GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G053311	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.55 x 10^-13	0	52	0	58	0.00%	100.00%	52	58	RefGen V2	χ2 p-value for B73 x Mo17: '5.55e-13' χ2 p-value for Mo17 x B73: '2.62e-14' Biased in favor of strain: 'Mo17'
GRMZM2G053311	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.25 x 10^-7	0	59	1	56	0.00%	98.25%	59	57	RefGen V2	χ2 p-value for B73 x Mo17: '1.73e-27' χ2 p-value for Mo17 x B73: '4.25e-07' Biased in favor of strain: 'Mo17'
GRMZM2G053299	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5494	4472	3071	9112	55.13%	74.79%	9966	12183	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G053299	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.47724 x 10^-2	3640	3026	3231	3414	54.61%	51.38%	6666	6645	RefGen V2	χ2 p-value for B73 x Mo17: '5.46e-14' χ2 p-value for Mo17 x B73: '.0247724' Biased in favor of strain: ''
GRMZM2G053236	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.414806 x 10^-1	14	10	13	12	58.33%	48.00%	24	25	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.8414806' Biased in favor of strain: ''
GRMZM2G053236	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.733281 x 10^-1	12	3	12	10	80.00%	45.45%	15	22	RefGen V2	χ2 p-value for B73 x Mo17: '.2733281' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: ''
GRMZM2G053206	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.57665 x 10^-2	486	204	144	188	70.43%	56.63%	690	332	RefGen V2	χ2 p-value for B73 x Mo17: '.0357665' χ2 p-value for Mo17 x B73: '.0001041' Biased in favor of strain: ''
GRMZM2G053206	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.252529 x 10^-1	39	9	6	11	81.25%	64.71%	48	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0000149' χ2 p-value for Mo17 x B73: '.2252529' Biased in favor of strain: ''
GRMZM2G053196	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.110701 x 10^-1	36	34	19	31	51.43%	62.00%	70	50	RefGen V2	χ2 p-value for B73 x Mo17: '.8110701' χ2 p-value for Mo17 x B73: '.089686' Biased in favor of strain: ''
GRMZM2G053196	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.169616 x 10^-1	50	53	27	57	48.54%	67.86%	103	84	RefGen V2	χ2 p-value for B73 x Mo17: '.0000955' χ2 p-value for Mo17 x B73: '.8169616' Biased in favor of strain: ''
GRMZM2G053177	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.74182 x 10^-2	33	6	21	12	84.62%	36.36%	39	33	RefGen V2	χ2 p-value for B73 x Mo17: '.0174182' χ2 p-value for Mo17 x B73: '.0002218' Biased in favor of strain: ''
GRMZM2G053177	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	1	0	66.67%	0.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G053170	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.977136 x 10^-1	87	81	67	70	51.79%	51.09%	168	137	RefGen V2	χ2 p-value for B73 x Mo17: '.6434289' χ2 p-value for Mo17 x B73: '.7977136' Biased in favor of strain: ''
GRMZM2G053170	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.483121 x 10^-1	106	93	40	83	53.27%	67.48%	199	123	RefGen V2	χ2 p-value for B73 x Mo17: '.0000607' χ2 p-value for Mo17 x B73: '.8483121' Biased in favor of strain: ''
GRMZM2G053140	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.066 x 10^-4	1727	743	1149	1600	69.92%	58.20%	2470	2749	RefGen V2	χ2 p-value for B73 x Mo17: '.0006066' χ2 p-value for Mo17 x B73: '4.80e-21' Biased in favor of strain: 'B73'
GRMZM2G053140	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.7819 x 10^-3	1739	1580	2089	1894	52.40%	47.55%	3319	3983	RefGen V2	χ2 p-value for B73 x Mo17: '.0057819' χ2 p-value for Mo17 x B73: '.002003' Biased in favor of strain: 'B73'
GRMZM2G053117	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1412 x 10^-2	9	1	9	1	90.00%	10.00%	10	10	RefGen V2	χ2 p-value for B73 x Mo17: '.011412' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: 'B73'
GRMZM2G053117	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		20	3	2	7	86.96%	77.78%	23	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0390015' χ2 p-value for Mo17 x B73: '.4795002' Biased in favor of strain: ''
GRMZM2G053083	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	567	65	348	87	89.72%	20.00%	632	435	RefGen V2	χ2 p-value for B73 x Mo17: '1.01e-34' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G053083	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.02 x 10^-6	411	283	363	250	59.22%	40.78%	694	613	RefGen V2	χ2 p-value for B73 x Mo17: '1.18e-06' χ2 p-value for Mo17 x B73: '5.02e-06' Biased in favor of strain: 'B73'
GRMZM2G053079	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.910016 x 10^-1	215	204	228	168	51.31%	42.42%	419	396	RefGen V2	χ2 p-value for B73 x Mo17: '.5910016' χ2 p-value for Mo17 x B73: '.0025688' Biased in favor of strain: ''
GRMZM2G053079	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.71 x 10^-15	331	57	235	127	85.31%	35.08%	388	362	RefGen V2	χ2 p-value for B73 x Mo17: '6.71e-15' χ2 p-value for Mo17 x B73: '3.22e-37' Biased in favor of strain: 'B73'
GRMZM2G053047	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.23 x 10^-13	393	84	341	237	82.39%	41.00%	477	578	RefGen V2	χ2 p-value for B73 x Mo17: '3.23e-13' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G053047	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.64 x 10^-6	131	66	128	58	66.50%	31.18%	197	186	RefGen V2	χ2 p-value for B73 x Mo17: '3.64e-06' χ2 p-value for Mo17 x B73: '2.86e-07' Biased in favor of strain: 'B73'
GRMZM2G053027	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.6207 x 10^-3	231	174	193	126	57.04%	39.50%	405	319	RefGen V2	χ2 p-value for B73 x Mo17: '.0046207' χ2 p-value for Mo17 x B73: '.0001759' Biased in favor of strain: 'B73'
GRMZM2G053027	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.719437 x 10^-1	308	171	199	307	64.30%	60.67%	479	506	RefGen V2	χ2 p-value for B73 x Mo17: '.2719437' χ2 p-value for Mo17 x B73: '.0042289' Biased in favor of strain: ''
GRMZM2G053023	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.2 x 10^-27	1151	285	695	661	80.15%	48.75%	1436	1356	RefGen V2	χ2 p-value for B73 x Mo17: '2.20e-27' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G053023	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.61 x 10^-7	566	206	477	336	73.32%	41.33%	772	813	RefGen V2	χ2 p-value for B73 x Mo17: '2.15e-38' χ2 p-value for Mo17 x B73: '7.61e-07' Biased in favor of strain: 'B73'
GRMZM2G053008	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	1	0	0.00%	0.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G053008	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	0		0.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G053004	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.31 x 10^-6	134	24	109	98	84.81%	47.34%	158	207	RefGen V2	χ2 p-value for B73 x Mo17: '1.31e-06' χ2 p-value for Mo17 x B73: '3.69e-09' Biased in favor of strain: 'B73'
GRMZM2G053004	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.489147 x 10^-1	60	12	29	19	83.33%	39.58%	72	48	RefGen V2	χ2 p-value for B73 x Mo17: '1.54e-08' χ2 p-value for Mo17 x B73: '.1489147' Biased in favor of strain: ''
GRMZM2G052985	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.35979 x 10^-1	187	146	166	184	56.16%	52.57%	333	350	RefGen V2	χ2 p-value for B73 x Mo17: '.0246537' χ2 p-value for Mo17 x B73: '.335979' Biased in favor of strain: ''
GRMZM2G052985	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.197911 x 10^-1	347	149	230	354	69.96%	60.62%	496	584	RefGen V2	χ2 p-value for B73 x Mo17: '.1197911' χ2 p-value for Mo17 x B73: '.0019248' Biased in favor of strain: ''
GRMZM2G052926	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.087 x 10^-4	173	46	78	71	79.00%	47.65%	219	149	RefGen V2	χ2 p-value for B73 x Mo17: '.0001087' χ2 p-value for Mo17 x B73: '8.48e-07' Biased in favor of strain: 'B73'
GRMZM2G052926	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.6 x 10^-13	471	254	346	181	64.97%	34.35%	725	527	RefGen V2	χ2 p-value for B73 x Mo17: '7.68e-16' χ2 p-value for Mo17 x B73: '6.60e-13' Biased in favor of strain: 'B73'
GRMZM2G052920	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	6	3	50.00%	33.33%	4	9	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G052920	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G052902	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	0	100.00%	0.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G052902	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	2	0	100.00%	0.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G052893	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.43315 x 10^-2	43	61	40	57	41.35%	58.76%	104	97	RefGen V2	χ2 p-value for B73 x Mo17: '.0775562' χ2 p-value for Mo17 x B73: '.0843315' Biased in favor of strain: ''
GRMZM2G052893	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.3739 x 10^-3	10	14	9	50	41.67%	84.75%	24	59	RefGen V2	χ2 p-value for B73 x Mo17: '.0093739' χ2 p-value for Mo17 x B73: '.0032208' Biased in favor of strain: 'Mo17'
GRMZM2G052880	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	10	100.00%	83.33%	1	12	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G052880	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	5	3	2	50.00%	40.00%	10	5	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G052875	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.316 x 10^-4	770	609	634	518	55.84%	44.97%	1379	1152	RefGen V2	χ2 p-value for B73 x Mo17: '.0000145' χ2 p-value for Mo17 x B73: '.0006316' Biased in favor of strain: 'B73'
GRMZM2G052875	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	2.0 x 10^-10	424	336	506	566	55.79%	52.80%	760	1072	RefGen V2	χ2 p-value for B73 x Mo17: '2.00e-10' χ2 p-value for Mo17 x B73: '5.85e-22' Biased in favor of strain: ''
GRMZM2G052869	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.23 x 10^-17	11968	8181	5657	12930	59.40%	69.56%	20149	18587	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.23e-17' Biased in favor of strain: 'Mo17'
GRMZM2G052869	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3839	13615	3235	15705	21.99%	82.92%	17454	18940	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G052855	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.446 x 10^-4	192	266	189	297	41.92%	61.11%	458	486	RefGen V2	χ2 p-value for B73 x Mo17: '.0005446' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: 'Mo17'
GRMZM2G052855	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.53922 x 10^-2	73	22	65	14	76.84%	17.72%	95	79	RefGen V2	χ2 p-value for B73 x Mo17: '.0353922' χ2 p-value for Mo17 x B73: '2.75e-20' Biased in favor of strain: ''
GRMZM2G052825	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	3	0	100.00%	0.00%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G052825	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	0	100.00%	0.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G052823	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	81	81	108	108	50.00%	50.00%	162	216	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G052823	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999804 x 10^-1	12	6	11	15	66.67%	57.69%	18	26	RefGen V2	χ2 p-value for B73 x Mo17: '.9999804' χ2 p-value for Mo17 x B73: '.3316849' Biased in favor of strain: ''
GRMZM2G052821	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	2	3	71.43%	60.00%	7	5	RefGen V2	χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: ''
GRMZM2G052821	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	3	1	4	40.00%	80.00%	5	5	RefGen V2	χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G052817	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.71 x 10^-11	182	335	138	328	35.20%	70.39%	517	466	RefGen V2	χ2 p-value for B73 x Mo17: '1.71e-11' χ2 p-value for Mo17 x B73: '1.35e-18' Biased in favor of strain: 'Mo17'
GRMZM2G052817	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.39 x 10^-11	80	105	37	242	43.24%	86.74%	185	279	RefGen V2	χ2 p-value for B73 x Mo17: '1.39e-11' χ2 p-value for Mo17 x B73: '1.14e-12' Biased in favor of strain: 'Mo17'
GRMZM2G052812	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.125685 x 10^-1	121	46	62	86	72.46%	58.11%	167	148	RefGen V2	χ2 p-value for B73 x Mo17: '.1125685' χ2 p-value for Mo17 x B73: '.0271951' Biased in favor of strain: ''
GRMZM2G052812	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.22369 x 10^-2	161	128	158	119	55.71%	42.96%	289	277	RefGen V2	χ2 p-value for B73 x Mo17: '.0522369' χ2 p-value for Mo17 x B73: '.0191149' Biased in favor of strain: ''
GRMZM2G052750	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.58 x 10^-6	952	529	626	474	64.28%	43.09%	1481	1100	RefGen V2	χ2 p-value for B73 x Mo17: '4.19e-28' χ2 p-value for Mo17 x B73: '4.58e-06' Biased in favor of strain: 'B73'
GRMZM2G052750	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.32 x 10^-5	355	111	212	264	76.18%	55.46%	466	476	RefGen V2	χ2 p-value for B73 x Mo17: '.0000132' χ2 p-value for Mo17 x B73: '2.15e-07' Biased in favor of strain: 'B73'
GRMZM2G052699	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.531499 x 10^-1	58	33	36	55	63.74%	60.44%	91	91	RefGen V2	χ2 p-value for B73 x Mo17: '.5531499' χ2 p-value for Mo17 x B73: '.2076245' Biased in favor of strain: ''
GRMZM2G052699	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.913659 x 10^-1	104	92	55	94	53.06%	63.09%	196	149	RefGen V2	χ2 p-value for B73 x Mo17: '.3913659' χ2 p-value for Mo17 x B73: '.0013983' Biased in favor of strain: ''
GRMZM2G052696	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G052696	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	0	1	100.00%	100.00%	7	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G052688	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.087442 x 10^-1	77	35	41	88	68.75%	68.22%	112	129	RefGen V2	χ2 p-value for B73 x Mo17: '.6400288' χ2 p-value for Mo17 x B73: '.7087442' Biased in favor of strain: ''
GRMZM2G052688	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.373532 x 10^-1	261	233	194	179	52.83%	47.99%	494	373	RefGen V2	χ2 p-value for B73 x Mo17: '.2077489' χ2 p-value for Mo17 x B73: '.4373532' Biased in favor of strain: ''
GRMZM2G052671	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.047 x 10^-4	73	128	54	131	36.32%	70.81%	201	185	RefGen V2	χ2 p-value for B73 x Mo17: '.0001047' χ2 p-value for Mo17 x B73: '1.50e-08' Biased in favor of strain: 'Mo17'
GRMZM2G052671	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.9678 x 10^-3	57	12	38	37	82.61%	49.33%	69	75	RefGen V2	χ2 p-value for B73 x Mo17: '.0049678' χ2 p-value for Mo17 x B73: '.0014509' Biased in favor of strain: 'B73'
GRMZM2G052670	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.71975 x 10^-2	225	91	200	299	71.20%	59.92%	316	499	RefGen V2	χ2 p-value for B73 x Mo17: '.0871975' χ2 p-value for Mo17 x B73: '.0013882' Biased in favor of strain: ''
GRMZM2G052670	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.989403 x 10^-1	123	108	123	125	53.25%	50.40%	231	248	RefGen V2	χ2 p-value for B73 x Mo17: '.3236782' χ2 p-value for Mo17 x B73: '.8989403' Biased in favor of strain: ''
GRMZM2G052667	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2176	706	1901	703	75.50%	27.00%	2882	2604	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G052667	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1438	359	980	914	80.02%	48.26%	1797	1894	RefGen V2	χ2 p-value for B73 x Mo17: '3.15e-33' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G052666	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.41579 x 10^-1	132	86	30	82	60.55%	73.21%	218	112	RefGen V2	χ2 p-value for B73 x Mo17: '.0553996' χ2 p-value for Mo17 x B73: '.141579' Biased in favor of strain: ''
GRMZM2G052666	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.378097 x 10^-1	250	155	192	164	61.73%	46.07%	405	356	RefGen V2	χ2 p-value for B73 x Mo17: '2.35e-06' χ2 p-value for Mo17 x B73: '.1378097' Biased in favor of strain: ''
GRMZM2G052658	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.70067 x 10^-1	33	22	21	13	60.00%	38.24%	55	34	RefGen V2	χ2 p-value for B73 x Mo17: '.1380107' χ2 p-value for Mo17 x B73: '.170067' Biased in favor of strain: ''
GRMZM2G052658	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		14	4	1	7	77.78%	87.50%	18	8	RefGen V2	χ2 p-value for B73 x Mo17: '.3173186' χ2 p-value for Mo17 x B73: '.2112996' Biased in favor of strain: ''
GRMZM2G052654	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.25109 x 10^-2	24	4	13	4	85.71%	23.53%	28	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0325109' χ2 p-value for Mo17 x B73: '.0001613' Biased in favor of strain: ''
GRMZM2G052654	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.170751 x 10^-1	9	7	15	4	56.25%	21.05%	16	19	RefGen V2	χ2 p-value for B73 x Mo17: '.6170751' χ2 p-value for Mo17 x B73: '.0116169' Biased in favor of strain: ''
GRMZM2G052650	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.42 x 10^-10	292	148	315	179	66.36%	36.23%	440	494	RefGen V2	χ2 p-value for B73 x Mo17: '6.65e-12' χ2 p-value for Mo17 x B73: '9.42e-10' Biased in favor of strain: 'B73'
GRMZM2G052650	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.14 x 10^-9	133	15	74	18	89.86%	19.57%	148	92	RefGen V2	χ2 p-value for B73 x Mo17: '2.14e-09' χ2 p-value for Mo17 x B73: '9.36e-22' Biased in favor of strain: 'B73'
GRMZM2G052644	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.864275 x 10^-1	9	2	6	5	81.82%	45.45%	11	11	RefGen V2	χ2 p-value for B73 x Mo17: '.2864275' χ2 p-value for Mo17 x B73: '.135593' Biased in favor of strain: ''
GRMZM2G052644	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.22036 x 10^-2	10	3	14	0	76.92%	0.00%	13	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0522036' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: ''
GRMZM2G052630	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.15 x 10^-9	387	163	300	174	70.36%	36.71%	550	474	RefGen V2	χ2 p-value for B73 x Mo17: '1.28e-21' χ2 p-value for Mo17 x B73: '7.15e-09' Biased in favor of strain: 'B73'
GRMZM2G052630	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1136	155	534	299	87.99%	35.89%	1291	833	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G052619	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	536	40	347	59	93.06%	14.53%	576	406	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G052619	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	270	19	231	20	93.43%	7.97%	289	251	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G052616	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.36516 x 10^-2	57	13	33	17	81.43%	34.00%	70	50	RefGen V2	χ2 p-value for B73 x Mo17: '1.45e-07' χ2 p-value for Mo17 x B73: '.0236516' Biased in favor of strain: 'B73'
GRMZM2G052616	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.47 x 10^-24	573	99	257	158	85.27%	38.07%	672	415	RefGen V2	χ2 p-value for B73 x Mo17: '1.47e-24' χ2 p-value for Mo17 x B73: '4.47e-35' Biased in favor of strain: 'B73'
GRMZM2G052610	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	6	0	100.00%	0.00%	2	6	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: ''
GRMZM2G052610	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G052586	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	7	0	100.00%	0.00%	3	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: ''
GRMZM2G052586	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G052581	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.27692 x 10^-2	248	96	144	219	72.09%	60.33%	344	363	RefGen V2	χ2 p-value for B73 x Mo17: '.0327692' χ2 p-value for Mo17 x B73: '.0104422' Biased in favor of strain: ''
GRMZM2G052581	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.73 x 10^-8	541	296	606	425	64.64%	41.22%	837	1031	RefGen V2	χ2 p-value for B73 x Mo17: '2.49e-17' χ2 p-value for Mo17 x B73: '1.73e-08' Biased in favor of strain: 'B73'
GRMZM2G052571	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	5	1	8	16.67%	88.89%	6	9	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.0196307' Biased in favor of strain: ''
GRMZM2G052571	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	18	0	9	0.00%	100.00%	18	9	RefGen V2	χ2 p-value for B73 x Mo17: '1.97e-09' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: ''
GRMZM2G052569	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G052569	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	6	3	3	50.00%	50.00%	12	6	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''

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