| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G554653 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.62 x 10-14 | 0 | 58 | 1 | 79 | 0.00% | 98.75% | 58 | 80 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.62e-14' χ2 p-value for Mo17 x B73: '2.77e-18' Biased in favor of strain: 'Mo17' |
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| GRMZM2G554653 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.5515 x 10-3 | 4 | 12 | 0 | 17 | 25.00% | 100.00% | 16 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004069' χ2 p-value for Mo17 x B73: '.0035515' Biased in favor of strain: 'Mo17' |
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| GRMZM2G553532 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.37094 x 10-1 | 48 | 24 | 23 | 19 | 66.67% | 45.24% | 72 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.537094' Biased in favor of strain: '' |
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| GRMZM2G553532 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.15486 x 10-2 | 64 | 21 | 72 | 30 | 75.29% | 29.41% | 85 | 102 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0915486' χ2 p-value for Mo17 x B73: '1.44e-15' Biased in favor of strain: '' |
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| GRMZM2G552966 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.857 x 10-4 | 7 | 28 | 2 | 22 | 20.00% | 91.67% | 35 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003857' χ2 p-value for Mo17 x B73: '.0000446' Biased in favor of strain: 'Mo17' |
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| GRMZM2G552966 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.27074 x 10-1 | 12 | 8 | 8 | 2 | 60.00% | 20.00% | 20 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.527074' χ2 p-value for Mo17 x B73: '.0017451' Biased in favor of strain: '' |
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| GRMZM2G552322 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.42 x 10-7 | 513 | 696 | 462 | 746 | 42.43% | 61.75% | 1209 | 1208 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.42e-07' χ2 p-value for Mo17 x B73: '3.05e-16' Biased in favor of strain: 'Mo17' |
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| GRMZM2G552322 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.74 x 10-4 | 545 | 352 | 305 | 822 | 60.76% | 72.94% | 897 | 1127 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000174' χ2 p-value for Mo17 x B73: '7.99e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G552278 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.224607 x 10-1 | 35 | 31 | 9 | 18 | 53.03% | 66.67% | 66 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6224607' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G552278 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.58613 x 10-2 | 144 | 47 | 82 | 116 | 75.39% | 58.59% | 191 | 198 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0105226' χ2 p-value for Mo17 x B73: '.0158613' Biased in favor of strain: '' |
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| GRMZM2G552160 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 0 | 100.00% | 0.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G552160 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G551565 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G551565 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 10 | 100.00% | 100.00% | 1 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G551402 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173105 x 10-1 | 78 | 50 | 55 | 45 | 60.94% | 45.00% | 128 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0133283' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G551402 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.6425 x 10-3 | 111 | 31 | 112 | 72 | 78.17% | 39.13% | 142 | 184 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0036425' χ2 p-value for Mo17 x B73: '2.31e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G551108 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G551108 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 2 | 100.00% | 100.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G550865 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.75 x 10-7 | 182 | 37 | 122 | 55 | 83.11% | 31.07% | 219 | 177 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.15e-22' χ2 p-value for Mo17 x B73: '4.75e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G550865 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.61 x 10-10 | 162 | 20 | 102 | 46 | 89.01% | 31.08% | 182 | 148 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.61e-10' χ2 p-value for Mo17 x B73: '4.17e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G549512 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 3 | 4 | 100.00% | 57.14% | 6 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G549512 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 5 | 3 | 100.00% | 37.50% | 1 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: '' |
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| GRMZM2G548261 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G548261 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 0 | 0 | 100.00% | 5 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G547542 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1307 | 612 | 1135 | 586 | 68.11% | 34.05% | 1919 | 1721 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G547542 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.76 x 10-7 | 1590 | 624 | 937 | 1496 | 71.82% | 61.49% | 2214 | 2433 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.76e-07' χ2 p-value for Mo17 x B73: '6.00e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G546452 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.948866 x 10-1 | 16 | 7 | 14 | 12 | 69.57% | 46.15% | 23 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0605689' χ2 p-value for Mo17 x B73: '.6948866' Biased in favor of strain: '' |
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| GRMZM2G546452 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630069 x 10-1 | 14 | 8 | 5 | 21 | 63.64% | 80.77% | 22 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7630069' χ2 p-value for Mo17 x B73: '.127153' Biased in favor of strain: '' |
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| GRMZM2G546369 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G546369 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 7 | 100.00% | 0 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G546175 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 8 | 0 | 6 | 0.00% | 100.00% | 8 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G546175 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 4 | 0.00% | 100.00% | 3 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G546081 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.18 x 10-24 | 842 | 397 | 599 | 298 | 67.96% | 33.22% | 1239 | 897 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.23e-36' χ2 p-value for Mo17 x B73: '9.18e-24' Biased in favor of strain: 'B73' |
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| GRMZM2G546081 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.27 x 10-13 | 588 | 137 | 315 | 364 | 81.10% | 53.61% | 725 | 679 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.64e-16' χ2 p-value for Mo17 x B73: '5.27e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G545891 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.68 x 10-10 | 252 | 116 | 244 | 123 | 68.48% | 33.51% | 368 | 367 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.35e-12' χ2 p-value for Mo17 x B73: '2.68e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G545891 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.75 x 10-9 | 410 | 111 | 222 | 210 | 78.69% | 48.61% | 521 | 432 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.75e-09' χ2 p-value for Mo17 x B73: '1.71e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G545802 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.73 x 10-27 | 199 | 0 | 118 | 0 | 100.00% | 0.00% | 199 | 118 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.73e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G545802 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.85 x 10-21 | 181 | 0 | 99 | 0 | 100.00% | 0.00% | 181 | 99 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.85e-21' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G545615 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 5 | 1 | 66.67% | 16.67% | 3 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |
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| GRMZM2G545615 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G545326 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.27 x 10-9 | 893 | 606 | 606 | 415 | 59.57% | 40.65% | 1499 | 1021 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.24e-13' χ2 p-value for Mo17 x B73: '2.27e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G545326 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0359 x 10-3 | 703 | 283 | 334 | 453 | 71.30% | 57.56% | 986 | 787 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0020359' χ2 p-value for Mo17 x B73: '5.99e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G544539 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 8 | 4 | 5 | 20.00% | 55.56% | 10 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0577796' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G544539 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 11 | 100.00% | 0 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G543629 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.482131 x 10-1 | 14 | 0 | 4 | 8 | 100.00% | 66.67% | 14 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: '' |
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| GRMZM2G543629 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.532774 x 10-1 | 51 | 21 | 25 | 8 | 70.83% | 24.24% | 72 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4532774' χ2 p-value for Mo17 x B73: '2.34e-07' Biased in favor of strain: '' |
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| GRMZM2G542994 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1431 | 333 | 1386 | 297 | 81.12% | 17.65% | 1764 | 1683 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G542994 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.34 x 10-26 | 570 | 93 | 345 | 165 | 85.97% | 32.35% | 663 | 510 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.34e-26' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G542847 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G542847 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 9 | 100.00% | 100.00% | 1 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: '' |
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| GRMZM2G542591 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G542591 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 0 | 0 | 100.00% | 10 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G542227 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G542227 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 2 | 100.00% | 66.67% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G541687 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 3 | 0 | 9 | 75.00% | 100.00% | 12 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G541687 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 7.25 x 10-14 | 113 | 0 | 0 | 112 | 100.00% | 100.00% | 113 | 112 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.62e-14' χ2 p-value for Mo17 x B73: '7.25e-14' Biased in favor of strain: '' |
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| GRMZM2G540772 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.075784 x 10-1 | 30 | 21 | 37 | 25 | 58.82% | 40.32% | 51 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2075784' χ2 p-value for Mo17 x B73: '.1275083' Biased in favor of strain: '' |
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| GRMZM2G540772 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 8 | 8 | 0 | 20.00% | 0.00% | 10 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001745' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: '' |
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| GRMZM2G540491 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 9 | 0 | 100.00% | 0.00% | 9 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G540491 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.07 x 10-4 | 25 | 0 | 14 | 0 | 100.00% | 0.00% | 25 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000407' χ2 p-value for Mo17 x B73: '1.21e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G540403 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.88 x 10-13 | 916 | 627 | 990 | 659 | 59.36% | 39.96% | 1543 | 1649 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.88e-13' χ2 p-value for Mo17 x B73: '3.61e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G540403 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.19 x 10-5 | 1163 | 466 | 582 | 828 | 71.39% | 58.72% | 1629 | 1410 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000519' χ2 p-value for Mo17 x B73: '2.50e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G539821 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.2 x 10-24 | 103 | 0 | 101 | 0 | 100.00% | 0.00% | 103 | 101 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.35e-24' χ2 p-value for Mo17 x B73: '9.20e-24' Biased in favor of strain: 'B73' |
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| GRMZM2G539821 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.6 x 10-18 | 156 | 1 | 85 | 5 | 99.36% | 5.56% | 157 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.60e-18' χ2 p-value for Mo17 x B73: '9.24e-35' Biased in favor of strain: 'B73' |
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| GRMZM2G539790 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.62 x 10-6 | 0 | 40 | 0 | 23 | 0.00% | 100.00% | 40 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.54e-10' χ2 p-value for Mo17 x B73: '1.62e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G539790 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6998 x 10-3 | 0 | 20 | 0 | 18 | 0.00% | 100.00% | 20 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.54e-10' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: 'Mo17' |
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| GRMZM2G538535 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 9 | 100.00% | 81.82% | 1 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: '' |
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| GRMZM2G538535 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.53478 x 10-2 | 10 | 0 | 0 | 12 | 100.00% | 100.00% | 10 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G537770 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 256 | 2 | 160 | 5 | 99.22% | 3.03% | 258 | 165 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.58e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G537770 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1392 | 12 | 384 | 28 | 99.15% | 6.80% | 1404 | 412 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G537291 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.921 x 10-4 | 116 | 67 | 104 | 54 | 63.39% | 34.18% | 183 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002921' χ2 p-value for Mo17 x B73: '.0000696' Biased in favor of strain: 'B73' |
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| GRMZM2G537291 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.0709 x 10-3 | 118 | 35 | 54 | 55 | 77.12% | 50.46% | 153 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0060709' χ2 p-value for Mo17 x B73: '.0003312' Biased in favor of strain: 'B73' |
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| GRMZM2G536825 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.545395 x 10-1 | 21 | 13 | 24 | 18 | 61.76% | 42.86% | 34 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.170067' χ2 p-value for Mo17 x B73: '.3545395' Biased in favor of strain: '' |
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| GRMZM2G536825 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G536644 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.780884 x 10-1 | 84 | 86 | 82 | 74 | 49.41% | 47.44% | 170 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8780884' χ2 p-value for Mo17 x B73: '.5218394' Biased in favor of strain: '' |
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| GRMZM2G536644 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.574913 x 10-1 | 42 | 20 | 35 | 50 | 67.74% | 58.82% | 62 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8574913' χ2 p-value for Mo17 x B73: '.1250468' Biased in favor of strain: '' |
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| GRMZM2G536238 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.38578 x 10-1 | 9 | 6 | 11 | 3 | 60.00% | 21.43% | 15 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.438578' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: '' |
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| GRMZM2G536238 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G536120 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 8 | 0 | 100.00% | 0.00% | 2 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G536120 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G534116 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.22 x 10-7 | 231 | 135 | 212 | 94 | 63.11% | 30.72% | 366 | 306 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.22e-07' χ2 p-value for Mo17 x B73: '1.52e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G534116 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999995 x 10-1 | 95 | 34 | 48 | 96 | 73.64% | 66.67% | 129 | 144 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0927827' χ2 p-value for Mo17 x B73: '.9999995' Biased in favor of strain: '' |
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| GRMZM2G532387 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.47 x 10-6 | 70 | 5 | 58 | 18 | 93.33% | 23.68% | 75 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.12e-14' χ2 p-value for Mo17 x B73: '4.47e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G532387 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 458 | 31 | 169 | 33 | 93.66% | 16.34% | 489 | 202 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.53e-37' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G531738 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.944337 x 10-1 | 250 | 274 | 177 | 239 | 47.71% | 57.45% | 524 | 416 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2944337' χ2 p-value for Mo17 x B73: '.0023674' Biased in favor of strain: '' |
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| GRMZM2G531738 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.521783 x 10-1 | 344 | 175 | 194 | 468 | 66.28% | 70.69% | 519 | 662 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8521783' χ2 p-value for Mo17 x B73: '.0279065' Biased in favor of strain: '' |
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| GRMZM2G531719 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 15 | 10 | 14 | 14 | 60.00% | 50.00% | 25 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G531719 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G529859 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.359238 x 10-1 | 224 | 141 | 114 | 129 | 61.37% | 53.09% | 365 | 243 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000014' χ2 p-value for Mo17 x B73: '.3359238' Biased in favor of strain: '' |
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| GRMZM2G529859 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G529768 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 3 | 0.00% | 100.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G529768 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G529313 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.547208 x 10-1 | 10 | 7 | 11 | 9 | 58.82% | 45.00% | 17 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4668543' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G529313 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.434122 x 10-1 | 13 | 8 | 4 | 11 | 61.90% | 73.33% | 21 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6434122' χ2 p-value for Mo17 x B73: '.5838825' Biased in favor of strain: '' |
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| GRMZM2G529003 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 30 | 0 | 7 | 0.00% | 100.00% | 30 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.32e-08' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G529003 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 0 | 10 | 0.00% | 100.00% | 5 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G528502 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.569972 x 10-1 | 208 | 137 | 191 | 185 | 60.29% | 49.20% | 345 | 376 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001321' χ2 p-value for Mo17 x B73: '.7569972' Biased in favor of strain: '' |
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| GRMZM2G528502 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.43007 x 10-2 | 252 | 98 | 192 | 272 | 72.00% | 58.62% | 350 | 464 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0343007' χ2 p-value for Mo17 x B73: '.0002364' Biased in favor of strain: '' |
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| GRMZM2G528283 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.468653 x 10-1 | 95 | 72 | 64 | 71 | 56.89% | 52.59% | 167 | 135 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0751098' χ2 p-value for Mo17 x B73: '.5468653' Biased in favor of strain: '' |
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| GRMZM2G528283 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.32746 x 10-1 | 32 | 20 | 13 | 18 | 61.54% | 58.06% | 52 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.432746' χ2 p-value for Mo17 x B73: '.3096288' Biased in favor of strain: '' |