| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G056903 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.175247 x 10-1 | 123 | 14 | 37 | 53 | 89.78% | 58.89% | 137 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.52e-09' χ2 p-value for Mo17 x B73: '.1175247' Biased in favor of strain: '' |
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| GRMZM2G056903 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.66 x 10-20 | 207 | 57 | 217 | 55 | 78.41% | 20.22% | 264 | 272 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.66e-20' χ2 p-value for Mo17 x B73: '8.99e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G056889 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.57929 x 10-2 | 43 | 23 | 48 | 31 | 65.15% | 39.24% | 66 | 79 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.013823' χ2 p-value for Mo17 x B73: '.0557929' Biased in favor of strain: '' |
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| GRMZM2G056889 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.31 x 10-5 | 61 | 6 | 21 | 2 | 91.04% | 8.70% | 67 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000231' χ2 p-value for Mo17 x B73: '3.69e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G056867 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.37 x 10-13 | 102 | 14 | 81 | 12 | 87.93% | 12.90% | 116 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.07e-16' χ2 p-value for Mo17 x B73: '8.37e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G056867 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.58 x 10-5 | 38 | 1 | 41 | 16 | 97.44% | 28.07% | 39 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000458' χ2 p-value for Mo17 x B73: '6.35e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G056799 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.56011 x 10-2 | 6 | 24 | 4 | 25 | 20.00% | 86.21% | 30 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.89e-08' χ2 p-value for Mo17 x B73: '.0256011' Biased in favor of strain: '' |
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| GRMZM2G056799 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.44 x 10-5 | 22 | 85 | 14 | 45 | 20.56% | 76.27% | 107 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.13e-09' χ2 p-value for Mo17 x B73: '.0000544' Biased in favor of strain: 'Mo17' |
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| GRMZM2G056773 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.040044 x 10-1 | 141 | 130 | 150 | 110 | 52.03% | 42.31% | 271 | 260 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5040044' χ2 p-value for Mo17 x B73: '.0131127' Biased in favor of strain: '' |
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| GRMZM2G056773 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.089253 x 10-1 | 105 | 60 | 89 | 127 | 63.64% | 58.80% | 165 | 216 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4089253' χ2 p-value for Mo17 x B73: '.0141379' Biased in favor of strain: '' |
||||
| GRMZM2G056772 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.904304 x 10-1 | 22 | 20 | 10 | 32 | 52.38% | 76.19% | 42 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0495303' χ2 p-value for Mo17 x B73: '.1904304' Biased in favor of strain: '' |
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| GRMZM2G056772 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.32 x 10-4 | 71 | 17 | 72 | 36 | 80.68% | 33.33% | 88 | 108 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.59e-09' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: 'B73' |
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| GRMZM2G056762 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.937686 x 10-1 | 25 | 11 | 13 | 9 | 69.44% | 40.91% | 36 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0196307' χ2 p-value for Mo17 x B73: '.3937686' Biased in favor of strain: '' |
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| GRMZM2G056762 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 2 | 1 | 1 | 83.33% | 50.00% | 12 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.220676' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G056750 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.24 x 10-13 | 125 | 4 | 45 | 0 | 96.90% | 0.00% | 129 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.24e-13' χ2 p-value for Mo17 x B73: '2.38e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G056750 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.99 x 10-14 | 129 | 34 | 310 | 49 | 79.14% | 13.65% | 163 | 359 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.99e-14' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G056732 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.184152 x 10-1 | 349 | 265 | 402 | 388 | 56.84% | 49.11% | 614 | 790 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000699' χ2 p-value for Mo17 x B73: '.6184152' Biased in favor of strain: '' |
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| GRMZM2G056732 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.808938 x 10-1 | 410 | 249 | 144 | 263 | 62.22% | 64.62% | 659 | 407 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0153469' χ2 p-value for Mo17 x B73: '.3808938' Biased in favor of strain: '' |
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| GRMZM2G056697 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 0 | 7 | 0.00% | 100.00% | 6 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0613688' Biased in favor of strain: '' |
|||||
| GRMZM2G056697 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.32 x 10-4 | 0 | 18 | 0 | 12 | 0.00% | 100.00% | 18 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: 'Mo17' |
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| GRMZM2G056686 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.215555 x 10-1 | 128 | 154 | 108 | 199 | 45.39% | 64.82% | 282 | 307 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1215555' χ2 p-value for Mo17 x B73: '2.06e-07' Biased in favor of strain: '' |
||||
| GRMZM2G056686 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.46 x 10-8 | 135 | 183 | 53 | 238 | 42.45% | 81.79% | 318 | 291 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.20e-20' χ2 p-value for Mo17 x B73: '4.46e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G056661 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 2 | 1 | 100.00% | 33.33% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM2G056661 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 1 | 0 | 0.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
|||||
| GRMZM2G056645 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.78389 x 10-2 | 678 | 545 | 474 | 415 | 55.44% | 46.68% | 1223 | 889 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001429' χ2 p-value for Mo17 x B73: '.0478389' Biased in favor of strain: 'B73' |
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| GRMZM2G056645 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.608 x 10-4 | 899 | 355 | 645 | 958 | 71.69% | 59.76% | 1254 | 1603 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001608' χ2 p-value for Mo17 x B73: '4.53e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G056632 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.367743 x 10-1 | 129 | 57 | 123 | 129 | 69.35% | 51.19% | 186 | 252 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4367743' χ2 p-value for Mo17 x B73: '1.87e-07' Biased in favor of strain: '' |
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| GRMZM2G056632 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.727801 x 10-1 | 80 | 88 | 77 | 79 | 47.62% | 50.64% | 168 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.537094' χ2 p-value for Mo17 x B73: '.8727801' Biased in favor of strain: '' |
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| GRMZM2G056627 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 1 | 0.00% | 100.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G056627 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 8 | 100.00% | 0 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G056612 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1095 | 214 | 643 | 360 | 83.65% | 35.89% | 1309 | 1003 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.66e-39' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G056612 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1000 | 180 | 1076 | 181 | 84.75% | 14.40% | 1180 | 1257 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G056608 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.854738 x 10-1 | 50 | 32 | 40 | 31 | 60.98% | 43.66% | 82 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0468374' χ2 p-value for Mo17 x B73: '.2854738' Biased in favor of strain: '' |
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| GRMZM2G056608 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.59414 x 10-2 | 44 | 11 | 17 | 13 | 80.00% | 43.33% | 55 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0359414' χ2 p-value for Mo17 x B73: '.0067063' Biased in favor of strain: '' |
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| GRMZM2G056606 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.61965 x 10-2 | 38 | 10 | 46 | 38 | 79.17% | 45.24% | 48 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0661965' χ2 p-value for Mo17 x B73: '.000031' Biased in favor of strain: '' |
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| GRMZM2G056606 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.003482 x 10-1 | 69 | 51 | 44 | 19 | 57.50% | 30.16% | 120 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1003482' χ2 p-value for Mo17 x B73: '.0016344' Biased in favor of strain: '' |
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| GRMZM2G056600 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.222364 x 10-1 | 69 | 52 | 101 | 63 | 57.02% | 38.41% | 121 | 164 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1222364' χ2 p-value for Mo17 x B73: '.0030043' Biased in favor of strain: '' |
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| GRMZM2G056600 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.495282 x 10-1 | 46 | 32 | 22 | 70 | 58.97% | 76.09% | 78 | 92 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1495282' χ2 p-value for Mo17 x B73: '.0552703' Biased in favor of strain: '' |
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| GRMZM2G056573 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.210867 x 10-1 | 92 | 38 | 55 | 85 | 70.77% | 60.71% | 130 | 140 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3210867' χ2 p-value for Mo17 x B73: '.1351661' Biased in favor of strain: '' |
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| GRMZM2G056573 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 67 | 44 | 49 | 49 | 60.36% | 50.00% | 111 | 98 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0290311' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G056572 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.239688 x 10-1 | 443 | 379 | 454 | 435 | 53.89% | 48.93% | 822 | 889 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.025598' χ2 p-value for Mo17 x B73: '.5239688' Biased in favor of strain: '' |
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| GRMZM2G056572 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.31508 x 10-2 | 887 | 375 | 448 | 790 | 70.29% | 63.81% | 1262 | 1238 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0063955' χ2 p-value for Mo17 x B73: '.0331508' Biased in favor of strain: '' |
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| GRMZM2G056564 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.0294 x 10-3 | 263 | 92 | 193 | 180 | 74.08% | 48.26% | 355 | 373 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0030294' χ2 p-value for Mo17 x B73: '4.62e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G056564 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.4385 x 10-3 | 211 | 139 | 200 | 147 | 60.29% | 42.36% | 350 | 347 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001188' χ2 p-value for Mo17 x B73: '.0044385' Biased in favor of strain: 'B73' |
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| GRMZM2G056524 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 2 | 0 | 100.00% | 0.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G056524 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G056513 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.53 x 10-7 | 178 | 154 | 99 | 488 | 53.61% | 83.13% | 332 | 587 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.53e-07' χ2 p-value for Mo17 x B73: '2.59e-17' Biased in favor of strain: 'Mo17' |
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| GRMZM2G056513 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.13 x 10-7 | 288 | 171 | 308 | 192 | 62.75% | 38.40% | 459 | 500 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.73e-08' χ2 p-value for Mo17 x B73: '2.13e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G056501 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 0 | 6 | 25.00% | 100.00% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G056501 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 0 | 1 | 66.67% | 100.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G056467 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 3 | 8 | 72.73% | 0 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G056467 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.750505 x 10-1 | 7 | 18 | 27 | 22 | 28.00% | 44.90% | 25 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0278069' χ2 p-value for Mo17 x B73: '.4750505' Biased in favor of strain: '' |
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| GRMZM2G056462 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.83 x 10-11 | 463 | 268 | 380 | 221 | 63.34% | 36.77% | 731 | 601 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.50e-13' χ2 p-value for Mo17 x B73: '8.83e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G056462 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.829 x 10-4 | 455 | 166 | 240 | 282 | 73.27% | 54.02% | 621 | 522 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004829' χ2 p-value for Mo17 x B73: '8.90e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G056442 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G056442 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G056407 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.65 x 10-9 | 242 | 35 | 75 | 19 | 87.36% | 20.21% | 277 | 94 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.64e-35' χ2 p-value for Mo17 x B73: '7.65e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G056407 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 5 | 0 | 1 | 61.54% | 100.00% | 13 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.694873' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G056403 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.16402 x 10-2 | 135 | 47 | 104 | 125 | 74.18% | 54.59% | 182 | 229 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0316402' χ2 p-value for Mo17 x B73: '.0001052' Biased in favor of strain: '' |
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| GRMZM2G056403 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.656 x 10-4 | 272 | 149 | 230 | 156 | 64.61% | 40.41% | 421 | 386 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.04e-09' χ2 p-value for Mo17 x B73: '.0001656' Biased in favor of strain: 'B73' |
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| GRMZM2G056400 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.277539 x 10-1 | 41 | 56 | 39 | 90 | 42.27% | 69.77% | 97 | 129 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1277539' χ2 p-value for Mo17 x B73: '7.11e-06' Biased in favor of strain: '' |
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| GRMZM2G056400 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G056393 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.29 x 10-11 | 94 | 2 | 33 | 3 | 97.92% | 8.33% | 96 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.29e-11' χ2 p-value for Mo17 x B73: '1.13e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G056393 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.27 x 10-13 | 100 | 5 | 71 | 7 | 95.24% | 8.97% | 105 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.84e-20' χ2 p-value for Mo17 x B73: '4.27e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G056377 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G056377 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G056373 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 4 | 0 | 6 | 20.00% | 100.00% | 5 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0268555' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G056373 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 1 | 3 | 50.00% | 75.00% | 6 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G056369 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 703 | 200 | 747 | 196 | 77.85% | 20.78% | 903 | 943 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G056369 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.368 x 10-4 | 61 | 65 | 5 | 50 | 48.41% | 90.91% | 126 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000138' χ2 p-value for Mo17 x B73: '.0001368' Biased in favor of strain: 'Mo17' |
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| GRMZM2G056365 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.327761 x 10-1 | 10 | 3 | 11 | 11 | 76.92% | 50.00% | 13 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4327761' χ2 p-value for Mo17 x B73: '.0972544' Biased in favor of strain: '' |
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| GRMZM2G056365 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.75562 x 10-2 | 61 | 43 | 57 | 34 | 58.65% | 37.36% | 104 | 91 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0775562' χ2 p-value for Mo17 x B73: '.0159064' Biased in favor of strain: '' |
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| GRMZM2G056355 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.076971 x 10-1 | 208 | 152 | 177 | 148 | 57.78% | 45.54% | 360 | 325 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0031628' χ2 p-value for Mo17 x B73: '.1076971' Biased in favor of strain: '' |
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| GRMZM2G056355 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.004324 x 10-1 | 88 | 34 | 73 | 90 | 72.13% | 55.21% | 122 | 163 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2004324' χ2 p-value for Mo17 x B73: '.0019251' Biased in favor of strain: '' |
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| GRMZM2G056350 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 8255 | 1051 | 3948 | 1984 | 88.71% | 33.45% | 9306 | 5932 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G056350 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4601 | 1296 | 3126 | 1161 | 78.02% | 27.08% | 5897 | 4287 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G056303 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.142162 x 10-1 | 14 | 32 | 10 | 14 | 30.43% | 58.33% | 46 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0079554' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G056303 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 8 | 0 | 100.00% | 0.00% | 6 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: '' |
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| GRMZM2G056270 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.4907 x 10-2 | 1101 | 482 | 406 | 695 | 69.55% | 63.12% | 1583 | 1101 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.014907' χ2 p-value for Mo17 x B73: '.0126556' Biased in favor of strain: '' |
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| GRMZM2G056270 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.415992 x 10-1 | 396 | 294 | 301 | 266 | 57.39% | 46.91% | 690 | 567 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001031' χ2 p-value for Mo17 x B73: '.1415992' Biased in favor of strain: '' |
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| GRMZM2G056252 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3023 | 1662 | 3319 | 2150 | 64.53% | 39.31% | 4685 | 5469 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G056252 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.15524 x 10-2 | 1710 | 774 | 1644 | 2297 | 68.84% | 58.28% | 2484 | 3941 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0215524' χ2 p-value for Mo17 x B73: '6.23e-29' Biased in favor of strain: '' |
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| GRMZM2G056166 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.15 x 10-5 | 507 | 159 | 281 | 415 | 76.13% | 59.63% | 666 | 696 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.24e-07' χ2 p-value for Mo17 x B73: '.0000815' Biased in favor of strain: 'B73' |
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| GRMZM2G056166 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.345 x 10-3 | 517 | 323 | 346 | 273 | 61.55% | 44.10% | 840 | 619 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.18e-11' χ2 p-value for Mo17 x B73: '.003345' Biased in favor of strain: 'B73' |
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| GRMZM2G056145 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 2 | 1 | 50.00% | 33.33% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G056145 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 2 | 0 | 60.00% | 0.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G056122 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.44492 x 10-1 | 34 | 18 | 27 | 46 | 65.38% | 63.01% | 52 | 73 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.844492' χ2 p-value for Mo17 x B73: '.5079166' Biased in favor of strain: '' |
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| GRMZM2G056122 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.5117 x 10-3 | 128 | 84 | 154 | 81 | 60.38% | 34.47% | 212 | 235 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0025117' χ2 p-value for Mo17 x B73: '1.92e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G056120 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.075784 x 10-1 | 111 | 93 | 138 | 89 | 54.41% | 39.21% | 204 | 227 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2075784' χ2 p-value for Mo17 x B73: '.001145' Biased in favor of strain: '' |
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| GRMZM2G056120 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.772785 x 10-1 | 16 | 9 | 9 | 13 | 64.00% | 59.09% | 25 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7772785' χ2 p-value for Mo17 x B73: '.4509822' Biased in favor of strain: '' |
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| GRMZM2G056116 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.385779 x 10-1 | 20 | 4 | 12 | 18 | 83.33% | 60.00% | 24 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832676' χ2 p-value for Mo17 x B73: '.4385779' Biased in favor of strain: '' |
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| GRMZM2G056116 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 7 | 3 | 2 | 36.36% | 40.00% | 11 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3657123' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G056099 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.429876 x 10-1 | 162 | 187 | 169 | 158 | 46.42% | 48.32% | 349 | 327 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.180825' χ2 p-value for Mo17 x B73: '.5429876' Biased in favor of strain: '' |
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| GRMZM2G056099 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.0991 x 10-3 | 130 | 100 | 102 | 53 | 56.52% | 34.19% | 230 | 155 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0010991' χ2 p-value for Mo17 x B73: '9.80e-18' Biased in favor of strain: '' |
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| GRMZM2G056093 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 6.61941 x 10-2 | 11 | 1 | 0 | 17 | 91.67% | 100.00% | 12 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0661941' χ2 p-value for Mo17 x B73: '.0035515' Biased in favor of strain: '' |
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| GRMZM2G056093 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.4568 x 10-3 | 304 | 211 | 195 | 137 | 59.03% | 41.27% | 515 | 332 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000417' χ2 p-value for Mo17 x B73: '.0014568' Biased in favor of strain: 'B73' |
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| GRMZM2G056088 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 0 | 1 | 0.00% | 100.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G056088 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 1 | 0.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G056081 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.06 x 10-12 | 729 | 212 | 330 | 363 | 77.47% | 52.38% | 941 | 693 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.06e-12' χ2 p-value for Mo17 x B73: '1.49e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G056081 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1395 | 794 | 1273 | 701 | 63.73% | 35.51% | 2189 | 1974 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.11e-38' χ2 p-value for Mo17 x B73: '6.28e-38' Biased in favor of strain: 'B73' |