
Avg. expression score for this sample: '733.273'
Avg. expression score in LCM sample: '286.653'
Tissue used: 'full endosperm'
AT5G17800 MYB56 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 1 2 0 4 33.33% 100.00% 3 4 TAIR8 Avg. embryo expression (dissected): '25.0629'
Avg. embryo expression (LCM): '10.7376'
AT5G17800 MYB56 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.30188 x 10-1 16 10 61.54% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17800 MYB56 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17800 MYB56 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17795 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G17795 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G17795 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G17795 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17795 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17795 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17790 VAR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 89 52 48 110 63.12% 69.62% 141 158 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085768'
Avg. expression score for this sample: '46.2566'
Avg. expression score in LCM sample: '24.913'
Tissue used: 'pure endosperm, no chalazal'
AT5G17790 VAR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.8412 x 10-2 144 60 76 228 70.59% 75.00% 204 304 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085768'
Avg. expression score for this sample: '45.0796'
Avg. expression score in LCM sample: '24.913'
Tissue used: 'full endosperm'
AT5G17790 VAR3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.33698 x 10-1 169 159 51 53 51.52% 50.96% 328 104 TAIR8 Avg. embryo expression (dissected): '100.782'
Avg. embryo expression (LCM): '95.0056'
AT5G17790 VAR3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.46758 x 10-1 22 12 64.71% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17790 VAR3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4 x 10-11 329 45 87.97% 374 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17790 VAR3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2283 x 10-2 231 66 77.78% 297 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G17780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 4 3 7 73.33% 70.00% 15 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.84768'
Avg. expression score for this sample: '11.3937'
Avg. expression score in LCM sample: '2.99837'
Tissue used: 'pure endosperm, no chalazal'
AT5G17780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.54459 x 10-1 10 6 9 9 62.50% 50.00% 16 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.84768'
Avg. expression score for this sample: '14.4724'
Avg. expression score in LCM sample: '2.99837'
Tissue used: 'full endosperm'