Displaying data sets 27701 - 27800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G19221 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19221 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19220 APL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.01075 x 10-1 58 34 15 27 63.04% 64.29% 92 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '292.282'
Avg. expression score in LCM sample: '77.943'
Tissue used: 'pure endosperm, no chalazal'
AT5G19220 APL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.66807 x 10-1 70 35 26 67 66.67% 72.04% 105 93 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '307.75'
Avg. expression score in LCM sample: '77.943'
Tissue used: 'full endosperm'
AT5G19220 APL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.21401 x 10-1 88 68 23 24 56.41% 51.06% 156 47 TAIR8 Avg. embryo expression (dissected): '616.857'
Avg. embryo expression (LCM): '393.247'
AT5G19220 APL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.24461 x 10-1 15 5 75.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19220 APL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.11776 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19220 APL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 2 0 100.00% 0.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.20791'
Avg. expression score in LCM sample: '.896573'
Tissue used: 'pure endosperm, no chalazal'
AT5G19210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 1 1 0 85.71% 0.00% 7 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.59357'
Avg. expression score in LCM sample: '.896573'
Tissue used: 'full endosperm'
AT5G19210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 3.34842 x 10-1 7 2 0 0 77.78% 9 0 TAIR8 Avg. embryo expression (dissected): '4.63385'
Avg. embryo expression (LCM): '9.20544'
AT5G19210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.77778 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19200 TSC10B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.75761 x 10-1 24 26 3 41 48.00% 93.18% 50 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057484'
Avg. expression score for this sample: '35.9135'
Avg. expression score in LCM sample: '34.2608'
Tissue used: 'pure endosperm, no chalazal'
AT5G19200 TSC10B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1107 x 10-2 64 21 18 71 75.29% 79.78% 85 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057484'
Avg. expression score for this sample: '43.7134'
Avg. expression score in LCM sample: '34.2608'
Tissue used: 'full endosperm'
AT5G19200 TSC10B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.1066 x 10-2 11 22 12 1 33.33% 7.69% 33 13 TAIR8 Avg. embryo expression (dissected): '26.0704'
Avg. embryo expression (LCM): '17.7704'
AT5G19200 TSC10B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.83935 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19200 TSC10B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.676 x 10-3 160 92 63.49% 252 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19200 TSC10B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.0 x 10-9 157 8 95.15% 165 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.771172'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.65847'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G19190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '5.54123'
Avg. embryo expression (LCM): '1.88379'
AT5G19190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19180 ECR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.42843 x 10-1 129 52 79 111 71.27% 58.42% 181 190 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012753'
Avg. expression score for this sample: '101.51'
Avg. expression score in LCM sample: '235.99'
Tissue used: 'pure endosperm, no chalazal'
AT5G19180 ECR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.077 x 10-3 315 124 178 504 71.75% 73.90% 439 682 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012753'
Avg. expression score for this sample: '167.517'
Avg. expression score in LCM sample: '235.99'
Tissue used: 'full endosperm'
AT5G19180 ECR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.4688 x 10-1 222 185 54 48 54.55% 47.06% 407 102 TAIR8 Avg. embryo expression (dissected): '176.145'
Avg. embryo expression (LCM): '266.656'
AT5G19180 ECR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6153 x 10-2 129 32 80.12% 161 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19180 ECR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9 x 10-7 3396 976 77.68% 4372 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19180 ECR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.17219 x 10-1 1264 527 70.58% 1791 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.62107 x 10-1 24 8 10 3 75.00% 23.08% 32 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.135013'
Avg. expression score for this sample: '60.4425'
Avg. expression score in LCM sample: '136.867'
Tissue used: 'pure endosperm, no chalazal'
AT5G19175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.23648 x 10-1 3 1 16 11 75.00% 40.74% 4 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.135013'
Avg. expression score for this sample: '23.9615'
Avg. expression score in LCM sample: '136.867'
Tissue used: 'full endosperm'
AT5G19175 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '2.35078'
Avg. embryo expression (LCM): '0'
AT5G19175 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19175 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.61464 x 10-1 9 12 42.86% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19175 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.031 x 10-3 17 2 89.47% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19172 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '275.583'
Avg. expression score in LCM sample: '223.849'
Tissue used: 'pure endosperm, no chalazal'
AT5G19172 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '199.231'
Avg. expression score in LCM sample: '223.849'
Tissue used: 'full endosperm'
AT5G19172 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '14.3965'
Avg. embryo expression (LCM): '0'
AT5G19172 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19172 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19172 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.635117'
Avg. expression score for this sample: '4.0258'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.23077 x 10-1 5 0 1 2 100.00% 66.67% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.635117'
Avg. expression score for this sample: '2.86461'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G19170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 6 1 1 0 85.71% 0.00% 7 1 TAIR8 Avg. embryo expression (dissected): '10.5252'
Avg. embryo expression (LCM): '6.85698'
AT5G19170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.35468 x 10-1 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19160 TBL11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '31.5691'
Avg. expression score in LCM sample: '17.0055'
Tissue used: 'pure endosperm, no chalazal'
AT5G19160 TBL11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '55.7442'
Avg. expression score in LCM sample: '17.0055'
Tissue used: 'full endosperm'
AT5G19160 TBL11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '30.0902'
Avg. embryo expression (LCM): '37.6381'
AT5G19160 TBL11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19160 TBL11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19160 TBL11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19151 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.67474 x 10-1 17 24 4 20 41.46% 83.33% 41 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.562909'
Avg. expression score for this sample: '211.965'
Avg. expression score in LCM sample: '154.519'
Tissue used: 'pure endosperm, no chalazal'
AT5G19151 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.25299 x 10-1 96 36 40 98 72.73% 71.01% 132 138 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.562909'
Avg. expression score for this sample: '326.386'
Avg. expression score in LCM sample: '154.519'
Tissue used: 'full endosperm'
AT5G19151 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.50034 x 10-1 7 16 3 5 30.43% 62.50% 23 8 TAIR8 Avg. embryo expression (dissected): '140.219'
Avg. embryo expression (LCM): '189.986'
AT5G19151 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.08698 x 10-1 13 3 81.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19151 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.64601 x 10-1 101 41 71.13% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19151 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.6 x 10-5 80 10 88.89% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '19.3883'
Avg. expression score in LCM sample: '18.3577'
Tissue used: 'pure endosperm, no chalazal'
AT5G19150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '40.7026'
Avg. expression score in LCM sample: '18.3577'
Tissue used: 'full endosperm'
AT5G19150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '20.1229'
Avg. embryo expression (LCM): '24.9162'
AT5G19150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19140 AILP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.79386 x 10-1 402 289 236 632 58.18% 72.81% 691 868 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.557769'
Avg. expression score for this sample: '3411.83'
Avg. expression score in LCM sample: '276.953'
Tissue used: 'pure endosperm, no chalazal'
AT5G19140 AILP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.70914 x 10-1 661 454 366 1072 59.28% 74.55% 1115 1438 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.557769'
Avg. expression score for this sample: '2612.41'
Avg. expression score in LCM sample: '276.953'
Tissue used: 'full endosperm'
AT5G19140 AILP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.79507 x 10-1 186 198 41 82 48.44% 66.67% 384 123 TAIR8 Avg. embryo expression (dissected): '1661.57'
Avg. embryo expression (LCM): '349.769'
AT5G19140 AILP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.1 x 10-5 118 23 83.69% 141 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19140 AILP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.76 x 10-4 56 8 87.50% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19140 AILP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.131 x 10-3 80 18 81.63% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.88673 x 10-1 60 16 35 64 78.95% 64.65% 76 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010612'
Avg. expression score for this sample: '119.43'
Avg. expression score in LCM sample: '90.9213'
Tissue used: 'pure endosperm, no chalazal'
AT5G19130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.799 x 10-3 94 35 22 102 72.87% 82.26% 129 124 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010612'
Avg. expression score for this sample: '166.712'
Avg. expression score in LCM sample: '90.9213'
Tissue used: 'full endosperm'
AT5G19130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.8041 x 10-1 69 42 14 10 62.16% 41.67% 111 24 TAIR8 Avg. embryo expression (dissected): '158.876'
Avg. embryo expression (LCM): '93.7623'
AT5G19130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.49313 x 10-1 28 7 80.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 103 35 74.64% 138 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.3 x 10-9 154 9 94.48% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 31 10 8 7 75.61% 46.67% 41 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001552'
Avg. expression score for this sample: '263.856'
Avg. expression score in LCM sample: '199.906'
Tissue used: 'pure endosperm, no chalazal'
AT5G19120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.93 x 10-4 44 9 12 79 83.02% 86.81% 53 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001552'
Avg. expression score for this sample: '245.767'
Avg. expression score in LCM sample: '199.906'
Tissue used: 'full endosperm'
AT5G19120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 15 3 3 50.00% 50.00% 30 6 TAIR8 Avg. embryo expression (dissected): '220.11'
Avg. embryo expression (LCM): '73.4551'
AT5G19120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.72113 x 10-1 17 3 85.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.1066 x 10-2 116 46 71.60% 162 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.65 x 10-4 232 18 92.80% 250 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.947291'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 4 2 0 0 66.67% 6 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.0399'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G19110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '2.65284'
Avg. embryo expression (LCM): '1.82099'
AT5G19110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.66667 x 10-1 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.7012'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G19100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.247082'
Avg. embryo expression (LCM): '0'
AT5G19100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G19095 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G19095 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'