Displaying data sets 28401 - 28500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G18220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '3.70433'
Avg. embryo expression (LCM): '.853983'
AT5G18220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 5 50.00% 100.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.277157'
Avg. expression score for this sample: '24.1007'
Avg. expression score in LCM sample: '4.62984'
Tissue used: 'pure endosperm, no chalazal'
AT5G18210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.84541 x 10-1 10 1 1 2 90.91% 66.67% 11 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.277157'
Avg. expression score for this sample: '17.5825'
Avg. expression score in LCM sample: '4.62984'
Tissue used: 'full endosperm'
AT5G18210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 4 1 0 1 80.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '16.0529'
Avg. embryo expression (LCM): '19.7798'
AT5G18210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.87747 x 10-1 20 2 9 15 90.91% 62.50% 22 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005874'
Avg. expression score for this sample: '15.9952'
Avg. expression score in LCM sample: '25.5156'
Tissue used: 'pure endosperm, no chalazal'
AT5G18200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.77 x 10-3 55 11 26 88 83.33% 77.19% 66 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005874'
Avg. expression score for this sample: '50.3127'
Avg. expression score in LCM sample: '25.5156'
Tissue used: 'full endosperm'
AT5G18200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.6382 x 10-1 19 17 8 15 52.78% 65.22% 36 23 TAIR8 Avg. embryo expression (dissected): '43.6206'
Avg. embryo expression (LCM): '29.3871'
AT5G18200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.14912 x 10-1 23 4 85.19% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.1463 x 10-2 173 27 86.50% 200 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.467 x 10-3 231 31 88.17% 262 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.17468 x 10-1 101 37 45 99 73.19% 68.75% 138 144 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.171796'
Avg. expression score for this sample: '470.916'
Avg. expression score in LCM sample: '180.858'
Tissue used: 'pure endosperm, no chalazal'
AT5G18190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.87877 x 10-1 85 43 70 176 66.41% 71.54% 128 246 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.171796'
Avg. expression score for this sample: '388.875'
Avg. expression score in LCM sample: '180.858'
Tissue used: 'full endosperm'
AT5G18190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.83457 x 10-1 39 38 7 9 50.65% 56.25% 77 16 TAIR8 Avg. embryo expression (dissected): '222.331'
Avg. embryo expression (LCM): '139.84'
AT5G18190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.34173 x 10-1 27 7 79.41% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.70264 x 10-1 142 46 75.53% 188 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.247 x 10-3 134 29 82.21% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.0678'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G18180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.40985'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G18180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.10348'
Avg. embryo expression (LCM): '2.22287'
AT5G18180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18170 GDH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.16215 x 10-1 58 82 98 255 41.43% 72.24% 140 353 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.700967'
Avg. expression score for this sample: '142.756'
Avg. expression score in LCM sample: '45.4607'
Tissue used: 'pure endosperm, no chalazal'
AT5G18170 GDH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.87981 x 10-1 307 211 126 380 59.27% 75.10% 518 506 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.700967'
Avg. expression score for this sample: '204.405'
Avg. expression score in LCM sample: '45.4607'
Tissue used: 'full endosperm'
AT5G18170 GDH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.0696 x 10-2 208 347 134 181 37.48% 57.46% 555 315 TAIR8 Avg. embryo expression (dissected): '409.67'
Avg. embryo expression (LCM): '152.223'
AT5G18170 GDH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.94614 x 10-1 85 40 68.00% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18170 GDH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.36552 x 10-1 131 77 62.98% 208 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18170 GDH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0 x 10-7 291 77 79.08% 368 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G18160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.305581'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G18160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G18160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.11971'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G18150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.86967'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G18150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.26778'
Avg. embryo expression (LCM): '0'
AT5G18150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '48.7901'
Avg. expression score in LCM sample: '7.0697'
Tissue used: 'pure endosperm, no chalazal'
AT5G18140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '50.6674'
Avg. expression score in LCM sample: '7.0697'
Tissue used: 'full endosperm'
AT5G18140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '100.861'
Avg. embryo expression (LCM): '51.3269'
AT5G18140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.6 x 10-14 134 5 11 98 96.40% 89.91% 139 109 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-20'
Avg. expression score for this sample: '129.496'
Avg. expression score in LCM sample: '3.32173'
Tissue used: 'pure endosperm, no chalazal'
AT5G18130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4 x 10-9 106 34 31 248 75.71% 88.89% 140 279 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-20'
Avg. expression score for this sample: '133.555'
Avg. expression score in LCM sample: '3.32173'
Tissue used: 'full endosperm'
AT5G18130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.5499 x 10-2 13 1 0 2 92.86% 100.00% 14 2 TAIR8 Avg. embryo expression (dissected): '13.9131'
Avg. embryo expression (LCM): '0'
AT5G18130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.878 x 10-3 124 6 95.38% 130 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8 x 10-7 231 4 98.30% 235 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.7 x 10-18 742 10 98.67% 752 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18120 APRL7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 2 3 50.00% 60.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.70122'
Avg. expression score for this sample: '16.6627'
Avg. expression score in LCM sample: '20.1067'
Tissue used: 'pure endosperm, no chalazal'
AT5G18120 APRL7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.39468 x 10-1 8 2 13 34 80.00% 72.34% 10 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.70122'
Avg. expression score for this sample: '48.7446'
Avg. expression score in LCM sample: '20.1067'
Tissue used: 'full endosperm'
AT5G18120 APRL7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 1 1 1 75.00% 50.00% 4 2 TAIR8 Avg. embryo expression (dissected): '15.2183'
Avg. embryo expression (LCM): '16.3638'
AT5G18120 APRL7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18120 APRL7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 13 4 76.47% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18120 APRL7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.48 x 10-4 33 0 100.00% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18110 NCBP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.82555 x 10-1 141 42 42 66 77.05% 61.11% 183 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.046283'
Avg. expression score for this sample: '327.911'
Avg. expression score in LCM sample: '91.0389'
Tissue used: 'pure endosperm, no chalazal'
AT5G18110 NCBP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.6324 x 10-2 67 12 41 91 84.81% 68.94% 79 132 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.046283'
Avg. expression score for this sample: '197.68'
Avg. expression score in LCM sample: '91.0389'
Tissue used: 'full endosperm'
AT5G18110 NCBP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.64505 x 10-1 105 80 22 10 56.76% 31.25% 185 32 TAIR8 Avg. embryo expression (dissected): '359.948'
Avg. embryo expression (LCM): '158.954'
AT5G18110 NCBP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.57069 x 10-1 14 2 87.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18110 NCBP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.173 x 10-3 220 128 63.22% 348 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18110 NCBP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-6 265 41 86.60% 306 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18100 CSD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '19.5324'
Avg. expression score in LCM sample: '12.5814'
Tissue used: 'pure endosperm, no chalazal'
AT5G18100 CSD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.6488'
Avg. expression score in LCM sample: '12.5814'
Tissue used: 'full endosperm'
AT5G18100 CSD3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '29.9043'
Avg. embryo expression (LCM): '16.1252'
AT5G18100 CSD3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18100 CSD3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18100 CSD3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.57185'
Avg. expression score in LCM sample: '5.90856'
Tissue used: 'pure endosperm, no chalazal'
AT5G18090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '35.0117'
Avg. expression score in LCM sample: '5.90856'
Tissue used: 'full endosperm'
AT5G18090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.700133'
Avg. embryo expression (LCM): '0'
AT5G18090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18085 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G18085 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G18085 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G18085 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18085 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18085 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18080 SAUR24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G18080 SAUR24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.22889'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G18080 SAUR24 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G18080 SAUR24 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18080 SAUR24 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18080 SAUR24 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18070 DRT101 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.0713 x 10-2 47 16 18 74 74.60% 80.43% 63 92 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000157'
Avg. expression score for this sample: '96.8682'
Avg. expression score in LCM sample: '98.3878'
Tissue used: 'pure endosperm, no chalazal'
AT5G18070 DRT101 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.955 x 10-3 65 23 26 123 73.86% 82.55% 88 149 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000157'
Avg. expression score for this sample: '143.172'
Avg. expression score in LCM sample: '98.3878'
Tissue used: 'full endosperm'
AT5G18070 DRT101 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.60141 x 10-1 34 33 7 18 50.75% 72.00% 67 25 TAIR8 Avg. embryo expression (dissected): '83.5168'
Avg. embryo expression (LCM): '64.526'
AT5G18070 DRT101 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.07259 x 10-1 9 6 60.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18070 DRT101 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.74136 x 10-1 153 29 84.07% 182 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G18070 DRT101 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.238 x 10-3 220 31 87.65% 251 TAIR8 Mutant effect: 'N/A (not a MEG)'